rna9830, rna9830 (mRNA) Nannochloropsis gaditana

Overview
Namerna9830
Unique Namerna9830
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length568
Alignment locationKK037256.1:211038..213065 -

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Properties
Property NameValue
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100700g1.6422.mrna
Orig protein idgnl|cribi|Naga_100700g1.6422
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:211038..213065 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100700g1gene9543Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20873.1cds9799Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9830rna9830-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9830 ID=rna9830|Name=rna9830|organism=Nannochloropsis gaditana|type=mRNA|length=568bp
CCTCCCTCCAGCACCCATGCTGGCTACACCCAGGCAGTGGACTGGTGGAG
TCTGGGCACCGTCTGCTTCGAAATGCTCTACGGCTCCCCGCCATTCTACG
ACCCAAACTTCTCAAAGATGTGCAATAAAATCTTGCGGCAGCCGTTGCGG
TTCCCTCGGCGCCCCCCCCCCCCGCCTGGACACGGAGGGAGGGCGGAGGA
AGGGAGAGGAGCGCGAGCGGAAGAGGGAGAGGGGAAGGGCCGGAGCCAGG
GAGGGGAGACAGGAACGCCATGCCCTCCCCGCAGGAGCTTAAGGAAGCGC
AGGCCTTCCTGCGGGGTCTCCTGGAGAAATCTCCCGCCCGACGAATCGGC
ACCGTCCAGCCCGCCCACCCCCCTTCCATGGTCCTTCCCCCTTCCCCACT
CCTTCGTCCCTCCCGCCCCGCTCCTTCCCGAATGCAATCCCCCCGTAACT
TGATTGGTGAAGGTACCTTAAGCCTCGACCCCCTCGACATTCGGGCACAC
CCCTTCTTTGCCAAGATGGATTGGACGGCATTGGAAAACCGACGGCTGCC
CCCCCCGCAGCGACTGCC
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protein sequence of rna9830

>rna9830-protein ID=rna9830-protein|Name=rna9830|organism=Nannochloropsis gaditana|type=polypeptide|length=531bp
MMNSTLASTRSTVPAWESRTDQASSTTDGSADDHFSTLSPTSHNSEAKGN
FFSRVENRRKGGELVPGGKAVAMTCLTSIPERHGPHSDNAAGLRHVFTKQ
GNNNNSSNETGDRWTGTDSHPGINQSHVHAHVAPPSAAPASKTSASSSTP
SAPSSPPSSSAALLAMRLLPSHLHRRRDSPDGANAAFPLSDPHMHEKVRA
GTALLHASSPTPEHSLEKSSRTRPVRAILPESGEWMASPLPPFGTEPPPA
SSPPLLLPRLPPARPPSIPPPLSSLYIVSIRIIGHRISHSTQEEVLFESF
PPTLPSRSGRKHVVYVIKVLTVEGRYWLLERRFADFFLLHSLLESQGRIQ
AAEAEGRPRKLRPAAQAQEGEEGKDDDGSERLMQRHAQQQPSVEEQVVPK
GKGGGRAGVFPRRRLLGHFLPWVIEERRRALERCLQRWVGGRTGGGEGGP
AGRRALRLFLEVDRYCQKPRKGAGVGGEEGRGRGPARETPLAFLPSMERL
PSTFLRPFLSIFGSIACPSTCLAGSPRALAP
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mRNA from alignment at KK037256.1:211038..213065-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9830 ID=rna9830|Name=rna9830|organism=Nannochloropsis gaditana|type=mRNA|length=2028bp|location=Sequence derived from alignment at KK037256.1:211038..213065- (Nannochloropsis gaditana)
CCTAAATTCTACTCACACATGCATACAGACAAGCATTTGATTTTTTAGAA
AAATGGCTACTGAGATGCGGATGCGTCCTACTGAAGCTGACAGATACGGC
CCGTAGAAGGTGTAGTCAAGTAATTGACACCTGGTAAGAGGCAAGAAGCA
CATAATTTGGCCATGTTCAGGTATTTGAAATTAGCGTCCTAGCTCAAACA
TACATATTGATAGTAATCGATCATTTTGTCACCCAAAATTCACGTGACTT
TGCTTTGAAATGGGTTGGACCAGAGGAATGCGAACACCCGGTCGTGACGC
CTACATATACTTCTGCAATATGTTCTTTTAAAGACATGGATGGAGGCCAC
ATGGGCCTATCCTGTTCAGATGACATATCGTCTGATACTAAGACCGCTCA
CATCCCGACTGCATTCTCCTTACGTCCCCAGCATGATGAACAGCACCCTG
GCGAGTACCCGCTCTACTGTCCCGGCCTGGGAAAGTCGTACAGATCAAGC
ATCAAGCACCACCGACGGGAGCGCAGATGACCATTTCTCCACTCTTTCCC
CCACTTCCCACAACTCTGAAGCGAAAGGAAACTTTTTTTCGCGGGTGGAG
AATCGGAGGAAGGGTGGGGAGCTCGTCCCAGGAGGCAAAGCAGTCGCCAT
GACCTGCTTGACCAGCATACCAGAAAGACATGGACCACACAGCGACAATG
CCGCCGGCCTTCGCCATGTTTTCACAAAGCAAGGCAACAACAACAACAGT
AGCAACGAGACGGGCGATCGGTGGACGGGTACGGACTCACACCCCGGCAT
CAATCAGTCCCACGTCCACGCCCATGTTGCCCCACCCTCTGCGGCTCCCG
CATCGAAGACATCGGCCTCCTCCTCCACTCCTTCCGCCCCTTCCTCCCCC
CCTTCTTCTTCCGCCGCTCTCTTGGCCATGCGATTGCTTCCTTCCCACCT
GCATCGCCGCCGAGACTCTCCTGATGGTGCCAACGCGGCCTTCCCCCTCT
CCGATCCACACATGCACGAGAAAGTCCGCGCAGGAACCGCGCTTCTCCAT
GCATCTTCCCCAACCCCAGAGCACTCTTTGGAAAAATCGTCTCGGACAAG
GCCTGTGAGAGCAATTTTGCCTGAGTCGGGGGAATGGATGGCATCTCCGC
TCCCTCCCTTCGGGACCGAGCCACCTCCGGCTTCCTCGCCACCTCTTCTA
TTGCCCCGCCTTCCGCCCGCCCGCCCGCCCTCCATCCCTCCTCCCCTCTC
TTCGCTTTATATCGTCTCTATCCGCATCATCGGCCACAGGATCAGCCACT
CGACGCAAGAGGAGGTCCTCTTCGAGTCCTTCCCTCCCACCCTCCCTAGC
CGCTCTGGGCGCAAGCACGTGGTGTATGTCATCAAGGTCCTAACCGTTGA
GGGCCGTTACTGGCTCTTGGAGCGCCGATTCGCCGATTTTTTCCTCCTCC
ATTCCCTTCTCGAGTCTCAGGGTCGAATCCAGGCAGCTGAGGCGGAGGGA
CGGCCACGCAAATTGAGACCGGCAGCTCAAGCGCAGGAAGGGGAGGAAGG
CAAAGATGACGACGGATCCGAAAGGCTCATGCAGCGACATGCACAACAAC
AGCCGTCCGTAGAGGAGCAGGTCGTGCCCAAAGGGAAGGGAGGGGGGCGG
GCGGGTGTCTTCCCCCGGAGGCGTCTCCTCGGGCATTTCCTGCCCTGGGT
AATCGAGGAACGGAGGCGGGCCCTGGAACGCTGCCTGCAGAGATGGGTGG
GGGGGAGGACGGGGGGAGGGGAGGGAGGCCCAGCGGGACGGAGGGCCCTT
CGGCTGTTTTTGGAGGTGGATCGCTACTGTCAGAAGCCGAGAAAGGGGGC
CGGGGTTGGGGGGGAGGAGGGGAGGGGGAGGGGCCCAGCCAGGGAAACAC
CCTTGGCGTTTCTTCCGTCGATGGAAAGGCTTCCTTCCACCTTTCTTCGC
CCCTTTCTTTCGATTTTTGGGTCTATCGCCTGCCCATCCACCTGCCTGGC
TGGATCCCCTCGAGCCCTTGCCCCGTAA
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Coding sequence (CDS) from alignment at KK037256.1:211038..213065-

>rna9830 ID=rna9830|Name=rna9830|organism=Nannochloropsis gaditana|type=CDS|length=1596bp|location=Sequence derived from alignment at KK037256.1:211038..213065- (Nannochloropsis gaditana)
ATGATGAACAGCACCCTGGCGAGTACCCGCTCTACTGTCCCGGCCTGGGA
AAGTCGTACAGATCAAGCATCAAGCACCACCGACGGGAGCGCAGATGACC
ATTTCTCCACTCTTTCCCCCACTTCCCACAACTCTGAAGCGAAAGGAAAC
TTTTTTTCGCGGGTGGAGAATCGGAGGAAGGGTGGGGAGCTCGTCCCAGG
AGGCAAAGCAGTCGCCATGACCTGCTTGACCAGCATACCAGAAAGACATG
GACCACACAGCGACAATGCCGCCGGCCTTCGCCATGTTTTCACAAAGCAA
GGCAACAACAACAACAGTAGCAACGAGACGGGCGATCGGTGGACGGGTAC
GGACTCACACCCCGGCATCAATCAGTCCCACGTCCACGCCCATGTTGCCC
CACCCTCTGCGGCTCCCGCATCGAAGACATCGGCCTCCTCCTCCACTCCT
TCCGCCCCTTCCTCCCCCCCTTCTTCTTCCGCCGCTCTCTTGGCCATGCG
ATTGCTTCCTTCCCACCTGCATCGCCGCCGAGACTCTCCTGATGGTGCCA
ACGCGGCCTTCCCCCTCTCCGATCCACACATGCACGAGAAAGTCCGCGCA
GGAACCGCGCTTCTCCATGCATCTTCCCCAACCCCAGAGCACTCTTTGGA
AAAATCGTCTCGGACAAGGCCTGTGAGAGCAATTTTGCCTGAGTCGGGGG
AATGGATGGCATCTCCGCTCCCTCCCTTCGGGACCGAGCCACCTCCGGCT
TCCTCGCCACCTCTTCTATTGCCCCGCCTTCCGCCCGCCCGCCCGCCCTC
CATCCCTCCTCCCCTCTCTTCGCTTTATATCGTCTCTATCCGCATCATCG
GCCACAGGATCAGCCACTCGACGCAAGAGGAGGTCCTCTTCGAGTCCTTC
CCTCCCACCCTCCCTAGCCGCTCTGGGCGCAAGCACGTGGTGTATGTCAT
CAAGGTCCTAACCGTTGAGGGCCGTTACTGGCTCTTGGAGCGCCGATTCG
CCGATTTTTTCCTCCTCCATTCCCTTCTCGAGTCTCAGGGTCGAATCCAG
GCAGCTGAGGCGGAGGGACGGCCACGCAAATTGAGACCGGCAGCTCAAGC
GCAGGAAGGGGAGGAAGGCAAAGATGACGACGGATCCGAAAGGCTCATGC
AGCGACATGCACAACAACAGCCGTCCGTAGAGGAGCAGGTCGTGCCCAAA
GGGAAGGGAGGGGGGCGGGCGGGTGTCTTCCCCCGGAGGCGTCTCCTCGG
GCATTTCCTGCCCTGGGTAATCGAGGAACGGAGGCGGGCCCTGGAACGCT
GCCTGCAGAGATGGGTGGGGGGGAGGACGGGGGGAGGGGAGGGAGGCCCA
GCGGGACGGAGGGCCCTTCGGCTGTTTTTGGAGGTGGATCGCTACTGTCA
GAAGCCGAGAAAGGGGGCCGGGGTTGGGGGGGAGGAGGGGAGGGGGAGGG
GCCCAGCCAGGGAAACACCCTTGGCGTTTCTTCCGTCGATGGAAAGGCTT
CCTTCCACCTTTCTTCGCCCCTTTCTTTCGATTTTTGGGTCTATCGCCTG
CCCATCCACCTGCCTGGCTGGATCCCCTCGAGCCCTTGCCCCGTAA
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Synonyms
Publications