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Properties
| Property Name | Value |
|---|
| Product | amp-dependent synthetase and ligase |
| Orig transcript id | gnl|cribi|Naga_100498g1.5815.mrna |
| Orig protein id | gnl|cribi|Naga_100498g1.5815 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:199845..200709 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9826 ID=rna9826|Name=rna9826|organism=Nannochloropsis gaditana|type=mRNA|length=1439bp
GGAAAGGGGAGAGGGGGCAGGAGCCTGGACACCACTGAGCTGGCCGTAGG
CGCTATCCGAGACCTCGGCATCAGCACGCTCGTATTGGTGCCGACCATGC
TCTCGAAGCTGCTGGCGGCGGTCGAGGGCGGGGGGGAGGGAGGGAGGGAA
GGTACCTCCGTCCTTCCTTCCATCAGCTTCCTTCTGGTCGGGGGGCAAGC
CCTTCCTCTCCCTCTCTTCCTCCGGGCGCGGGCCTCCATGCCCCAGGCCC
GCGTCTTTCAGAGCTATGCCTGCTCGGAGGCGTGCTCCAGCATCTCTTTC
CTCCCCCTCGCCCTCCCTCCCGCCCTCCCTCCCCCTCTCCCTCCCCCTGG
CTCCCTCGGGCATCCAGCGCCCGGCGTGGAGGTAGCGCTCTTGGATGTGG
AAGGGCGTGAGGAGGATCGAGGGGCGGACAGGGAGAGGGCGGGAAGAGAG
GGGAGGTTCGGTCCAACCGTGCCGTCCCCTTCTGCTCCTCCAGACTCATC
CTCCTCCACCGAAACGCGACGACCGGGGCCTGGCCTGCGTCCCCGAATTT
TCGTCGACAAAGTCGGGAAAGTGGGGGAGATTGCGACCCGAGGCCCCCAC
CTCATGAACGGTTACTGGCGTCGACCCGGTGCAACGGCCGCAGTACTGGT
CTACCCTCAGCTCTCTCCTGCCTCCCTCCCTGGTTCTCCTCCCCTCCCAC
CCCTCCTCCTCCCTTCGAGGCCGCCCACGGGCACGCAGGCATTCGGAACA
CCAAAGAAAGGAGGAAAACGAGGTGGACGAAGCGGCGGAAGAGAAGCTTC
GGGGGAAACAGAGGGCCCCTGGCTCTGCACGGGCGATCTAGGGGTGATGG
ATCCGGACGGGAGGTTCCGCCTGGTGGGCAGGTTGGCCGACGTGATTCGC
ACGGGGGCCGAGAAAGTGATGTCCTCGGAGGTGGAAGGCGTGCTGCAGAT
GCACCACTGCGTCGAGTCCGCCGCGGTGGTAGGCATGCCCGACGATGTGT
TTGGAGAGAAGGTGGTGGCCGTGGTGGTGCTCAGGGAGGGCGCGGGGGAC
GGACAGGGGGCGGTGAAGGAGGAGCTCGTGAGGCACTGTCGACGGCACCT
GGCTGGGTTCAAAGTGCCACGAGAGTTTGAATTCAGACAGGTTCTCCCCG
TGACGGGTAGCGGGAAGGTGAATAAACATATGGTAAGGGCGGGGCTAAGA
AAGGGAAGCCAGGAGAGCAAGGCATCCGGCCTGCCTGCTGGGTTGCGATC
CGCTTTATAAACAGGTAGCCATCGGACGTGTTGATATGACCTGACTGGGC
AACGCCTATGAAGAAGGAAATGCAAATGGGGATGTCAGATTAGGGCGTCA
TGAATGCCTTGAGCACATCCATCTTCAACTGCCTCTGGCCACTGCAACTC
CGGCATGGGAAAGAAAAAGCAACCACGTCATAAATGTCC back to topprotein sequence of rna9826 >rna9826-protein ID=rna9826-protein|Name=rna9826|organism=Nannochloropsis gaditana|type=polypeptide|length=264bp
MVVSVSQALHHAASSNPSGVAALTYRGPSQACTKTSYNEFLARTLHVVQA
LSIAFGPHLVAQARVAFLCRNHELLLIYLYAVSELQLIAAPLNTRWGVEE
ISAALRDCDPAMVVCDADLWPLLRPSLGPESERERDTDGLGKKWEREGKG
RSFDREDEGRDPQKQPSMMGFIRGVVLLHARDGGEVEAGVAATRPFLPSP
PPPPPPPPRPPPPLALPFPPRCIASSTRRGARAPPKGSCSATRRNSPKHA
PRSRWGSTTPGPST back to topmRNA from alignment at KK037256.1:199845..200709- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9826 ID=rna9826|Name=rna9826|organism=Nannochloropsis gaditana|type=mRNA|length=865bp|location=Sequence derived from alignment at KK037256.1:199845..200709- (Nannochloropsis gaditana)
ATGGTTGTCTCGGTCTCCCAAGCCCTCCACCATGCCGCGTCGAGTAATCC
TTCCGGGGTCGCAGCCCTCACTTATCGAGGGCCGAGCCAGGCGTGCACCA
AGACAAGCTACAATGAATTCCTAGCACGGACGCTCCACGTCGTACAGGCC
CTGTCCATCGCCTTTGGGCCCCACCTTGTCGCGCAGGCCCGTGTGGCGTT
TTTGTGTCGGAATCACGAGCTTTTGCTCATTTATTTGTATGCTGTCTCGG
AATTGCAGCTCATTGCTGCCCCGCTGAACACGCGCTGGGGCGTGGAGGAG
ATTTCCGCCGCCCTGAGGGATTGTGATCCCGCGATGGTGGTCTGTGACGC
GGATTTGTGGCCGCTTTTGCGCCCAAGTCTGGGGCCCGAATCGGAGAGGG
AGCGGGACACTGATGGATTGGGAAAGAAGTGGGAACGCGAGGGAAAAGGA
AGAAGCTTCGACCGAGAGGATGAGGGAAGGGACCCTCAGAAACAGCCATC
GATGATGGGTTTCATCCGGGGTGTCGTGTTGCTGCACGCCCGCGACGGGG
GGGAGGTTGAGGCGGGAGTCGCGGGTGAGGGATGTGGAAGCTGTGGACGG
AGAGAGCCCTTCTCTCTCCCCTCCCGCTCCATCCGCTCCATCAGCCACGA
GGCCCTTCTTGCCCTCACCACCGCCCCCTCCTCCTCCTCCTCCCCGTCCC
CCTCCCCCTCTGGCCCTGCCCTTCCCGCCGAGGTGCATTGCCTCATCTAC
ACGTCGGGGAGCACGGGCACCCCCAAAGGGGTCATGCTCAGCCACGCGGC
GCAACTCGCCCAAGCACGCACCAAGATCACGCTGGGGAAGTACCACCCCG
GGACCGTCTACTTGA back to topCoding sequence (CDS) from alignment at KK037256.1:199845..200709- >rna9826 ID=rna9826|Name=rna9826|organism=Nannochloropsis gaditana|type=CDS|length=1590bp|location=Sequence derived from alignment at KK037256.1:199845..200709- (Nannochloropsis gaditana)
CCACGAGGCCCTTCTTGCCCTCACCACCGCCCCCTCCTCCTCCTCCTCCC
CGTCCCCCTCCCCCTCTGGCCCTGCCCTTCCCGCCGAGGTGCATTGCCTC
ATCTACACGTCGGGGAGCACGGGCACCCCCAAAGGGGTCATGCTCAGCCA
CGCGGCGCAACTCGCCCAAGCACGCACCAAGATCACGCTGGGGAAGTACC
ACCCCGGGACCGTCTACTTGAATGGTTGTCTCGGTCTCCCAAGCCCTCCA
CCATGCCGCGTCGAGTAATCCTTCCGGGGTCGCAGCCCTCACTTATCGAG
GGCCGAGCCAGGCGTGCACCAAGACAAGCTACAATGAATTCCTAGCACGG
ACGCTCCACGTCGTACAGGCCCTGTCCATCGCCTTTGGGCCCCACCTTGT
CGCGCAGGCCCGTGTGGCGTTTTTGTGTCGGAATCACGAGCTTTTGCTCA
TTTATTTGTATGCTGTCTCGGAATTGCAGCTCATTGCTGCCCCGCTGAAC
ACGCGCTGGGGCGTGGAGGAGATTTCCGCCGCCCTGAGGGATTGTGATCC
CGCGATGGTGGTCTGTGACGCGGATTTGTGGCCGCTTTTGCGCCCAAGTC
TGGGGCCCGAATCGGAGAGGGAGCGGGACACTGATGGATTGGGAAAGAAG
TGGGAACGCGAGGGAAAAGGAAGAAGCTTCGACCGAGAGGATGAGGGAAG
GGACCCTCAGAAACAGCCATCGATGATGGGTTTCATCCGGGGTGTCGTGT
TGCTGCACGCCCGCGACGGGGGGGAGGTTGAGGCGGGAGTCGCGGCCACG
AGGCCCTTCTTGCCCTCACCACCGCCCCCTCCTCCTCCTCCTCCCCGTCC
CCCTCCCCCTCTGGCCCTGCCCTTCCCGCCGAGGTGCATTGCCTCATCTA
CACGTCGGGGAGCACGGGCACCCCCAAAGGGGTCATGCTCAGCCACGCGG
CGCAACTCGCCCAAGCACGCACCAAGATCACGCTGGGGAAGTACCACCCC
GGGACCGTCTACTTGAATGGTTGTCTCGGTCTCCCAAGCCCTCCACCATG
CCGCGTCGAGTAATCCTTCCGGGGTCGCAGCCCTCACTTATCGAGGGCCG
AGCCAGGCGTGCACCAAGACAAGCTACAATGAATTCCTAGCACGGACGCT
CCACGTCGTACAGGCCCTGTCCATCGCCTTTGGGCCCCACCTTGTCGCGC
AGGCCCGTGTGGCGTTTTTGTGTCGGAATCACGAGCTTTTGCTCATTTAT
TTGTATGCTGTCTCGGAATTGCAGCTCATTGCTGCCCCGCTGAACACGCG
CTGGGGCGTGGAGGAGATTTCCGCCGCCCTGAGGGATTGTGATCCCGCGA
TGGTGGTCTGTGACGCGGATTTGTGGCCGCTTTTGCGCCCAAGTCTGGGG
CCCGAATCGGAGAGGGAGCGGGACACTGATGGATTGGGAAAGAAGTGGGA
ACGCGAGGGAAAAGGAAGAAGCTTCGACCGAGAGGATGAGGGAAGGGACC
CTCAGAAACAGCCATCGATGATGGGTTTCATCCGGGGTGTCGTGTTGCTG
CACGCCCGCGACGGGGGGGAGGTTGAGGCGGGAGTCGCGG back to top
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