rna984, rna984 (mRNA) Nannochloropsis gaditana

Overview
Namerna984
Unique Namerna984
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2374
Alignment locationCM002456.1:901192..902130 -

Link to JBrowse

Properties
Property NameValue
Productn-carbamoylsarcosine amidase
Orig transcript idgnl|cribi|Naga_100114g8.2472.mrna
Orig protein idgnl|cribi|Naga_100114g8.2472
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:901192..902130 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100114g8gene947Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29687.1cds983Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna984rna984-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna984 ID=rna984|Name=rna984|organism=Nannochloropsis gaditana|type=mRNA|length=2374bp
AAGCCCCCCACGCAAGGAAGGTGAGCTGCCAGTGCGCAAATTCATCGACG
TTGCGCAGAACATGTGAGTTTTCACGCCTCTTATTGGCGTTCAATCGCCC
AAGCGTCCATCTCGTACCTAGACATCAAGAACAACCTCCTCACCTATCTC
AGGCCTCCTCCCCTATTGCGGCAAAAAGCACAGGGCCGCAAATGGATGCG
TTGCTGGAAGAGATGTACATGGCACAGCGAGGAGGATCTACTAGTTATGC
ACACAAAGATATCAAGGCGCCAGAGACAGAAGAAGGCCCTGAAGAAGACG
CGGGCGACAATCCTACTTGTGCTGCATCGTCCTCGACTCCCTCTCTATGG
CGACCCGAAGTAAAGCCCCCGATGGACGCCTTGCACCACGCTAAAACCTA
TAATAGCGCCCAAAACATGATGCATCAGCCCAGTCTCAGCTTAGAGATAC
TCCGACACGACGCCATCGGTACTTTGACGTGTTTTTTCCTCAACAAGGTG
AACAGGGACCTGGGCATGGATTTGCGCGTGCCCCTCTTTGAACGCTGGCT
CTTCTCCCAGCGTCCCACTGATGGCACCGGGGATCCTATATTGCCAGACC
CGCGATTAAACAACGAACATGAGCGAGCTGGCCGACACTTGCTCATGCGA
GAGCTGATCGAGGGAGGGGCTAGCAACGATACGGCGAAGCGAGTGATAGA
GCAGTTGAATAAAACCGCGGTCAAGCTCTTATGTCGGATACAAAGGGCTT
CCGCGTCCCTCAATCCCCCTTCCGTATCTCTAGAGGCACGATGGCAGTCC
TTGTCTAAAATATATGTGCATTTCGACGCGGGACGTGGGCTCTACTCACT
CCGACACAAGTCGAAAACTGTGACAGTCAACCGAAGGCATTACGAGAAGC
TTCGAGCACTCCACGCCCGCTTTGGGGGAATGTCAATCAATAGGCCTGGG
ATCGATCGCTCTCAAGGCAACCTTAAGCACGGAAAACGAGAACGCCCGGG
AAAGAGCGCTGAAGAAGAGAGGTTCTTCCATCTGCGGGTCTTCCTCCTCC
TCTTGCGCTACAGCAGTCTGGCGGGGGGCACAGATCGCGGAGGGGGCTTT
CAAGGCGCCATTAACGAGGAAGCCTTCGACGTCCTACGCCGTCACCTGGA
TTGTCGGATGGAATGCTTCGCCTCTCCCCTCAACTGCATGTACGCCCGTT
ATTGCTCCGCCTTCCAGGACACGGATGCCTGCTTCGGGAGCTTGGGGACA
TTTTTCAATTTCCGCCCCCGGCAAGGAACCTACGAGGCCAACCCGCCTTT
CTCGCCCTGTGTCATCGCCCGCATGGTCGACCACATGGAGGACTTGCTCG
AGGCAACCGCCCTGCCCCTCGGCTTCGTCGTGGTCATTCCCGCATGGCAG
GACGGAAAGGGGGAGCGGACAAGGGAGGACGAGGAGAAGGGGGTTACTAG
AGAAGCAGAAGAAGAGCGCCCTGAATCGACGCGTGTGACCGCATCAAAGG
GTGCCAGCATGTCTAGGGAGCCGAACAAGAGGGGAGCCAAGGCCATCTAC
AAGGCCTCGGCGGCGTCGTGGAGCCGCCTCCGCGAGAGCTCGTTCTGCGC
CCTTCACGTCCTGCTCCGGGCGCAAGATCACGGGTACATCGAGGGCGGGC
AGCACAAGACGCCCACCCGATTCAAGACGTCCTTCTTTGACACCTCGGTC
TTCTTCTTGCAGAACGCGGCGGCAAAGAGGAAGTGGCCGGCCTCGGAGCG
CATGGCGGAAGAGCTGAAGCAGGCGTGCGCGTCCAAGCATGAGGCAGAGA
CGGCCGCTCGGCGGAGAGATCAAGGCCTAGATCAAAGGACGGAGCGTGGA
GCAAGGCTAAGGGAAGGGTGCGAAGAAGATGGCGAGGTACCAGAGGCGTC
GTCGGAGAGCAACGCTTTTGAGGGAGAGGGAGGCAGGGGTCCAGTGGAGT
GCGCGACGCAGCAGGGATCACGCCCGCCTTCTTGGAAGAGGGCGGGTGCT
CCGAGTAGCATGTTGTATCAAAAGGATGCCTTGAGCTCGAGCAAAAAGAA
AAGATCAGCGCGACATGAAAAGCGTGGCTCCAATAGCACAGCGGCAAGAA
GTTGATCTGTGATGCACTACGAAGAGACTTGTCGCCCAAAGGAACACCCC
AAAATATAATCTCCTCCCTGGAGCGTTGAGCTTCGAGTAAATGCACTCGG
GCTTCAAATTTAATTGGTACGATTTTTCAAAATAAGCTTTGCCGCTTCAT
TGTTCACGATTTTTTATGTACATGCTTGCAGCTTCCTCGTCCCAGACCTC
AGCGTACTTCGCCTTAATATCGAACAAATTAGACTCGTGGACCTGATTAT
GTCGATCACCAACCGCATCCTCAA
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protein sequence of rna984

>rna984-protein ID=rna984-protein|Name=rna984|organism=Nannochloropsis gaditana|type=polypeptide|length=217bp
MAAASGLNKEGSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLY
AGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKI
FEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLI
AGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYA
EVWDEEAASMYIKNREQ
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mRNA from alignment at CM002456.1:901192..902130-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna984 ID=rna984|Name=rna984|organism=Nannochloropsis gaditana|type=mRNA|length=939bp|location=Sequence derived from alignment at CM002456.1:901192..902130- (Nannochloropsis gaditana)
TAAACCTTCGCGGATCAGGATTGCGCCGCAAATTTCGAATAAAAGCACTG AAAACACCCACTCCGACAGAACTGTCGTCTTTTTTTGTCGGTAATTCGAC TACTATGGCCGCTGCTTCAGGCTTGAACAAGGAAGGGAGCTTGGCAGACA ACATCAGAGGCGTGTTCGACGGTGCCCTCCAACCCGGAGCACGGCCATGT CTTTTGATAATCGACTTCGTCCAGGCTTATCTGAAGAAGGACTCCCCACT TTACGCTGGTGTAGAAGATGCTTTGGCTTCAACGAAGCGTTTGCTAGCTC TTGCGAGGCGTCAGCGGCTCCCTGTGGTTCATACAAGGGTTGAATTCTTG CCAGGCGGATTAGATGGTGGCATCTTCTTCCGCAAACTACCCCTTCTTAA AATTTTTGAGAAAGGATCACCTATGGGAAACTTTCATCCAGATGTCATGC CCCTTCCGAATGAAGTTATCGTAACGAAGCAATATGCTAGCGCCTTTTTC GGAACCTCCCTGGCGCCAACCCTCAGAGCTCAAGGAGTCGACACCGTGCT TATTGCGGGACTCTCGACGTCCGGATGCGTCCGCGCCACAGCAACAGATG CGTGCCAACACGGCTTCATTCCAATCGTTGTTGAGGATGCGGTTGGTGAT CGACATAATCAGGTCCACGAGTCTAATTTGTTCGATATTAAGGCGAAGTA CGCTGAGGTCTGGGACGAGGAAGCTGCAAGCATGTACATAAAAAATCGTG AACAATGAAGCGGCAAAGCTTATTTTGAAAAATCGTACCAATTAAATTTG AAGCCCGAGTGCATTTACTCGAAGCTCAACGCTCCAGGGAGGAGATTATA TTTTGGGGTGTTCCTTTGGGCGACAAGTCTCTTCGTAGTGCATCACAGAT CAACTTCTTGCCGCTGTGCTATTGGAGCCACGCTTTTCA
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Coding sequence (CDS) from alignment at CM002456.1:901192..902130-

>rna984 ID=rna984|Name=rna984|organism=Nannochloropsis gaditana|type=CDS|length=654bp|location=Sequence derived from alignment at CM002456.1:901192..902130- (Nannochloropsis gaditana)
ATGGCCGCTGCTTCAGGCTTGAACAAGGAAGGGAGCTTGGCAGACAACAT
CAGAGGCGTGTTCGACGGTGCCCTCCAACCCGGAGCACGGCCATGTCTTT
TGATAATCGACTTCGTCCAGGCTTATCTGAAGAAGGACTCCCCACTTTAC
GCTGGTGTAGAAGATGCTTTGGCTTCAACGAAGCGTTTGCTAGCTCTTGC
GAGGCGTCAGCGGCTCCCTGTGGTTCATACAAGGGTTGAATTCTTGCCAG
GCGGATTAGATGGTGGCATCTTCTTCCGCAAACTACCCCTTCTTAAAATT
TTTGAGAAAGGATCACCTATGGGAAACTTTCATCCAGATGTCATGCCCCT
TCCGAATGAAGTTATCGTAACGAAGCAATATGCTAGCGCCTTTTTCGGAA
CCTCCCTGGCGCCAACCCTCAGAGCTCAAGGAGTCGACACCGTGCTTATT
GCGGGACTCTCGACGTCCGGATGCGTCCGCGCCACAGCAACAGATGCGTG
CCAACACGGCTTCATTCCAATCGTTGTTGAGGATGCGGTTGGTGATCGAC
ATAATCAGGTCCACGAGTCTAATTTGTTCGATATTAAGGCGAAGTACGCT
GAGGTCTGGGACGAGGAAGCTGCAAGCATGTACATAAAAAATCGTGAACA
ATGA
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Synonyms
Publications