rna9806, rna9806 (mRNA) Nannochloropsis gaditana

Overview
Namerna9806
Unique Namerna9806
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1143
Alignment locationKK037256.1:157155..157872 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102713g1.10071.mrna
Orig protein idgnl|cribi|Naga_102713g1.10071
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:157155..157872 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102713g1gene9521Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20898.1cds9775Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9806rna9806-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9806 ID=rna9806|Name=rna9806|organism=Nannochloropsis gaditana|type=mRNA|length=1143bp
ATGTTCACAGGGCTTGTTCCCAAGCGTGTAGGTCGCGGTGTCAGCTTTTG
TCGATCGCGGGTACGACTTAGATCGCTAGAACTTGTCATCCAGCCTCCCC
GGCGTCTCTTCAAAAGTCGGCTCTCCTGTCACCCTCAAGCATCGTGTGAA
AAAATCCGCGTTGCACGGGTGCGTCCCATACGGAAGTTTGCAGCTTCGCT
ATCCGTAATACACGGGAACGAAGGAGCAAAGAGCTCCATCCCGGACAGTG
CTCCTATACACGGCGGGAGCATGCCGTCCTCCCCCTTTCTTCAAGACCTC
CTTCTCACCCCAGCCACGGCAGTCACCTGCGCCGTATTGGTCGTCATCTG
GTTTTTCCTTTGGAACCACCGCGTGTCCGCCGACAGGGTTGCATTTTCCT
ACACTAACGTGGTGGAAAAAAAGGAATGGTGGCGATGCTTGACCGCGGCC
CATTCACACCTGGACCTGGCGCACATCGGCTTCAACGTGATAGCCCTCTG
GGACTGCCGCTCCGCCGAGCTCTGGTTAGGCCACTGGCGCTTTGCAGTGC
AGTCCCTCGCCCTCGTCGTGCTGTCTAAACTCATCATGCTCGCCGTCGTC
TACTTTGCCTCGTCCTGCCTGCCTGCACCCAGGAGCCGGGCGTGGCAAGA
AGGAGGGTCCGTAGGCTACAGCGCGGTGATATTCGCCTGGATGACCATAC
TGAGCTTCTATGGACCCCCCACGGTCAGTCTTTTGGGCCTGGTGGAGATT
CCGTCCTTGCTGGCCCCCGTGGCCTCCCTCCTCATCACTCAGCTGATTGT
CCGGAGGGCGAGCTTGGTGGGCCACGCCTCTGGGATCGTAGCGGGGCTGA
TCGCGGCCTTGGGGACCTTAGACTGGCTGAACAGTCCCTACTGGGGCGGC
TGCTTCCTCTTCTGGGTAGTGGCCATGCTGGCGATCAGCTTGAAGGCCAC
AACAGGGCTCCCCCTGCCCTGCCTGGAGTACGCGGGCTGGGGGGCAGTGG
GCGGGGAGGAGAGGGCGGGGGTGGGGGAAACGAGCGGGAGGACAGCGGCG
CCGGCCGTGTCGATCTTGTACCCGGAAGGACGTACGCTCGGGGGGGGGGA
AGGTGGAGGGGAAAGGAATGGAGGGGCAGTGGCCTTGGTATGA
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protein sequence of rna9806

>rna9806-protein ID=rna9806-protein|Name=rna9806|organism=Nannochloropsis gaditana|type=polypeptide|length=238bp
PSLPRPGLHRSAHPEAPRRRRRLQSFPARALHRPAWGGRLLERQTPPRQR
HPHPERGDGCHHLRSIPGPDLPEPPPLPASRPFAGTPPGFPSLGLYLSES
GPCCLRAARLLLRRGRLRRALGHCGGPGLGKRGGGDGAGPGGGRLCLLHG
PGEPGVWERALGGGGRASGAGRRQQNVVEGGEGAGERVGEHRGGGARGLR
HLLGFGGQESALRREGGWEGGEEGRREEVRGSCIRGYT
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mRNA from alignment at KK037256.1:157155..157872-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9806 ID=rna9806|Name=rna9806|organism=Nannochloropsis gaditana|type=mRNA|length=718bp|location=Sequence derived from alignment at KK037256.1:157155..157872- (Nannochloropsis gaditana)
CCCTCCCTCCCTCGCCCAGGTCTCCATCGGTCTGCTCATCCGGAAGCGCC
CCGTCGTCGGCGTCGTCTACAATCCTTTCCTGCAAGAGCTCTACACCGCC
CGGCATGGGGGGGGCGCCTTCTTGAACGGCAAACCCCTCCACGTCAGCGC
CACCCCCACCCTGAAAGAGGCGATGGTTGCCACCACCTTAGGAGCATCCC
GGGACCGGACCTACCTGAACCTCCTCCTCTTCCGGCTTCGCGCCCTTTTG
CTGGAACGCCTCCAGGCTTTCCGAGTCTCGGGCTCTACCTGTCAGAATCT
GGCCCATGTTGCCTCCGGGCGGCTCGACTGCTACTACGACGAGGGCGGCT
TCGGAGGGCCCTGGGACATTGCGGCGGGCCTGGTCTTGGTAAGAGAGGCG
GGGGGGACGGTGCGGGCCCTGGGGGGGGGCGACTTTGTCTTCTCCATGGG
CCAGGGGAACCTGGTGTGTGGGAACGCGCACTTGGTGGAGGAGGTCGTGC
AAGCGGTGCGGGCCGCCGACAACAAAATGTGGTGGAAGGGGGTGAGGGTG
CAGGTGAGAGGGTGGGGGAGCATCGGGGCGGTGGTGCTCGGGGCTTGCGT
CATCTCCTTGGTTTTGGGGGGCAGGAAAGCGCGTTAAGGAGGGAAGGAGG
ATGGGAGGGAGGGGAGGAGGGGAGGAGAGAGGAGGTTCGTGGTTCGTGCA
TAAGAGGGTATACATAGA
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Coding sequence (CDS) from alignment at KK037256.1:157155..157872-

>rna9806 ID=rna9806|Name=rna9806|organism=Nannochloropsis gaditana|type=CDS|length=717bp|location=Sequence derived from alignment at KK037256.1:157155..157872- (Nannochloropsis gaditana)
CCCTCCCTCCCTCGCCCAGGTCTCCATCGGTCTGCTCATCCGGAAGCGCC
CCGTCGTCGGCGTCGTCTACAATCCTTTCCTGCAAGAGCTCTACACCGCC
CGGCATGGGGGGGGCGCCTTCTTGAACGGCAAACCCCTCCACGTCAGCGC
CACCCCCACCCTGAAAGAGGCGATGGTTGCCACCACCTTAGGAGCATCCC
GGGACCGGACCTACCTGAACCTCCTCCTCTTCCGGCTTCGCGCCCTTTTG
CTGGAACGCCTCCAGGCTTTCCGAGTCTCGGGCTCTACCTGTCAGAATCT
GGCCCATGTTGCCTCCGGGCGGCTCGACTGCTACTACGACGAGGGCGGCT
TCGGAGGGCCCTGGGACATTGCGGCGGGCCTGGTCTTGGTAAGAGAGGCG
GGGGGGACGGTGCGGGCCCTGGGGGGGGGCGACTTTGTCTTCTCCATGGG
CCAGGGGAACCTGGTGTGTGGGAACGCGCACTTGGTGGAGGAGGTCGTGC
AAGCGGTGCGGGCCGCCGACAACAAAATGTGGTGGAAGGGGGTGAGGGTG
CAGGTGAGAGGGTGGGGGAGCATCGGGGCGGTGGTGCTCGGGGCTTGCGT
CATCTCCTTGGTTTTGGGGGGCAGGAAAGCGCGTTAAGGAGGGAAGGAGG
ATGGGAGGGAGGGGAGGAGGGGAGGAGAGAGGAGGTTCGTGGTTCGTGCA
TAAGAGGGTATACATAG
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Synonyms
Publications