EWM20898.1, cds9775 (CDS) Nannochloropsis gaditana

Overview
NameEWM20898.1
Unique Namecds9775
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:157156..157872 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20898.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102713g1.10071.mrna
GbkeyCDS
End range.
End range157872
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:157156..157872 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20898.1 vs. NCBI_GenBank
Match: gi|585100852|gb|EWM20898.1| (hypothetical protein Naga_102713g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 436.417 bits (1121), Expect = 4.064e-154
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0 
Query:    1 PSLPRPGLHRSAHPEAPRRRRRLQSFPARALHRPAWGGRLLERQTPPRQRHPHPERGDGCHHLRSIPGPDLPEPPPLPASRPFAGTPPGFPSLGLYLSESGPCCLRAARLLLRRGRLRRALGHCGGPGLGKRGGGDGAGPGGGRLCLLHGPGEPGVWERALGGGGRASGAGRRQQNVVEGGEGAGERVGEHRGGGARGLRHLLGFGGQESALRREGGWEGGEEGRREEVRGSCIRGYT 238
            PSLPRPGLHRSAHPEAPRRRRRLQSFPARALHRPAWGGRLLERQTPPRQRHPHPERGDGCHHLRSIPGPDLPEPPPLPASRPFAGTPPGFPSLGLYLSESGPCCLRAARLLLRRGRLRRALGHCGGPGLGKRGGGDGAGPGGGRLCLLHGPGEPGVWERALGGGGRASGAGRRQQNVVEGGEGAGERVGEHRGGGARGLRHLLGFGGQESALRREGGWEGGEEGRREEVRGSCIRGYT
Sbjct:    1 PSLPRPGLHRSAHPEAPRRRRRLQSFPARALHRPAWGGRLLERQTPPRQRHPHPERGDGCHHLRSIPGPDLPEPPPLPASRPFAGTPPGFPSLGLYLSESGPCCLRAARLLLRRGRLRRALGHCGGPGLGKRGGGDGAGPGGGRLCLLHGPGEPGVWERALGGGGRASGAGRRQQNVVEGGEGAGERVGEHRGGGARGLRHLLGFGGQESALRREGGWEGGEEGRREEVRGSCIRGYT 238
The following BLAST results are available for this feature:
BLAST of EWM20898.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100852|gb|EWM20898.1|4.064e-154100.00hypothetical protein Naga_102713g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9806rna9806Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications