EWM29687.1, cds983 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29687.1 vs. NCBI_GenBank
Match: gi|585112263|gb|EWM29687.1| (n-carbamoylsarcosine amidase [Nannochloropsis gaditana]) HSP 1 Score: 448.358 bits (1152), Expect = 1.641e-159 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
Query: 1 MAAASGLNKEGSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIKNREQ 217
MAAASGLNKEGSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIKNREQ
Sbjct: 1 MAAASGLNKEGSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIKNREQ 217
BLAST of EWM29687.1 vs. NCBI_GenBank
Match: gi|553194282|ref|XP_005855920.1| (isochorismatase hydrolase, partial [Nannochloropsis gaditana CCMP526] >gi|422293141|gb|EKU20441.1| isochorismatase hydrolase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 449.129 bits (1154), Expect = 2.834e-159 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
Query: 1 MAAASGLNKEGSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIKNREQ 217
MAAASGLNKEGSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIKNREQ
Sbjct: 33 MAAASGLNKEGSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIKNREQ 249
BLAST of EWM29687.1 vs. NCBI_GenBank
Match: gi|930018670|ref|WP_054122960.1| (isochorismatase [Novosphingobium sp. AAP93] >gi|929698349|gb|KPF80613.1| isochorismatase [Novosphingobium sp. AAP93]) HSP 1 Score: 248.44 bits (633), Expect = 1.556e-80 Identity = 119/203 (58.62%), Postives = 151/203 (74.38%), Query Frame = 0
Query: 11 GSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIK 213
G +A N G FDG+L G RP +++ID V+AYL+ SPLYAG+E A+ S RL+A+AR+ PV T VE+ PGG DGG+FFRK+P LK+FEKGSP+G F P + P + ++TK+YASAFF T LA TL + GVDT+LI G+STSGCVRATA DACQ GF+P VV DA GDRH HE+NLFD++AKYAEV EE A +++
Sbjct: 6 GEIAANYTGAFDGSLPFGKRPAIIVIDMVEAYLQPGSPLYAGIEAAVESAARLVAVARQCGAPVFFTNVEYQPGGADGGVFFRKVPALKVFEKGSPLGAFPPQLSPEDGDFVITKRYASAFFATHLAATLTSLGVDTLLITGVSTSGCVRATALDACQSGFLPFVVRDACGDRHPGPHEANLFDLQAKYAEVVSEERAITHLQ 208
BLAST of EWM29687.1 vs. NCBI_GenBank
Match: gi|1119408701|ref|WP_072384318.1| (isochorismatase [Novosphingobium sp. NDB2Meth1]) HSP 1 Score: 248.44 bits (633), Expect = 2.000e-80 Identity = 119/203 (58.62%), Postives = 151/203 (74.38%), Query Frame = 0
Query: 11 GSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIK 213
G +A N G FDG+L G RP +++ID V+AYL+ SPLYAG+E A+ S RL+A+AR+ PV T VE+ PGG DGG+FFRK+P LK+FEKGSP+G F P + P + ++TK+YASAFF T LA TL + GVDT+LI G+STSGCVRATA DACQ GF+P VV DA GDRH HE+NLFD++AKYAEV EE A +++
Sbjct: 6 GEIAANYTGAFDGSLPFGKRPAIIVIDMVEAYLQPGSPLYAGIEAAVESAARLVAVARQCGAPVFFTNVEYQPGGADGGVFFRKVPALKVFEKGSPLGAFPPQLSPEDGDFVITKRYASAFFATHLAATLTSIGVDTLLITGVSTSGCVRATALDACQSGFLPFVVRDACGDRHPGPHEANLFDLQAKYAEVVSEERAITHLQ 208
BLAST of EWM29687.1 vs. NCBI_GenBank
Match: gi|820803549|ref|WP_046764805.1| (isochorismatase [Sphingobium chungbukense] >gi|820039792|gb|KKW91290.1| isochorismatase [Sphingobium chungbukense]) HSP 1 Score: 247.284 bits (630), Expect = 4.675e-80 Identity = 124/196 (63.27%), Postives = 146/196 (74.49%), Query Frame = 0
Query: 13 LADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAA 208
LA N G FDG+L+PG R LLIID V+AYL S LYA EDALAS +RLLA AR +PV+ T VE+ GG+DGG FFRK+P LK F KGSP+G F + P +E++VTKQYASAFFGTSLA TL + GVDT+LI G STSGCVRA+A DA QHGFIP V+ DA DRH HE+NLFD++AKYAEV E+AA
Sbjct: 5 LAANYAGAFDGSLRPGRRIALLIIDVVRAYLDPASSLYARAEDALASNQRLLAAARTAEVPVIFTNVEYQAGGMDGGRFFRKVPALKAFVKGSPLGAFPETLQPRSDEIVVTKQYASAFFGTSLAATLTSLGVDTLLITGFSTSGCVRASAVDALQHGFIPFVIRDACADRHPGPHEANLFDLQAKYAEVVGEQAA 200
BLAST of EWM29687.1 vs. NCBI_GenBank
Match: gi|550930118|ref|WP_022678580.1| (MULTISPECIES: isochorismatase [Novosphingobium] >gi|929671731|gb|KPF54612.1| isochorismatase [Novosphingobium sp. AAP1]) HSP 1 Score: 246.514 bits (628), Expect = 7.661e-80 Identity = 120/192 (62.50%), Postives = 143/192 (74.48%), Query Frame = 0
Query: 11 GSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEV 202
G L N G FDG L G RP LL++D V+AYL+ SPLYAG+E ALAS R+ A AR LPV+ T VE+ PGG DGG+F+RK+P LK+FEKGSP+G F + P +V++TK+YASAFF T LA TL A GVDTVLI G STSGC+RATA DACQHGF+P VV DA GDRH HE+NLFD++AKYAEV
Sbjct: 6 GDLDANYAGAFDGRLPFGQRPGLLLVDLVEAYLQPGSPLYAGIEAALASAVRITAAARAAGLPVIFTNVEYQPGGADGGVFYRKVPALKVFEKGSPLGAFPAVLSPQAGDVVITKRYASAFFATHLAATLTAMGVDTVLICGTSTSGCIRATALDACQHGFVPFVVADACGDRHPAPHEANLFDLQAKYAEV 197
BLAST of EWM29687.1 vs. NCBI_GenBank
Match: gi|661300606|ref|WP_029993360.1| (isochorismatase [Sphingomonas sp. YL-JM2C]) HSP 1 Score: 244.973 bits (624), Expect = 3.352e-79 Identity = 119/204 (58.33%), Postives = 149/204 (73.04%), Query Frame = 0
Query: 11 GSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIKN 214
G L DN RG FDG L G+ P LLI+D +AY++ SPLY G +DAL S +RL+A AR +PVV TRV + PGG DGG+F+RK+P L+ F++G P+G+F + PLP E++VTKQYAS+FFGTSLA +LRA G+DT+LI G STSGCVRATA DA Q+ F P VV DA GDRH HE+NLFD++AKYAEV E A I +
Sbjct: 3 GDLTDNYRGAFDGRLPFGSAPALLIVDVARAYVEPGSPLYVGNDDALRSNERLIAAARAAGVPVVFTRVVYQPGGADGGLFYRKVPALRCFQEGEPLGDFPASIQPLPGELVVTKQYASSFFGTSLASSLRANGIDTLLITGYSTSGCVRATALDALQNSFSPFVVRDACGDRHPSPHEANLFDLQAKYAEVIGEPEALQLIAS 206
BLAST of EWM29687.1 vs. NCBI_GenBank
Match: gi|662139330|ref|WP_030090738.1| (isochorismatase [Sphingomonas sp. DC-6] >gi|1193152112|gb|ARR55146.1| isochorismatase [Sphingomonas sp. DC-6]) HSP 1 Score: 244.588 bits (623), Expect = 6.049e-79 Identity = 118/204 (57.84%), Postives = 149/204 (73.04%), Query Frame = 0
Query: 11 GSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIKN 214
G L DN RG FDG L G+ P LL++D +AY++ SPLY G +DAL S +RL+A AR +PVV TRV + PGG DGG+F+RK+P L+ F++G P+G+F + PLP E++VTKQYAS+FFGTSLA +LRA G+DT+LI G STSGCVRATA DA Q+ F P VV DA GDRH HE+NLFD++AKYAEV E A I +
Sbjct: 3 GDLTDNYRGAFDGRLPFGSAPALLVVDVARAYVEPGSPLYVGNDDALRSNERLIAAARAAGVPVVFTRVVYQPGGADGGLFYRKVPALRCFQEGEPLGDFPASIQPLPGELVVTKQYASSFFGTSLASSLRANGIDTLLITGYSTSGCVRATALDALQNSFSPFVVRDACGDRHPSPHEANLFDLQAKYAEVIGEPEALQLIAS 206
BLAST of EWM29687.1 vs. NCBI_GenBank
Match: gi|1011978488|ref|WP_062783930.1| (isochorismatase [Novosphingobium capsulatum]) HSP 1 Score: 243.047 bits (619), Expect = 2.319e-78 Identity = 119/195 (61.03%), Postives = 142/195 (72.82%), Query Frame = 0
Query: 11 GSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDE 205
G L N G FDG L G RP LL++D V+AYL+ SPLYAG+E AL S R+ A AR LPV+ T VE+ PGG DGG+F+RK+P LK FEKGSP+G F + P +V++TK+YASAFF T LA TL A GVDTVLI G STSGC+RATA DACQHGF+P VV DA GDRH H++NLFD++AKYAEV E
Sbjct: 6 GDLDANYAGAFDGRLPFGQRPGLLLVDLVEAYLQPGSPLYAGIESALESAVRITAAARAAGLPVIFTNVEYQPGGADGGVFYRKVPALKAFEKGSPLGAFPAVLAPQDGDVVITKRYASAFFATHLAATLTAMGVDTVLICGTSTSGCIRATALDACQHGFLPFVVADACGDRHPAPHQANLFDLQAKYAEVVSE 200
BLAST of EWM29687.1 vs. NCBI_GenBank
Match: gi|499763102|ref|WP_011443836.1| (isochorismatase [Novosphingobium aromaticivorans] >gi|87133880|gb|ABD24622.1| isochorismatase hydrolase [Novosphingobium aromaticivorans DSM 12444] >gi|1081516999|emb|SCY22571.1| Nicotinamidase-related amidase [Novosphingobium stygium]) HSP 1 Score: 242.662 bits (618), Expect = 2.884e-78 Identity = 117/206 (56.80%), Postives = 147/206 (71.36%), Query Frame = 0
Query: 8 NKEGSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIK 213
E LA N G FDG L G P L+++D V+AYL+ SPLYAG+E AL S RL AR +PV+ T VE+ PGG DGG+F+RK+P L++FEKGSP+G F + P +E+++TK+YASAFF T LA TL + GVDTVLI G STSGC+RATA DACQHGF+P VV DA GDRH HE+NLFD++AKYAEV E A +++
Sbjct: 3 QHEDDLAANYAGAFDGRLPFGQCPALVVVDLVEAYLQPGSPLYAGIEAALESAVRLTDAARNAGIPVIFTNVEYQPGGTDGGVFYRKVPALRVFEKGSPLGAFPAVLSPREDEIVITKRYASAFFATHLASTLTSLGVDTVLICGTSTSGCIRATALDACQHGFLPFVVRDACGDRHQAPHEANLFDLQAKYAEVIGEAEALAFLR 208 The following BLAST results are available for this feature:
BLAST of EWM29687.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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