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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100156g11.1710.mrna |
| Orig protein id | gnl|cribi|Naga_100156g11.1710 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:136174..137367 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9796 ID=rna9796|Name=rna9796|organism=Nannochloropsis gaditana|type=mRNA|length=2427bp
ATGAGACTGGGCGTGGGGGATGACGAAGACGACGGGGGTAATGGCGGCGT
GGAGCTCGGCCTCGAAGTCCCCTTCGCGTTCTTTGCTATCCTCGTGCACA
TTGTAGCCGGGCATCTCTTGGAGCAGTGGGCGGAAAAAAGCAAGCACGTA
GTCCTGCTTAGCGAGGGCGTTATCGCCATCGGCATGGAGACCACGCCTTG
CGACCCGCGGGATGATGAGTGTGTTCCAACATCGTTGTACATTCTTCTAA
CGGACCTTTTCAAAGGGCTGAAGACCTTATACACTGCGTTCTTTCTGACA
CAAGCGGGGGACTGCCAGCGCGCACCCATTCGACCTCCCTTGTTTCCCCT
ACCCCCCCCAACTCAACCCTCGCTTCTCGGTCCCCGCGCCGAGGGTGCAT
CTGCAAGCTTGCGCCATGTATCTGACGCCTTCTCCCACGCCCTCTTTGCG
TCTCCCATACAGGTCTTCTGGTACGCTGTGCTGCCCCCAATCATCCTCCA
ACAGGCCTCCGGGCTCAAGAAGGCCGCTTTCTTCCAGAACCTCTTCCCCA
TCCTCGTCTACGGCGTCCTCGGGACCCTCCTGACCTTCGCCCTCCTGACT
GTGTCCGCCTTCTATCTGAGCAGGCTGCCCTGGGTGGTGACGGCCGGGTG
CTCCGAGGGCCTGCTCGACTTCCGGAAGGGCAAGGAGGGAGCGCGGAGGG
AGGAGGAGGAGGAGGGCACCGCTTGCTTCCAGGACTTCTCCCTGATCAAG
AGCCTCCTCTTGGCGGCGATCCTCTCCGCCTCAGACGGCGTGGCCGCCTT
GAAGCACATCCAACCCCATCACCCTCCACCCACCCTCCACCCTCATCAAC
CCGAGGCGGGTCAGACCTCGACGGCGGACCACCAGGACGAAGGACTCGCT
GCCGCCCCTTTTCCCCCGCACTCCTCCCCCTCTCCTGCTCCCTCTCCTCC
AAGCTCTTCCTCCTCCCGGCTTGGTGCTCTCATTCTGGGGGAGAACGTGC
TCAACGAGGCCCTGAGCATCCTGCTCTTCAAGACCGCCTTGGACGACTAC
CGGCAGCCTGACAAAGGGGCCGTGGACCGGCTCACGGGCCTGCGCGCCCT
CGTTCTCCTCGCCACCGCCGTCCTCATCGGCCTCCTCGTGGGCCTGGCCT
GCTCCCGCCTCCTCTACCGCCAGCCCTCCTTCCGCCACGACCCCCTCCGC
CAGGTCGCCCTCCTCCTCATGTGCAACTACCTGGCCTACGGCATCGCCGA
GTCCCTGGGGCTCTCCGGCACCCTCACCCTCCTCTTCTGCTCCCTCACCC
TCTCCCATTACGCCCCCCGCAACCTGGCGCCCGCTGCCCAGGCGGGCGCG
GCCGTCACCTTCGAGCTCATGTCCATGGTCGCGGAAGCCTTCTCCTTCGT
CTACATCGGCCTGACCCTGGCTGGCCTCCGCGGGCGCTACTCCCTCCGTT
TCTCCTTCCTCCTCTTCCTCGCCCTCGCCGGGATCCGCCTCCTCGGCGTC
TTCCTCCTCACCCCCCTCCTCCGGCTCTGGGACCCCCGCCTCGTCCTCCC
TTTCCGGGAACAGCTCGCCTTCGCGGTGGCGGGGATGGTACGGGGGAACG
TGTGCTGGGCCCAGGCCCTGCAGGTGGGCAGCACGGATCAGGAGATCGCC
TCTACGGTCTTGGTGGTGGTGTTGTTGGGCTTGGCAGTCTTCGAGGTCCT
CCTGCCCCTCCTGGTTCGCTTGCTCGGGCTGCGGGGGGGGGGCGGGGGTA
GTAGGGAGGGGAAGGCGGGGGCCCGGGGAGGGCAGAAGGGGCCGCGGGGA
CGGTGCAAGGAAGTGTACAAGGGCGTGCTCCAGGTCCGGGGGGAGGAAGG
GGCGGAGGAAGTGCTGTTGGTCGAGGACTGGGCCGAGGAGGAGGGAGGGG
AAAGGCCCGGGGCCAGGGTACAGAGCCAGCCTCCGGCCCGAGCTCCACCT
GCGGCGTCGGTGGCAGAGCGATGGAACGCCTGGGTGGGTGCGGCCTTTGC
GCGCCTGGATGAGGGCTACCTGCAGCCTTTCTTCTCGGGCCCGCCGGCGG
GGGCGGGGACGGCGGGGGCGGGGGAGACGGGAGGGGAGGAGAGAGAGGAA
AGGGGCCCGTGCGAGCCGCGGGAGAAGGGCCGGTGCAGGCCTTCAGGTGG
CATGGGTGCGTCGAGTCTGGAGGAGGAGGGCCCATGCTACCCGGAGGTTG
GGAATCGGCCGAGGCACCTGTCACGAAAGGGAGAGCAGGAGCGGGCGCGG
CTCGTGTATGGTAACTACGAAGCTATCCCGGGGGAAGACCCCGTGGGGTG
CCCGGCGGCGGAAGCGGACGGTGCCTCTCACGATGGGGACATAGAGGGGG
AAGGGGAAGTGCGCTTGAGGAGGGCGCGGGGCCCCGGGGGCCAGGTCGGG
GGTTCAGGCAGTGACGACTCCGCCTAG back to topprotein sequence of rna9796 >rna9796-protein ID=rna9796-protein|Name=rna9796|organism=Nannochloropsis gaditana|type=polypeptide|length=257bp
MAEDVGVSSSISAESNGRQPSQVLLSFSGGKDSSMALHVLRNDPNFHVVG
IMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYE
GAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLL
PLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDD
LPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV
PRARVKA back to topmRNA from alignment at KK037256.1:136174..137367+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9796 ID=rna9796|Name=rna9796|organism=Nannochloropsis gaditana|type=mRNA|length=1194bp|location=Sequence derived from alignment at KK037256.1:136174..137367+ (Nannochloropsis gaditana)
TAAAACCGCGCAATCCATGGACACGCCAGTGGTGCAAGACGTGCGCGCGT
ACTGCCCATGTTTGTCAACATCTCGTCTTCTGATTTCATTGGGTCGAAAG
AGCATCAAGGGAACACGAGAACATAAAACTGGCTTCGGACAGGTAGATGC
AAGATGGAGCGGGGATAGCGGAGCCTTCCGAGCCCGCTCTGACATGGTTC
GCGGAACCTGGGAGGGCGctcgacaggaggaggagagtggttGACCAACG
CATTGAAATCGCTTCACTTTTTCCGGTGCAGTAGGACACATCTTCGGAAA
TGGCAGAGGATGTCGGAGTCTCGAGTAGTATCTCAGCAGAGTCCAATGGT
CGACAACCATCGCAAGTACTACTTTCCTTctcaggagggaaggattcaTC
CATGGCACTGCATGTGCTACGCAATGATCCCAACTTCCATGTAGTGGGTA
TCATGGTTCAAGTAGAGAAAGATAATGACCGCGTGAGCGTGCATGAGGTT
CGAAGGGAATTATTGGATGCTCAAGttgccgcccttccctccgacTTGAC
CGTTTTCCATGTGTGCCTCCCCGTCATGAGCACCAATTGTCAATATGAAG
GAGCAATTTTTGACTGCTTTGCTGAGGCCCGACAATGTTTTCCTCTTCTG
AAATATGTGGCATTTGGTGACATCTTTTTGGCGGACGTGCGCGACTATCG
CATGGGTGTGCTAGCACGGTGGTCTGGCCATGGTGGttgtcctctccttc
ctctcttccctctctggGGTCGCGACACGACCAGATTGGCGCGTGACTTC
CTTGCGCTGGGATTTCGTGCCCATTTGGTGTGCGTGGATACGACTCAACT
GGACGCTACGTACGTAGGCCGGCAGTATGATGCTGCCTTGCTGGATGACT
TGCCAGCTCACGTGGACCTAtgcggggaaaagggagagttCCACACTTTT
GTCAGCGCCGGACCTGTCTTCTCGTCGACTGTCCCCGTGCAGGTGGGGCA
TGTCGAAAGCAGGGGAACAGCTGGGCGGTTTGCCTATTGCGACTTGGTAC
CGAGGGCAAGGGTGAAGGCGTGAGCGGATGCTTCGGACCCTTGGGAAGCC
CCGTCTTGTGTGGCGAAAGAAGGCAACAATCGTCACAATTCCATGATGTG
AAAAATAAATAGATGAATCATCTGTAGCTTGCAAACCTCTATTT back to topCoding sequence (CDS) from alignment at KK037256.1:136174..137367+ >rna9796 ID=rna9796|Name=rna9796|organism=Nannochloropsis gaditana|type=CDS|length=774bp|location=Sequence derived from alignment at KK037256.1:136174..137367+ (Nannochloropsis gaditana)
ATGGCAGAGGATGTCGGAGTCTCGAGTAGTATCTCAGCAGAGTCCAATGG
TCGACAACCATCGCAAGTACTACTTTCCTTctcaggagggaaggattcaT
CCATGGCACTGCATGTGCTACGCAATGATCCCAACTTCCATGTAGTGGGT
ATCATGGTTCAAGTAGAGAAAGATAATGACCGCGTGAGCGTGCATGAGGT
TCGAAGGGAATTATTGGATGCTCAAGttgccgcccttccctccgacTTGA
CCGTTTTCCATGTGTGCCTCCCCGTCATGAGCACCAATTGTCAATATGAA
GGAGCAATTTTTGACTGCTTTGCTGAGGCCCGACAATGTTTTCCTCTTCT
GAAATATGTGGCATTTGGTGACATCTTTTTGGCGGACGTGCGCGACTATC
GCATGGGTGTGCTAGCACGGTGGTCTGGCCATGGTGGttgtcctctcctt
cctctcttccctctctggGGTCGCGACACGACCAGATTGGCGCGTGACTT
CCTTGCGCTGGGATTTCGTGCCCATTTGGTGTGCGTGGATACGACTCAAC
TGGACGCTACGTACGTAGGCCGGCAGTATGATGCTGCCTTGCTGGATGAC
TTGCCAGCTCACGTGGACCTAtgcggggaaaagggagagttCCACACTTT
TGTCAGCGCCGGACCTGTCTTCTCGTCGACTGTCCCCGTGCAGGTGGGGC
ATGTCGAAAGCAGGGGAACAGCTGGGCGGTTTGCCTATTGCGACTTGGTA
CCGAGGGCAAGGGTGAAGGCGTGA back to top
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