EWM20901.1, cds9766 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20901.1 vs. NCBI_GenBank
Match: gi|585100856|gb|EWM20901.1| (Bulb-type lectin domain protein [Nannochloropsis gaditana]) HSP 1 Score: 940.258 bits (2429), Expect = 0.000e+0 Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 0 Query: 1 MGKMIPASDLVTTLFEVARKFLLMQYPYEFEVCLFAFCLGASMRVRPSAQYSWLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYTRVGGLLQTSPCKFLLVALFEIYRAASILKTVGQATTDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPENLKALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIPHSPATLERLKSTRRAPNAGDHGPKPAVKASGRLLGASKVLVPLLAMLAYQLQGKLAPRTTLPVGGRLHPGEYIAACGPLQSFTGHCKQHFLTLDAEGRLSLYRGASPKDAGSHRLWQSKATRRSGKPTEAGLFAELNEGGVLVLKHTAGGDATYWTSSSRKTEGEKKGQDAGRLHLRVLERGAFGIFEGSTPLWTSDGILRKDTA 465 MGKMIPASDLVTTLFEVARKFLLMQYPYEFEVCLFAFCLGASMRVRPSAQYSWLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYTRVGGLLQTSPCKFLLVALFEIYRAASILKTVGQATTDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPENLKALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIPHSPATLERLKSTRRAPNAGDHGPKPAVKASGRLLGASKVLVPLLAMLAYQLQGKLAPRTTLPVGGRLHPGEYIAACGPLQSFTGHCKQHFLTLDAEGRLSLYRGASPKDAGSHRLWQSKATRRSGKPTEAGLFAELNEGGVLVLKHTAGGDATYWTSSSRKTEGEKKGQDAGRLHLRVLERGAFGIFEGSTPLWTSDGILRKDTA Sbjct: 1 MGKMIPASDLVTTLFEVARKFLLMQYPYEFEVCLFAFCLGASMRVRPSAQYSWLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYTRVGGLLQTSPCKFLLVALFEIYRAASILKTVGQATTDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPENLKALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIPHSPATLERLKSTRRAPNAGDHGPKPAVKASGRLLGASKVLVPLLAMLAYQLQGKLAPRTTLPVGGRLHPGEYIAACGPLQSFTGHCKQHFLTLDAEGRLSLYRGASPKDAGSHRLWQSKATRRSGKPTEAGLFAELNEGGVLVLKHTAGGDATYWTSSSRKTEGEKKGQDAGRLHLRVLERGAFGIFEGSTPLWTSDGILRKDTA 465
BLAST of EWM20901.1 vs. NCBI_GenBank
Match: gi|298712888|emb|CBJ33404.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 152.14 bits (383), Expect = 7.090e-39 Identity = 94/287 (32.75%), Postives = 141/287 (49.13%), Query Frame = 0 Query: 16 EVARKFLLMQYPYEFEVCLFAFCLGASMRVRPSA---------------------------------QYSWLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYTR--VGGLLQTSPCKFLLVALFEIYRAASILKTVGQATTDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPENL--KALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIPHSPAT 265 E A FL + Y EVCL AF L S R A Q W LV+ ++ F GG + P G+ PV+FVNDL+VPLV + W++ + + L+ T K +++ L E++RA S+ V + + + PG +YPIA+ GP+L+GT+ G G F+P D+G+ L G P LQ+ +F++L +DP + G YLR AL L + +A+ F +A + P +NPFTPVH ++Y V G+P+ A Sbjct: 2 ENAVDFLTQNWEYGAEVCLAAFALFHSAREIKQACDALRLACAGSGALTFKQKAKILVRKIEKDSGKQMFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPLVAVCWFVSNRAEGPIFALINTPIMKQVILVLSEVFRANSMCGIVVLSNSILKPGKHYPIALWGPILLGTVGGCGGLFLPLDKGLKGLKNGAPWPLQSAFYGSMFFNLFVYDPNV-GPYLRDAAALFLDGDLVVQGRAIVAGFLCVVALAQTLISPAFNPFTPVHNVVYTVTGVPNPEAV 287
BLAST of EWM20901.1 vs. NCBI_GenBank
Match: gi|298707289|emb|CBJ25916.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 120.553 bits (301), Expect = 2.740e-26 Identity = 115/419 (27.45%), Postives = 182/419 (43.44%), Query Frame = 0 Query: 77 RTPVLFVN-DLLVP--LVCLSWYLVHYTRVGGLLQTSPCKFLLVALFEIYRAASILKTVGQATTDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPENLKALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIPHSPATLERLKST-----RRAPNAGDHGPKPA---------------VKASGRLLGASKVLVPLLAMLAYQLQ--GKLAPRTTLPVGGRLHPGEYIAACGPL-QSFTGHCKQHFLTLDAEGRLSLYRG-------ASPK----DAGSHRLWQSKATRRSGKPTEAGLFAELNEGGVLVLKHTAGGDATYWTSSSRKTEGEKKGQDAGRLHLRVLERGAFGIFEGSTPLWTSDG 458 R P LF+N DLLV +V + +V V ++T + L R I V A T P PYYPIA+ GP+++G G G+ +P D+G+S ++ +P +Q FYH+ A+D + G +RG L + E+++ + V F V + + P +NPFTP H LY V G+P + T+E +ST +A + G +G + A +K ++ + L P+ L + P T +P G +A+C L + + C + G L +YRG A+ K D G LW S A ++ E L +L+E G+L GD W SS+ T G++ L + +GA +++G W+S G Sbjct: 2 RDPPLFLNNDLLVTCIMVFFLFSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHVVANDTYILGGMVRGALGLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQALYTVTGMPKTAITIEVPRSTPSTDADKAKDNGGNGAEEAKDKEKKEGEGGGLYDLKTRKKIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLPKVLSNGCTPLRAAVTETGSLVVYRGKEVPVLPAAKKKVEGDDGPEVLWSSPAPKKLAAEDEVQL--DLSEDGIL---SVMAGDKKLW-SSTLTTLGKRLPNFRVEARLDAV-KGALEVYKGGQLQWSSAG 413
BLAST of EWM20901.1 vs. NCBI_GenBank
Match: gi|1210524244|dbj|GAX16973.1| (hypothetical protein FisN_5Hh352 [Fistulifera solaris]) HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-18 Identity = 81/286 (28.32%), Postives = 134/286 (46.85%), Query Frame = 0 Query: 20 KFLLMQYPY--EFEVCLFAFCLGASMRVRPSAQYS--WLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYT--RVGGLL-QTSPCKFLLVALFEIYRAASILKTVGQATTDIA--PGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGIS-FLATGVPLNLQTTLLACLFYHLAAHDPALP-GAYLR-GLPA--LRLSDPENLKALTVFFFVAMAFLSLVK--GPDYNPFTPVHTLLYQVLGIPHSPATLERLK-STRRAPNAGDHGPKPAVK 288 +F +PY EF+ AF ++R P+ + W H VL + F GG + ++ G+ + ND+ ++ +V+YT +G ++ +T P ++ + +++RA+ I+K V P PYYPI V GP+L GTL G+M F+ +G+ +++G+P +Q L FYH HD P G +LR +PA L D E + +F + L L + GP+++PF L + S ++ ER S + A D PA Sbjct: 6 QFATYSFPYAAEFQAIGMAFQGAMAVRSGPNKNGTLHWFHAFVLSVMAAFTGGWLGFIWMGKPSSMLSNDVNFASCIFAFVVVNYTPGDIGYMICRTLPVTLVITSSSQLFRASGIMKFVAACYDAFKDNPSPYYPIPVFGPILYGTLLGNMAGFL--MKGLEGHVSSGMPWPVQNGLFCATFYHFFVHDLNGPVGTFLRTSIPAGQFGLKDREFASCVVTYFMQIVGILQLPEFLGPNWSPFN---------LFLGRSSSSAERKSGSEHKKQTAPDEDEAPATN 280
BLAST of EWM20901.1 vs. NCBI_GenBank
Match: gi|1210515745|dbj|GAX25268.1| (hypothetical protein FisN_5Lh352 [Fistulifera solaris]) HSP 1 Score: 94.3597 bits (233), Expect = 5.808e-18 Identity = 73/247 (29.55%), Postives = 122/247 (49.39%), Query Frame = 0 Query: 20 KFLLMQYPY--EFEVCLFAFCLGASMRVRPSAQYS--WLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYT--RVGGLL-QTSPCKFLLVALFEIYRAASILKTVGQATTDIA--PGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGIS-FLATGVPLNLQTTLLACLFYHLAAHDPALP-GAYLR-GLPALR--LSDPENLKALTVFFFVAMAFLSLVK--GPDYNPFTPVH 250 +F +PY EF+ AF ++R P+ + W H VL + F GG + ++ G+ + ND+ ++ +V+YT +G ++ +T P ++ + +++RA+ I+K V P PYYPI V GP+L GTL G+M F+ +G+ ++ G+P +Q L FYH HD + P G +LR +PA + L D E + +F + L L + GP ++PF H Sbjct: 6 QFATYSFPYAAEFQAIGMAFQGAMAVRSGPNKNGTLHWFHAFVLSVMAAFTGGWLGFIWMGKPSSMLSNDVNFASCIFAFVVVNYTPGDIGYMICRTLPVTLVITSSAQLFRASGIMKFVAACYDAFKDNPSPYYPIPVFGPILYGTLLGNMAGFL--MKGLEGHVSKGMPWPVQNGLFCATFYHFFVHDSSGPVGTFLRTSIPARQFGLKDVEFASCVVTYFMQLVGILQLPEFLGPSWSPFNLFH 250
BLAST of EWM20901.1 vs. NCBI_GenBank
Match: gi|551566701|ref|XP_005769635.1| (hypothetical protein EMIHUDRAFT_470318 [Emiliania huxleyi CCMP1516] >gi|485620653|gb|EOD17206.1| hypothetical protein EMIHUDRAFT_470318 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 83.9593 bits (206), Expect = 1.348e-14 Identity = 63/231 (27.27%), Postives = 111/231 (48.05%), Query Frame = 0 Query: 13 TLFEVARKFLLMQ--YPYEFEVCLFAFCLGASMRVRPS-AQYSWLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYTR-VGGLLQTSPCKFLLVALFEIYRAASILKTVGQATTDIAPGPYYPI------AVVGPVLVGTLSGSMGAFMPPDRGISFL-ATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPENLKALTVFFFVAM 232 T EV R LL Q Y + + + L +C ++ + + +W + + L LT F GG ++P+ G +N+ L+P + ++W V Y V LLQ+ + + FE++R + A+ + P P+ A+VGP+L G + G GAFMP G+ L + +P +Q++ + ++HL HD A+ + +P L+DP +K + FF + Sbjct: 13 TPLEVLRDVLLFQGDYAFAYYIFLALYCAACCRNLKEALPRLTWFYAIPLAVLTSFGGGIMVPVLLGLPAAPLINEALIPTMIIAWACVQYLHPVLALLQSPFGRAASNSGFEVFRYHVLAICSDLASKTLPPVSTGPLAGTLSCALVGPLLCGMIGGCGGAFMPLSNGLKALEGSTIPWRVQSSAVMSAWHHLLTHDAAVRASAAEYVP--FLADPAMVKLCGILFFAGL 241
BLAST of EWM20901.1 vs. NCBI_GenBank
Match: gi|224011904|ref|XP_002294605.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969625|gb|EED87965.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 83.5741 bits (205), Expect = 2.814e-14 Identity = 75/272 (27.57%), Postives = 114/272 (41.91%), Query Frame = 0 Query: 20 KFLLMQYPYEFEVCLFAFCLGASMRVR--PSAQYS--WLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHY--TRVG-GLLQTSPCKFLLVALFEIYRAASI--LKTVGQATTDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHD-PALPGAYLRGL--------PALRLSDPENLKALTVFFFVAMAFLSLVK---------GPDYNPFTPVHTLLYQVLGIPHSPA 264 + + M +PY E + + SM VR P+ S W H LT +AG T +F GR +F ND+ L + V++ VG L T +FL +I+R + +P PYYP V GP+L ++ G+MG F + ++L G+P Q L +FYH AHD G LRG+ L +D + + +F VA+ L+ GP ++PF + ++ V G S A Sbjct: 7 RLITMDFPYATETVCYFMAVQGSMAVRNGPNKHKSMHWFHAFFKSTLTAYAGATFTNIFMGRPTAMFANDIFFGACILGFVTVNFLPMDVGYHLFNTFIGEFLATVFSQIFRVGGVTGFSDAAYGMFKDSPSPYYPTPVFGPILFPSVLGNMGGFF-FNGFDAYLEKGMPWLFQQGLSCSMFYHFYAHDSEGAIGQTLRGILKPVAVQVMTLLGADEKESEDDALFAKVAVGVFMLIMAIVRMPQFLGPRFSPFVTLRSMGANVFGKKKSNA 277
BLAST of EWM20901.1 vs. NCBI_GenBank
Match: gi|1072224862|gb|OEU09611.1| (hypothetical protein FRACYDRAFT_212285 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 70.8626 bits (172), Expect = 6.520e-10 Identity = 55/195 (28.21%), Postives = 93/195 (47.69%), Query Frame = 0 Query: 14 LFEVARKFLLMQYPYEFEVCLFAFCLGASMRVRP----SAQYSWLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVN-DLLVPLVCLSWYLVHYT--RVGGLLQTS-PCKFLLVALFEIYRAASILKTVGQATTDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGIS-FLATGVPLNLQTTLLACLFYHLAAHD 199 + E L PY E+ F +M VR + + +W H L + GF GG ++ G+ L N D+ + L +++ + YT +G L +S P K ++ +++RA ++ + ++ P YYP A++GPV+ GTL G+MG+F +G + L +P Q L+ FYH+ HD Sbjct: 1 MIESIVNILTGSSPYNVELRTFGQAFMGAMAVRSGKNKNKEMNWFHAFALSTIVGFGGGWFGFVWMGKPTSLITNGDITLTLTAIAFVISTYTPMDIGYKLGSSLPVKIVMNCWAQLFRALGMIGFINACAAEVGPSKYYPTAILGPVVYGTLLGNMGSFFL--KGFNQHLEKAIPWPFQNGLVMGFFYHVYTHD 193
BLAST of EWM20901.1 vs. NCBI_GenBank
Match: gi|219115944|ref|XP_002178767.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409534|gb|EEC49465.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 66.6254 bits (161), Expect = 1.691e-8 Identity = 71/250 (28.40%), Postives = 111/250 (44.40%), Query Frame = 0 Query: 16 EVARKFLLMQYPYEFEVCLFAFCLGASMRVR--PSAQYS--WLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYTRVG---GLLQTSPCKFLLVALFEIYRAASILK--TVGQATTDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALP-GAYLRGLPALRLS------DPENLKALTVFFFV-AMAFLSL--VKGPDYNPF 246 E+ +F + + E+ F + +M VR P+ S W H L + GF GG + ++ GR + NDL + +++ LV+YT + K V +++R+ + K V T +P YYPI V GP+L TL G+MG F+ F A G+P +Q L FYH +D P G +LR +LR++ D + + V F+ M L + GP + PF Sbjct: 7 ELLVQFSSGDFAFSGELQAFWMAVQGAMMVRLGPNKDRSLNWFHAFSLSVIGGFGGGWLGFIWMGRPSSMLSNDLNMASCIVAFILVNYTPMDIGFKCCNNIMGKIATVVFAQLFRSLGVAKFVMVCFETFKDSPSAYYPIPVFGPILYATLLGNMGGFVLKGFNGHF-ANGMPWPVQNGLFCATFYHFYVNDQTGPIGIFLR--KSLRMAHFLGFKDNQTFALVVVTMFMQVMGILQMPTFLGPSFTPF 253
BLAST of EWM20901.1 vs. NCBI_GenBank
Match: gi|223995365|ref|XP_002287366.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976482|gb|EED94809.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 61.6178 bits (148), Expect = 4.101e-7 Identity = 48/182 (26.37%), Postives = 87/182 (47.80%), Query Frame = 0 Query: 20 KFLLMQYPYEFEVCL--FAFCLGASMRVRPSAQYSWLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYT--RVGGLLQTSP-CKFLLVALFEIYRAASILKTVGQATTDIAPGPY-YPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHL 195 +FL + +C+ + F G+ + + S+ + LV + L GG ++P+F PV ND P+ L + +HY V +++ SP + ++E RA +L A+ IAP + +P+ GP++ GT++G GAF+P +G+S + G+ + T + HL Sbjct: 23 QFLTLHQKEVLYMCMLGYTFMHGSKVFAAAPKEASFSYKLVSMILACTGGGILVPIFLNGIPVPLANDAY-PIAILLSFAIHYYFPIVREVVKLSPIVNSCFIIMYEAVRAKVVLTFTVAASAAIAPSTFSFPL--FGPIMCGTIAGCGGAFLPMSKGLSPIENGMQYPMITAFIGATLAHL 201 The following BLAST results are available for this feature:
BLAST of EWM20901.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|