rna9797, rna9797 (mRNA) Nannochloropsis gaditana

Overview
Namerna9797
Unique Namerna9797
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1194
Alignment locationKK037256.1:137363..139347 -

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Properties
Property NameValue
ProductBulb-type lectin domain protein
Orig transcript idgnl|cribi|Naga_100156g10.1708.mrna
Orig protein idgnl|cribi|Naga_100156g10.1708
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:137363..139347 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100156g10gene9512Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9797rna9797-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20901.1cds9766Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9797 ID=rna9797|Name=rna9797|organism=Nannochloropsis gaditana|type=mRNA|length=1194bp
TAAAACCGCGCAATCCATGGACACGCCAGTGGTGCAAGACGTGCGCGCGT
ACTGCCCATGTTTGTCAACATCTCGTCTTCTGATTTCATTGGGTCGAAAG
AGCATCAAGGGAACACGAGAACATAAAACTGGCTTCGGACAGGTAGATGC
AAGATGGAGCGGGGATAGCGGAGCCTTCCGAGCCCGCTCTGACATGGTTC
GCGGAACCTGGGAGGGCGCTCGACAGGAGGAGGAGAGTGGTTGACCAACG
CATTGAAATCGCTTCACTTTTTCCGGTGCAGTAGGACACATCTTCGGAAA
TGGCAGAGGATGTCGGAGTCTCGAGTAGTATCTCAGCAGAGTCCAATGGT
CGACAACCATCGCAAGTACTACTTTCCTTCTCAGGAGGGAAGGATTCATC
CATGGCACTGCATGTGCTACGCAATGATCCCAACTTCCATGTAGTGGGTA
TCATGGTTCAAGTAGAGAAAGATAATGACCGCGTGAGCGTGCATGAGGTT
CGAAGGGAATTATTGGATGCTCAAGTTGCCGCCCTTCCCTCCGACTTGAC
CGTTTTCCATGTGTGCCTCCCCGTCATGAGCACCAATTGTCAATATGAAG
GAGCAATTTTTGACTGCTTTGCTGAGGCCCGACAATGTTTTCCTCTTCTG
AAATATGTGGCATTTGGTGACATCTTTTTGGCGGACGTGCGCGACTATCG
CATGGGTGTGCTAGCACGGTGGTCTGGCCATGGTGGTTGTCCTCTCCTTC
CTCTCTTCCCTCTCTGGGGTCGCGACACGACCAGATTGGCGCGTGACTTC
CTTGCGCTGGGATTTCGTGCCCATTTGGTGTGCGTGGATACGACTCAACT
GGACGCTACGTACGTAGGCCGGCAGTATGATGCTGCCTTGCTGGATGACT
TGCCAGCTCACGTGGACCTATGCGGGGAAAAGGGAGAGTTCCACACTTTT
GTCAGCGCCGGACCTGTCTTCTCGTCGACTGTCCCCGTGCAGGTGGGGCA
TGTCGAAAGCAGGGGAACAGCTGGGCGGTTTGCCTATTGCGACTTGGTAC
CGAGGGCAAGGGTGAAGGCGTGAGCGGATGCTTCGGACCCTTGGGAAGCC
CCGTCTTGTGTGGCGAAAGAAGGCAACAATCGTCACAATTCCATGATGTG
AAAAATAAATAGATGAATCATCTGTAGCTTGCAAACCTCTATTT
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protein sequence of rna9797

>rna9797-protein ID=rna9797-protein|Name=rna9797|organism=Nannochloropsis gaditana|type=polypeptide|length=465bp
MGKMIPASDLVTTLFEVARKFLLMQYPYEFEVCLFAFCLGASMRVRPSAQ
YSWLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHY
TRVGGLLQTSPCKFLLVALFEIYRAASILKTVGQATTDIAPGPYYPIAVV
GPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDP
ALPGAYLRGLPALRLSDPENLKALTVFFFVAMAFLSLVKGPDYNPFTPVH
TLLYQVLGIPHSPATLERLKSTRRAPNAGDHGPKPAVKASGRLLGASKVL
VPLLAMLAYQLQGKLAPRTTLPVGGRLHPGEYIAACGPLQSFTGHCKQHF
LTLDAEGRLSLYRGASPKDAGSHRLWQSKATRRSGKPTEAGLFAELNEGG
VLVLKHTAGGDATYWTSSSRKTEGEKKGQDAGRLHLRVLERGAFGIFEGS
TPLWTSDGILRKDTA
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mRNA from alignment at KK037256.1:137363..139347-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9797 ID=rna9797|Name=rna9797|organism=Nannochloropsis gaditana|type=mRNA|length=1985bp|location=Sequence derived from alignment at KK037256.1:137363..139347- (Nannochloropsis gaditana)
TTAGTTCTCTGTGTGGTCTTCACTGCGTTATTTCCTCCTCTTCCCTTCTA
CATAGGTGGCGCGCGCGCGGTTTTAGGGAGGGAGACAGGCACTCCCAGCG
TCTCGGCCTCACCAAGGTCATTGCCAGGGCCAGTATGGGCAAGATGATTC
CGGCGTCCGATCTTGTCACGACCCTCTTTGAGGTTGCCCGCAAGTTCTTG
CTGATGCAGTACCCGTACGAGTTCGAGGTGCGTGTGCTTGCAAAAAGACC
CATGATCTGTCTCCTCATGTCGCCAATGGAGTGCACGGTCTCTTACCTGT
GGGCAATCAATGCTGCCGGTGTGCGAAGGGCATGAAACTTTCTGCGAGAG
GAAGGAGGGATCGATTGTCCGTCGGCCTGTCGCCTCGGCTCAACCCCTCG
CTTTGCTCTTCTTGTCTTAGGACGGCAGTGATTTGAATATAAAGGACCAA
GACGTCAAAGTGTTGGGATATGTTGGCCGTGGGAGTCAATTTATTTTTCT
TACGCTTTTTGTCCTCCTCAACTCCTGCCTTCAGGTCTGTCTCTTTGCTT
TCTGTTTGGGTGCCTCCATGCGGGTGCGGCCTTCCGCGCAATATTCCTGG
CTCCACCATTTGGTCCTGGTCTTCCTGACGGGCTTTGCGGGAGGCACGAT
CATCCCCATGTTCTTCGGGCGCACCCCGGTTCTCTTCGTGAACGACCTCC
TCGTGCCCCTGGTCTGCCTCTCCTGGTACCTGGTGCACTACACGCGCGTC
GGCGGCCTCCTTCAGACCTCCCCCTGCAAGTTCCTCCTGGTGGCCCTCTT
CGAAATCTACCGGGCGGCCTCCATCCTCAAGACGGTGGGCCAGGCGACCA
CGGACATTGCGCCCGGGCCCTACTACCCCATCGCCGTGGTCGGTCCCGTT
CTCGTTGGGACCCTCTCTGGGAGCATGGGTGCCTTCATGCCCCCCGACCG
AGGCATTTCATTCCTGGCCACTGGCGTGCCCCTGAATTTGCAGACCACGC
TCCTCGCCTGCCTCTTCTACCACCTGGCCGCCCACGACCCGGCCCTCCCC
GGGGCCTACCTGCGCGGCCTCCCCGCCCTGCGCCTGAGCGACCCAGAGAA
CCTCAAGGCGCTCACCGTCTTCTTCTTCGTGGCCATGGCATTCCTCTCCC
TTGTCAAGGGCCCCGACTACAACCCCTTCACCCCGGTCCACACGCTCCTC
TACCAAGTGCTGGGCATCCCCCACTCCCCCGCCACCCTGGAACGCCTCAA
GTCCACGCGCCGCGCCCCCAACGCCGGCGACCACGGCCCCAAGCCCGCGG
TAAAGGCCTCGGGACGCCTACTGGGAGCGAGCAAGGTGCTCGTCCCCCTC
TTGGCCATGCTCGCCTACCAGCTCCAGGGCAAGCTCGCGCCTCGCACCAC
CCTCCCCGTCGGGGGGCGCCTACACCCGGGTGAGTACATCGCGGCGTGTG
GCCCCCTCCAGTCGTTCACTGGGCACTGCAAGCAGCACTTTTTGACTCTG
GATGCTGAAGGGCGGCTCAGCCTCTATCGTGGGGCCTCGCCCAAGGACGC
TGGCAGCCACCGCCTCTGGCAATCCAAAGCTACCCGGAGGAGTGGGAAAC
CCACGGAGGCCGGCCTCTTTGCGGAGCTGAATGAAGGGGGTGTGCTGGTC
CTAAAGCATACGGCGGGGGGCGACGCCACGTATTGGACGTCGTCCTCGCG
CAAGACTGAGGGGGAAAAGAAGGGACAGGACGCAGGGAGGCTGCATCTGC
GGGTCCTGGAGAGGGGCGCATTTGGCATCTTTGAGGGATCTACGCCTTTG
TGGACCTCAGACGGAATTCTGCGCAAGGACACGGCATAGATACGGGAGCC
GGTAACAAGTGTACAGGGGGCTGTGGGAGAAAAACGGTTTGGCGCGGGTG
CCTGCCACGGAGGGGGGGGAAGAGAGGCAAAGCGAAATCCGAGCGCCTAT
TGAATAAAAAAGTATCGACAAAGCTGGAGAAAATA
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Coding sequence (CDS) from alignment at KK037256.1:137363..139347-

>rna9797 ID=rna9797|Name=rna9797|organism=Nannochloropsis gaditana|type=CDS|length=2796bp|location=Sequence derived from alignment at KK037256.1:137363..139347- (Nannochloropsis gaditana)
GTCTGTCTCTTTGCTTTCTGTTTGGGTGCCTCCATGCGGGTGCGGCCTTC
CGCGCAATATTCCTGGCTCCACCATTTGGTCCTGGTCTTCCTGACGGGCT
TTGCGGGAGGCACGATCATCCCCATGTTCTTCGGGCGCACCCCGGTTCTC
TTCGTGAACGACCTCCTCGTGCCCCTGGTCTGCCTCTCCTGGTACCTGGT
GCACTACACGCGCGTCGGCGGCCTCCTTCAGACCTCCCCCTGCAAGTTCC
TCCTGGTGGCCCTCTTCGAAATCTACCGGGCGGCCTCCATCCTCAAGACG
GTGGGCCAGGCGACCACGGACATTGCGCCCGGGCCCTACTACCCCATCGC
CGTGGTCGGTCCCGTTCTCGTTGGGACCCTCTCTGGGAGCATGGGTGCCT
TCATGCCCCCCGACCGAGGCATTTCATTCCTGGCCACTGGCGTGCCCCTG
AATTTGCAGACCACGCTCCTCGCCTGCCTCTTCTACCACCTGGCCGCCCA
CGACCCGGCCCTCCCCGGGGCCTACCTGCGCGGCCTCCCCGCCCTGCGCC
TGAGCGACCCAGAGAACCTCAAGGCGCTCACCGTCTTCTTCTTCGTGGCC
ATGGCATTCCTCTCCCTTGTCAAGGGCCCCGACTACAACCCCTTCACCCC
GGTCCACACGCTCCTCTACCAAGTGCTGGGCATCCCCCACTCCCCCGCCA
CCCTGGAACGCCTCAAGTCCACGCGCCGCGCCCCCAACGCCGGCGACCAC
GGCCCCAAGCCCGCGGTAAAGGCCTCGGGACGCCTACTGGGAGCGAGCAA
GGTGCTCGTCCCCCTCTTGGCCATGCTCGCCTACCAGCTCCAGGGCAAGC
TCGCGCCTCGCACCACCCTCCCCGTCGGGGGGCGCCTACACCCGGGTGAG
TACATCGCGGCGTGTGGCCCCCTCCAGTCGTTCACTGGGCACTGCAAGCA
GCACTTTTTGACTCTGGATGCTGAAGGGCGGCTCAGCCTCTATCGTGGGG
CCTCGCCCAAGGACGCTGGCAGCCACCGCCTCTGGCAATCCAAAGCTACC
CGGAGGAGTGGGAAACCCACGGAGGCCGGCCTCTTTGCGGAGCTGAATGA
AGGGGGTGTGCTGGTCCTAAAGCATACGGCGGGGGGCGACGCCACGTATT
GGACGTCGTCCTCGCGCAAGACTGAGGGGGAAAAGAAGGGACAGGACGCA
GGGAGGCTGCATCTGCGGGTCCTGGAGAGGGGCGCATTTGGCATCTTTGA
GGGATCTACGCCTTTGTGGACCTCAGACGGAATTCTGCGCAAGGACACGG
CATAGATGGGCAAGATGATTCCGGCGTCCGATCTTGTCACGACCCTCTTT
GAGGTTGCCCGCAAGTTCTTGCTGATGCAGTACCCGTACGAGTTCGAGGT
CTGTCTCTTTGCTTTCTGTTTGGGTGCCTCCATGCGGGTGCGGCCTTCCG
CGCAATATTCCTGGCTCCACCATTTGGTCCTGGTCTTCCTGACGGGCTTT
GCGGGAGGCACGATCATCCCCATGTTCTTCGGGCGCACCCCGGTTCTCTT
CGTGAACGACCTCCTCGTGCCCCTGGTCTGCCTCTCCTGGTACCTGGTGC
ACTACACGCGCGTCGGCGGCCTCCTTCAGACCTCCCCCTGCAAGTTCCTC
CTGGTGGCCCTCTTCGAAATCTACCGGGCGGCCTCCATCCTCAAGACGGT
GGGCCAGGCGACCACGGACATTGCGCCCGGGCCCTACTACCCCATCGCCG
TGGTCGGTCCCGTTCTCGTTGGGACCCTCTCTGGGAGCATGGGTGCCTTC
ATGCCCCCCGACCGAGGCATTTCATTCCTGGCCACTGGCGTGCCCCTGAA
TTTGCAGACCACGCTCCTCGCCTGCCTCTTCTACCACCTGGCCGCCCACG
ACCCGGCCCTCCCCGGGGCCTACCTGCGCGGCCTCCCCGCCCTGCGCCTG
AGCGACCCAGAGAACCTCAAGGCGCTCACCGTCTTCTTCTTCGTGGCCAT
GGCATTCCTCTCCCTTGTCAAGGGCCCCGACTACAACCCCTTCACCCCGG
TCCACACGCTCCTCTACCAAGTGCTGGGCATCCCCCACTCCCCCGCCACC
CTGGAACGCCTCAAGTCCACGCGCCGCGCCCCCAACGCCGGCGACCACGG
CCCCAAGCCCGCGGTAAAGGCCTCGGGACGCCTACTGGGAGCGAGCAAGG
TGCTCGTCCCCCTCTTGGCCATGCTCGCCTACCAGCTCCAGGGCAAGCTC
GCGCCTCGCACCACCCTCCCCGTCGGGGGGCGCCTACACCCGGGTGAGTA
CATCGCGGCGTGTGGCCCCCTCCAGTCGTTCACTGGGCACTGCAAGCAGC
ACTTTTTGACTCTGGATGCTGAAGGGCGGCTCAGCCTCTATCGTGGGGCC
TCGCCCAAGGACGCTGGCAGCCACCGCCTCTGGCAATCCAAAGCTACCCG
GAGGAGTGGGAAACCCACGGAGGCCGGCCTCTTTGCGGAGCTGAATGAAG
GGGGTGTGCTGGTCCTAAAGCATACGGCGGGGGGCGACGCCACGTATTGG
ACGTCGTCCTCGCGCAAGACTGAGGGGGAAAAGAAGGGACAGGACGCAGG
GAGGCTGCATCTGCGGGTCCTGGAGAGGGGCGCATTTGGCATCTTTGAGG
GATCTACGCCTTTGTGGACCTCAGACGGAATTCTGCGCAAGGACACGGCA
TAGATGGGCAAGATGATTCCGGCGTCCGATCTTGTCACGACCCTCTTTGA
GGTTGCCCGCAAGTTCTTGCTGATGCAGTACCCGTACGAGTTCGAG
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Synonyms
Publications