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Properties
| Property Name | Value |
|---|
| Product | Calycin |
| Orig transcript id | gnl|cribi|Naga_100700g3.6423.mrna |
| Orig protein id | gnl|cribi|Naga_100700g3.6423 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:213555..215857 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9831 ID=rna9831|Name=rna9831|organism=Nannochloropsis gaditana|type=mRNA|length=1730bp
CCTAAATTCTACTCACACATGCATACAGACAAGCATTTGATTTTTTAGAA
AAATGGCTACTGAGATGCGGATGCGTCCTACTGAAGCTGACAGATACGGC
CCGTAGAAGGTGTAGTCAAGTAATTGACACCTGCATGATGAACAGCACCC
TGGCGAGTACCCGCTCTACTGTCCCGGCCTGGGAAAGTCGTACAGATCAA
GCATCAAGCACCACCGACGGGAGCGCAGATGACCATTTCTCCACTCTTTC
CCCCACTTCCCACAACTCTGAAGCGAAAGGAAACTTTTTTTCGCGGGTGG
AGAATCGGAGGAAGGGTGGGGAGCTCGTCCCAGGAGGCAAAGCAGTCGCC
ATGACCTGCTTGACCAGCATACCAGAAAGACATGGACCACACAGCGACAA
TGCCGCCGGCCTTCGCCATGTTTTCACAAAGCAAGGCAACAACAACAACA
GTAGCAACGAGACGGGCGATCGGTGGACGGGTACGGACTCACACCCCGGC
ATCAATCAGTCCCACGTCCACGCCCATGTTGCCCCACCCTCTGCGGCTCC
CGCATCGAAGACATCGGCCTCCTCCTCCACTCCTTCCGCCCCTTCCTCCC
CCCCTTCTTCTTCCGCCGCTCTCTTGGCCATGCGATTGCTTCCTTCCCAC
CTGCATCGCCGCCGAGACTCTCCTGATGGTGCCAACGCGGCCTTCCCCCT
CTCCGATCCACACATGCACGAGAAAGTCCGCGCAGGAACCGCGCTTCTCC
ATGCATCTTCCCCAACCCCAGAGCACTCTTTGGAAAAATCGTCTCGGACA
AGGCCTGTGAGAGCAATTTTGCCTGAGTCGGGGGAATGGATGGCATCTCC
GCTCCCTCCCTTCGGGACCGAGCCACCTCCGGCTTCCTCGCCACCTCTTC
TATTGCCCCGCCTTCCGCCCGCCCGCCCGCCCTCCATCCCTCCTCCCCTC
TCTTCGCTTTATATCGTCTCTATCCGCATCATCGGCCACAGGATCAGCCA
CTCGACGCAAGAGGAGGTCCTCTTCGAGTCCTTCCCTCCCACCCTCCCTA
GCCGCTCTGGGCGCAAGCACGTGGTGTATGTCATCAAGGTCCTAACCGTT
GAGGGCCGTTACTGGCTCTTGGAGCGCCGATTCGCCGATTTTTTCCTCCT
CCATTCCCTTCTCGAGTCTCAGGGTCGAATCCAGGCAGCTGAGGCGGAGG
GACGGCCACGCAAATTGAGACCGGCAGCTCAAGCGCAGGAAGGGGAGGAA
GGCAAAGATGACGACGGATCCGAAAGGCTCATGCAGCGACATGCACAACA
ACAGCCGTCCGTAGAGGAGCAGGTCGTGCCCAAAGGGAAGGGAGGGGGGC
GGGCGGGTGTCTTCCCCCGGAGGCGTCTCCTCGGGCATTTCCTGCCCTGG
GTAATCGAGGAACGGAGGCGGGCCCTGGAACGCTGCCTGCAGAGATGGGT
GGGGGGGAGGACGGGGGGAGGGGAGGGAGGCCCAGCGGGACGGAGGGCCC
TTCGGCTGTTTTTGGAGGTGGATCGCTACTGTCAGAAGCCGAGAAAGGGG
GCCGGGGTTGGGGGGGAGGAGGGGAGGGGGAGGGGCCCAGCCAGGGAAAC
ACCCTTGGCGTTTCTTCCGTCGATGGAAAGGCTTCCTTCCACCTTTCTTC
GCCCCTTTCTTTCGATTTTTGGGTCTATCGCCTGCCCATCCACCTGCCTG
GCTGGATCCCCTCGAGCCCTTGCCCCGTAA back to topprotein sequence of rna9831 >rna9831-protein ID=rna9831-protein|Name=rna9831|organism=Nannochloropsis gaditana|type=polypeptide|length=252bp
MDAIAPIALLLSHQSGYLNHAVDTILPIYTMGVICLVLTLHRQYQPETSS
AIAVAEDAYLVVFEREQLQAARFKEAQHRQEQQKAKEKEGENGRGQEGGK
GAVLPQGSQSLDYSGVWKSVPSKNVNYEEFLSVQGVPYLKRKIATSTVVT
HIIKQEGDTLHLEVQPLDMKTTFDIGGPPSTSYIGKKAFADRMTRDEEGS
LVLVKTNEEDGMEITAVRSLKEGGKVLVMEQTVRNLKDGKETHAEQTFEK
AD back to topmRNA from alignment at KK037256.1:213555..215857- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9831 ID=rna9831|Name=rna9831|organism=Nannochloropsis gaditana|type=mRNA|length=2303bp|location=Sequence derived from alignment at KK037256.1:213555..215857- (Nannochloropsis gaditana)
GCCGATTGTTACAAGCACCCAGTCACATAAAATCCTTCAATAGCTTTTGG
GTGGCGCGTATTGTATGATCTCACAACTTACTTGTGTGCCCAGGGAGTGG
AGGAATGTGATAAATTTGCGTCCTGTCACACTTTTCTATACACCCGTTCC
TCCAGCATGATGTATTTGGTAGGTCCCGCTTACCAACAGGGTGTGCGGCC
ATCTGTGAAAGGGGATGCGTGAATTGCACTGCTGTATCGCCTTGTGTGCT
TCGTTAGCGTGGAAAATCGACATTTTACTGTTTTTGGGGCGTCCAGGCGG
CTATCATTTTTTTTAACACCCCCTGACCGCCTGTCATCGAGAATCCTCGT
GGCGGCAGCATGGGCCAAGCTCTCGTTTCACGTCCGTCCTAAAAGCCACA
TGTACACGCCTCCAGTCATCTTTCTTCCCACTATTCAGAAAAACAACTCC
AAGCACGTCCCCGGCAACAGGTACTCGTGATTGCCGGTGTCGAGCCTTCC
CTGGTACTCCGAAACGAATTTCTGCCTAAGAGGAGAAAAGCTGACTTTCA
GTCGGTAGCCCTCCTTCCTCCCTCAGCCTTGGTCACATCTGTCAAGCCTC
AGGGTCTACTCATCAGTCATGGACGCAATTGCTCCAATTGCGCTCCTTTT
GAGTCACCAGTCGGGGTACCTGAACCACGCCGTCGACACCATTCTGCCGG
TATACCCCTTGCCTCTCCCTCCCCCCTCCTTCCCTCCCTGCTTCCTTCCC
TCTTCCTTGTAATCTGTCTTCTTGCTCGCTCTTGACGTGCGCCTCTCACC
CCATCCTCACCCAGATCTACACCATGGGCGTCATTTGTCTCGTGCTGACC
TTGCACCGGCAATACCAGCCGGAAACGTCGTCGGCCATCGCTGTTGCCGA
GGACGCCTACTTGGTGGTGTTCGAGCGCGAGCAATTGCAAGCAGCCCGGT
TCAAAGAAGCTCAGCATCGACAGGAGCAGCAAAAGGCCAAGGAGAAAGAG
GGAGAGAATGGAAGGGGGCAGGAGGGAGGGAAGGGGGCGGTTCTCCCTCA
AGGTAGCCAATCGCTTGATTACAGCGGGGTGTGGAAATCGGTCCCGAGCA
AAAACGTGAATTACGAAGAGTTTTTGAGCGTGCAAGGCGTACCGTACCTG
AAACGGAAGATTGCAACGTCCACGGTGGTCACGCACATCATCAAGCAGGA
GGGAGACACTCTTCATTTGGAGGTGAGGCGCCCAGGCACCTGTCCCCTTC
TCTCTCCTGGATTCCCCTCTCCATTCTGCCTTAACCCCCCTCCCTCCCTC
TCTCTCTCCCTCCCTCCCTCCCTCCCTTCGCTCCTTTCCGTCTTGCGTTT
CCTCCTTTTCTTTTAGGTCCAGCCACTTGACATGAAGACCACTTTTGACA
TAGGAGGCCCACCTAGGTATGTCGCTGTTTCCTCCCTCTTTGCCTTCTTC
CCTCTCCTTCCTCCATCCCTCCTTCTCTTAATCCCTTTCTTTTACCTACT
CATTCGCGTGGCTTGCCTCTCCCCCTTCTCTCCCTATTGACTTTCCCCCA
CCCTTTATGTACCGTTTCCAGTACCTCGTACATTGGAAAGAAGGCGTTTG
CAGATCGGATGACGCGGGACGAGGAAGGCTCCTTGGTCTTGGTGAAGACG
AACGAGGAGGACGGCATGGAAATCACTGCGGTGCGCTCCCTAAAGGAAGG
GGGGAAAGTGCTGGTCATGGTAAGGAAGAGGCTTTCTGGAGGGACTCGAT
AGAAAAGAGGGCATGCGGATTGACCCCTTCACTTTCGTTTCTTATGACGG
TGTTTTTTCTCCTCCGTATTTCCCTCCTCGCCGTGGCGCGTGTCGATGTG
CTCTTGCAGGAGCAAACCGTCAGGAACCTGAAGGACGGAAAGGAGACTCA
TGCGGAGCAGACATTTGAAAAGGCTGATTAGGTAGGGTTTCCGTTGAGAG
AGGGGAAGGAAATTAAGGTGTGTTCATATGGGGAAAGCGACGGGCTCGCG
GGACGTAGGAATGCATTATGTATACTTGATTTTGAAAGATGTTTTTCTCC
CAAAGCTGTGTACGCTAGTATTTCGATAACAAACTGAAGATGCGAGTGGT
GATTTTGTATGTTTTTCGTCTGTCTTTTTCTGTTGCTTCATGTCGCTCAA
GCCAAGCTCTTAGCATCGCTTCCACGAGTCTCCCACCATGTCAAGTACCG
TGTAATGTCATCGGCGCCCGAAATATTCTACTTTTATTTTGAAAATTTGA
GAACCAATAAATCCGGAAAACTGAAAGAAGAAAAGGAAAGCGGTCCCGGC
AAT back to topCoding sequence (CDS) from alignment at KK037256.1:213555..215857- >rna9831 ID=rna9831|Name=rna9831|organism=Nannochloropsis gaditana|type=CDS|length=3795bp|location=Sequence derived from alignment at KK037256.1:213555..215857- (Nannochloropsis gaditana)
GAGCAAACCGTCAGGAACCTGAAGGACGGAAAGGAGACTCATGCGGAGCA
GACATTTGAAAAGGCTGATTAGTACCTCGTACATTGGAAAGAAGGCGTTT
GCAGATCGGATGACGCGGGACGAGGAAGGCTCCTTGGTCTTGGTGAAGAC
GAACGAGGAGGACGGCATGGAAATCACTGCGGTGCGCTCCCTAAAGGAAG
GGGGGAAAGTGCTGGTCATGGTCCAGCCACTTGACATGAAGACCACTTTT
GACATAGGAGGCCCACCTAGATCTACACCATGGGCGTCATTTGTCTCGTG
CTGACCTTGCACCGGCAATACCAGCCGGAAACGTCGTCGGCCATCGCTGT
TGCCGAGGACGCCTACTTGGTGGTGTTCGAGCGCGAGCAATTGCAAGCAG
CCCGGTTCAAAGAAGCTCAGCATCGACAGGAGCAGCAAAAGGCCAAGGAG
AAAGAGGGAGAGAATGGAAGGGGGCAGGAGGGAGGGAAGGGGGCGGTTCT
CCCTCAAGGTAGCCAATCGCTTGATTACAGCGGGGTGTGGAAATCGGTCC
CGAGCAAAAACGTGAATTACGAAGAGTTTTTGAGCGTGCAAGGCGTACCG
TACCTGAAACGGAAGATTGCAACGTCCACGGTGGTCACGCACATCATCAA
GCAGGAGGGAGACACTCTTCATTTGGAGATGGACGCAATTGCTCCAATTG
CGCTCCTTTTGAGTCACCAGTCGGGGTACCTGAACCACGCCGTCGACACC
ATTCTGCCGGAGCAAACCGTCAGGAACCTGAAGGACGGAAAGGAGACTCA
TGCGGAGCAGACATTTGAAAAGGCTGATTAGTACCTCGTACATTGGAAAG
AAGGCGTTTGCAGATCGGATGACGCGGGACGAGGAAGGCTCCTTGGTCTT
GGTGAAGACGAACGAGGAGGACGGCATGGAAATCACTGCGGTGCGCTCCC
TAAAGGAAGGGGGGAAAGTGCTGGTCATGGTCCAGCCACTTGACATGAAG
ACCACTTTTGACATAGGAGGCCCACCTAGATCTACACCATGGGCGTCATT
TGTCTCGTGCTGACCTTGCACCGGCAATACCAGCCGGAAACGTCGTCGGC
CATCGCTGTTGCCGAGGACGCCTACTTGGTGGTGTTCGAGCGCGAGCAAT
TGCAAGCAGCCCGGTTCAAAGAAGCTCAGCATCGACAGGAGCAGCAAAAG
GCCAAGGAGAAAGAGGGAGAGAATGGAAGGGGGCAGGAGGGAGGGAAGGG
GGCGGTTCTCCCTCAAGGTAGCCAATCGCTTGATTACAGCGGGGTGTGGA
AATCGGTCCCGAGCAAAAACGTGAATTACGAAGAGTTTTTGAGCGTGCAA
GGCGTACCGTACCTGAAACGGAAGATTGCAACGTCCACGGTGGTCACGCA
CATCATCAAGCAGGAGGGAGACACTCTTCATTTGGAGATGGACGCAATTG
CTCCAATTGCGCTCCTTTTGAGTCACCAGTCGGGGTACCTGAACCACGCC
GTCGACACCATTCTGCCGGAGCAAACCGTCAGGAACCTGAAGGACGGAAA
GGAGACTCATGCGGAGCAGACATTTGAAAAGGCTGATTAGTACCTCGTAC
ATTGGAAAGAAGGCGTTTGCAGATCGGATGACGCGGGACGAGGAAGGCTC
CTTGGTCTTGGTGAAGACGAACGAGGAGGACGGCATGGAAATCACTGCGG
TGCGCTCCCTAAAGGAAGGGGGGAAAGTGCTGGTCATGGTCCAGCCACTT
GACATGAAGACCACTTTTGACATAGGAGGCCCACCTAGATCTACACCATG
GGCGTCATTTGTCTCGTGCTGACCTTGCACCGGCAATACCAGCCGGAAAC
GTCGTCGGCCATCGCTGTTGCCGAGGACGCCTACTTGGTGGTGTTCGAGC
GCGAGCAATTGCAAGCAGCCCGGTTCAAAGAAGCTCAGCATCGACAGGAG
CAGCAAAAGGCCAAGGAGAAAGAGGGAGAGAATGGAAGGGGGCAGGAGGG
AGGGAAGGGGGCGGTTCTCCCTCAAGGTAGCCAATCGCTTGATTACAGCG
GGGTGTGGAAATCGGTCCCGAGCAAAAACGTGAATTACGAAGAGTTTTTG
AGCGTGCAAGGCGTACCGTACCTGAAACGGAAGATTGCAACGTCCACGGT
GGTCACGCACATCATCAAGCAGGAGGGAGACACTCTTCATTTGGAGATGG
ACGCAATTGCTCCAATTGCGCTCCTTTTGAGTCACCAGTCGGGGTACCTG
AACCACGCCGTCGACACCATTCTGCCGGAGCAAACCGTCAGGAACCTGAA
GGACGGAAAGGAGACTCATGCGGAGCAGACATTTGAAAAGGCTGATTAGT
ACCTCGTACATTGGAAAGAAGGCGTTTGCAGATCGGATGACGCGGGACGA
GGAAGGCTCCTTGGTCTTGGTGAAGACGAACGAGGAGGACGGCATGGAAA
TCACTGCGGTGCGCTCCCTAAAGGAAGGGGGGAAAGTGCTGGTCATGGTC
CAGCCACTTGACATGAAGACCACTTTTGACATAGGAGGCCCACCTAGATC
TACACCATGGGCGTCATTTGTCTCGTGCTGACCTTGCACCGGCAATACCA
GCCGGAAACGTCGTCGGCCATCGCTGTTGCCGAGGACGCCTACTTGGTGG
TGTTCGAGCGCGAGCAATTGCAAGCAGCCCGGTTCAAAGAAGCTCAGCAT
CGACAGGAGCAGCAAAAGGCCAAGGAGAAAGAGGGAGAGAATGGAAGGGG
GCAGGAGGGAGGGAAGGGGGCGGTTCTCCCTCAAGGTAGCCAATCGCTTG
ATTACAGCGGGGTGTGGAAATCGGTCCCGAGCAAAAACGTGAATTACGAA
GAGTTTTTGAGCGTGCAAGGCGTACCGTACCTGAAACGGAAGATTGCAAC
GTCCACGGTGGTCACGCACATCATCAAGCAGGAGGGAGACACTCTTCATT
TGGAGATGGACGCAATTGCTCCAATTGCGCTCCTTTTGAGTCACCAGTCG
GGGTACCTGAACCACGCCGTCGACACCATTCTGCCGGAGCAAACCGTCAG
GAACCTGAAGGACGGAAAGGAGACTCATGCGGAGCAGACATTTGAAAAGG
CTGATTAGTACCTCGTACATTGGAAAGAAGGCGTTTGCAGATCGGATGAC
GCGGGACGAGGAAGGCTCCTTGGTCTTGGTGAAGACGAACGAGGAGGACG
GCATGGAAATCACTGCGGTGCGCTCCCTAAAGGAAGGGGGGAAAGTGCTG
GTCATGGTCCAGCCACTTGACATGAAGACCACTTTTGACATAGGAGGCCC
ACCTAGATCTACACCATGGGCGTCATTTGTCTCGTGCTGACCTTGCACCG
GCAATACCAGCCGGAAACGTCGTCGGCCATCGCTGTTGCCGAGGACGCCT
ACTTGGTGGTGTTCGAGCGCGAGCAATTGCAAGCAGCCCGGTTCAAAGAA
GCTCAGCATCGACAGGAGCAGCAAAAGGCCAAGGAGAAAGAGGGAGAGAA
TGGAAGGGGGCAGGAGGGAGGGAAGGGGGCGGTTCTCCCTCAAGGTAGCC
AATCGCTTGATTACAGCGGGGTGTGGAAATCGGTCCCGAGCAAAAACGTG
AATTACGAAGAGTTTTTGAGCGTGCAAGGCGTACCGTACCTGAAACGGAA
GATTGCAACGTCCACGGTGGTCACGCACATCATCAAGCAGGAGGGAGACA
CTCTTCATTTGGAGATGGACGCAATTGCTCCAATTGCGCTCCTTTTGAGT
CACCAGTCGGGGTACCTGAACCACGCCGTCGACACCATTCTGCCG back to top
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