rna9801, rna9801 (mRNA) Nannochloropsis gaditana

Overview
Namerna9801
Unique Namerna9801
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1179
Alignment locationKK037256.1:145879..146462 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100156g5.1709.mrna
Orig protein idgnl|cribi|Naga_100156g5.1709
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:145879..146462 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100156g5gene9516Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20902.1cds9770Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9801rna9801-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9801 ID=rna9801|Name=rna9801|organism=Nannochloropsis gaditana|type=mRNA|length=1179bp
ATGGGAATGCTTTCTGCCAAAAAAGCGCGGCGGAGCTCGCCCCCGGGGCC
TCTTCGACCCCCTATGATGGACTTAGACGATGCTTTTTACGCCATGCAGC
AAAAATTACCCAGAAGTGCTTTTGATTTTCTGGCATTCTACAGCTCCGTG
CTCGGCGGTATCGTCACTGACCCGGCCCTAATGACAGTTCCCATGGACGA
GCACATGGTGCATCGAGGACATGCCGTCTTCGATACTGCTAATGTGTCGC
GTGGCTATTGCTACGGCCTGGATTTCCATTTGGAAAGGTTGTTACGGTCT
GCGGGTTTGGCACGCATTCATCCGGCCTTCACGAAGGAAGAACTCCGACA
CATCATACTCAGCACTGTGGCGGCCAGTCAAGTGCGAGACGATATCTTTG
TCCGTTTTTGGATGACATCAGGGCGTGGGAACTTCGCTATCAGCGCGAAA
GAGACGACAAGCAGCGGTTTCTTTGTCATGGTCCATCGCTATCCCTCCAA
AGGTGACCTCAAGCTGCAGGGGATCACCGAGCATGTGGTGGAGGACATCC
CGCTCAAGAACCCCTTGTTGGCGACCATGAAGTCGACCAACTACCTTATC
AACGCCCTCGTCTGCCAAGCCGCCGAGGACAAGGGAGGATTCTTGGGCAT
CCAATTCGAGCCCTCAGGGGCTTTGGCCGAAAGCTCCATCGGCAATGTCG
CGATCCTCACACAGGAAGGGGTGCTACGCACACCCCCCTTCGAGCGTATA
CTGGCCGGCACCACCGTGAAAAGGTTGTGGGAACTGGCCGTAGATTCGTT
ACTCCCGCAAGGCATCGTGTCTGGTGTGGAATACCATCAAATCACCCTTG
CGGAGCTCCTCTCTGCCAAGGAGGCCTTCAGCCTGGGGGGGGGGTCTGTG
CTGCCCATCGTGCGCATTGACGGCCATGTGATAGGGGACGGGAAGCCGGG
GCCCGTTTTCAAGGAACTTGACGCCCTGCTTGTCCGTGACATGGACGTGA
ATTTCCTTGACCCTGTGCCTTACCAAGAGTATACCCAAGGGGGCCTGGTG
CAAAGAGGATGGCGAGGGCTGCAGCGATGGCGGCGGGCGGACGGCTACCT
GATGGGCCTGGTCTTGATCGCCTTGCCCCTCGCGTTCGCCGTGGGGAAAA
TACGCGGAGGCCCAACTTTTATGCTTTGA
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protein sequence of rna9801

>rna9801-protein ID=rna9801-protein|Name=rna9801|organism=Nannochloropsis gaditana|type=polypeptide|length=129bp
MSNCCNLNVSEGSGEDIFLQQLVRLNRQWARSGEREGEENRPLPNCCTTR
CQQRDNAAVDIGSLNHWLKIFRKGSTRVRQPSACTFLKGHVLLLCSTTRP
SAVWEVAKDAFPCWEYKRRTRLPGDMTIF
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mRNA from alignment at KK037256.1:145879..146462-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9801 ID=rna9801|Name=rna9801|organism=Nannochloropsis gaditana|type=mRNA|length=584bp|location=Sequence derived from alignment at KK037256.1:145879..146462- (Nannochloropsis gaditana)
CACGCCACAGCCTTCTCGCCGGAGGAGCTCTTTGATGTGTGTAAGGCAGT
CTGGCTACTCTTCCAGCAGCCGCTGCTCTCTGGGACGGCCCATGCTGAAC
TTCAACTTCTCTTTTCCAAAGCCACCCCAGAAATGCATTCAAGTACCTAC
TGCCTCACGGTAAAAAAATGTCCAATTGCTGTAACTTGAATGTCAGTGAG
GGTAGCGGGGAAGACATTTTCCTGCAACAGCTCGTGCGACTAAATAGGCA
GTGGGCGAGGTCGGGCGAGCGGGAGGGCGAAGAGAACCGCCCACTGCCTA
ACTGCTGCACAACGAGGTGCCAACAGAGAGACAATGCTGCAGTAGATATT
GGTAGTCTTAACCACTGGCTTAAGATCTTTAGGAAAGGAAGCACGCGCGT
GAGACAGCCGTCAGCATGTACGTTTCTAAAGGGCCACGTGCTTTTGTTGT
GTAGCACAACGCGACCTTCTGCCGTGTGGGAGGTGGCGAAGGACGCTTTT
CCGTGTTGGGAGTACAAAAGACGAACTCGCTTACCCGGAGACATGACAAT
TTTTTGAATGAACCCAGCATTCCATTTTCATGAA
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Coding sequence (CDS) from alignment at KK037256.1:145879..146462-

>rna9801 ID=rna9801|Name=rna9801|organism=Nannochloropsis gaditana|type=CDS|length=390bp|location=Sequence derived from alignment at KK037256.1:145879..146462- (Nannochloropsis gaditana)
ATGTCCAATTGCTGTAACTTGAATGTCAGTGAGGGTAGCGGGGAAGACAT
TTTCCTGCAACAGCTCGTGCGACTAAATAGGCAGTGGGCGAGGTCGGGCG
AGCGGGAGGGCGAAGAGAACCGCCCACTGCCTAACTGCTGCACAACGAGG
TGCCAACAGAGAGACAATGCTGCAGTAGATATTGGTAGTCTTAACCACTG
GCTTAAGATCTTTAGGAAAGGAAGCACGCGCGTGAGACAGCCGTCAGCAT
GTACGTTTCTAAAGGGCCACGTGCTTTTGTTGTGTAGCACAACGCGACCT
TCTGCCGTGTGGGAGGTGGCGAAGGACGCTTTTCCGTGTTGGGAGTACAA
AAGACGAACTCGCTTACCCGGAGACATGACAATTTTTTGA
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Synonyms
Publications