EWM20903.1, cds9765 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|553187721|ref|XP_005854666.1| (atp binding protein [Nannochloropsis gaditana CCMP526] >gi|422294393|gb|EKU21693.1| atp binding protein [Nannochloropsis gaditana CCMP526] >gi|585100858|gb|EWM20903.1| hypothetical protein Naga_100156g11 [Nannochloropsis gaditana]) HSP 1 Score: 526.939 bits (1356), Expect = 0.000e+0 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0 Query: 1 MAEDVGVSSSISAESNGRQPSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLVPRARVKA 257 MAEDVGVSSSISAESNGRQPSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLVPRARVKA Sbjct: 1 MAEDVGVSSSISAESNGRQPSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLVPRARVKA 257
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|1016916661|gb|AMY09093.1| (hypothetical protein LuPra_02304 [Luteitalea pratensis]) HSP 1 Score: 223.402 bits (568), Expect = 9.546e-70 Identity = 123/234 (52.56%), Postives = 155/234 (66.24%), Query Frame = 0 Query: 18 RQPSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLVP 251 R+P V LS+SGGKDS++AL LR DP VV +M V ++ DR+S+H VRR LL+AQVA+ + L + V L +N YE A FD A P ++ +AFGD+FL DVR YR +L R +G GC FPLWGR+T +LA DF+A GF AHL CVDTTQL A + GR +D L+ +LPA VD CGE+GEFHTFVSAGP+FS + V G V R GRFAYCD++P Sbjct: 5 REP--VALSWSGGKDSALALAALREDPRLEVVALMTSVTREYDRISIHGVRRVLLEAQVAS--AGLPLIEVTLEPQCSNEAYEAAFFDAVARMGVGHPGVETLAFGDLFLEDVRAYREALLRR-AGLTGC-----FPLWGRETRQLAHDFVARGFVAHLACVDTTQLAARFAGRVFDDGLIAELPAGVDPCGERGEFHTFVSAGPIFSQPIAVSCGDVVLRD--GRFAYCDILP 226
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|258593254|emb|CBE69593.1| (conserved protein of unknown function [Candidatus Methylomirabilis oxyfera]) HSP 1 Score: 200.675 bits (509), Expect = 8.567e-61 Identity = 110/235 (46.81%), Postives = 146/235 (62.13%), Query Frame = 0 Query: 17 GRQPSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLVP 251 G PS+VL+++S GKDS+ AL VLR VVG++ + DRV++H VRR L++AQ A +DL + V LP +N YE A+ A+AR + +VAFGD+FL DVR YR +R G G L PLFPLWGR T LAR+ ++ G A + CVD +L +Y GR +D ALLD+LP VD CGE+GEFHTF AGP+F+ +PV +G V +R F + DLVP Sbjct: 2 GNNPSRVLIAWSSGKDSAWALQVLREAGEVEVVGLLTTFNEAFDRVAMHAVRRGLVEAQARA--ADLPLVDVPLPWPCSNAAYEEAMGRALADARTQLKI-THVAFGDLFLEDVRQYRE---SRMRGTG---LAPLFPLWGRPTRTLAREMVSAGLGARITCVDLKRLSPSYAGRSFDGALLDELPGEVDPCGERGEFHTFACAGPMFARPIPVSLGEVVTRDG---FVFADLVP 224
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|494142457|ref|WP_007082205.1| (ATP-binding protein [Rhodanobacter fulvus] >gi|388431259|gb|EIL88343.1| hypothetical protein UU9_12882 [Rhodanobacter fulvus Jip2]) HSP 1 Score: 196.052 bits (497), Expect = 4.350e-59 Identity = 108/228 (47.37%), Postives = 145/228 (63.60%), Query Frame = 0 Query: 23 VLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250 +LL++SGGKD +AL L DP +HVVG++ + + RV++H VR+E+L AQ AAL L + V L +N YE A D A+A++ +P L++ AFGD+FL DVRDYR+ L R + +FPLWG DTT L+R F++ G RA L CVDT QLDA++ GR YDA+LLD LPA VD CGE+GEFHT AGP+F P+ + ES RF + D + Sbjct: 6 ILLAWSGGKDCLLALQRLLADPRWHVVGLLTTINRSYQRVAMHGVRQEVLAAQTAAL--GLPLVEVALDWPGSNEAYEQAHADALAQAQRRWPGLRHCAFGDLFLQDVRDYRVRQLGRENWRA------VFPLWGEDTTLLSRRFISEGHRARLCCVDTQQLDASFCGRDYDASLLDSLPAGVDPCGERGEFHTLSYAGPLFRQ--PLTLNRGESVLRDDRFQFTDFL 223
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|947414744|ref|WP_056080620.1| (MULTISPECIES: ATP-binding protein [Rhodanobacter] >gi|945745739|gb|KQX99929.1| ATP-binding protein [Rhodanobacter sp. Root480] >gi|945983111|gb|KRA36132.1| ATP-binding protein [Rhodanobacter sp. Root627]) HSP 1 Score: 195.282 bits (495), Expect = 1.026e-58 Identity = 108/228 (47.37%), Postives = 144/228 (63.16%), Query Frame = 0 Query: 23 VLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250 +LL++SGGKD +AL L DP +HVVG++ + + RV++H VR+E+L AQ AAL L + V L +N YE A + A+A++ +P L++ AFGD+FL DVRDYR+ L R + +FPLWG DTT L+R F++ G RA L CVDT QLDA + GR YDAALLD LPA VD CGE+GEFHT AGP+F P+ + ES RF + D + Sbjct: 6 ILLAWSGGKDCLLALQRLLADPRWHVVGLLTTINRSYQRVAMHGVRQEVLAAQTAAL--GLPLVEVALDWPGSNEAYEKAHAEALAQAQRRWPGLRHCAFGDLFLQDVRDYRVRQLGRENWRA------VFPLWGEDTTLLSRRFISEGHRARLCCVDTQQLDAGFCGRDYDAALLDSLPAGVDPCGERGEFHTLSYAGPLFRQ--PLTLNRGESVLRDDRFQFTDFL 223
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|1119871158|ref|WP_072759972.1| (ATP-binding protein [Rhodanobacter sp. OK091] >gi|1110149683|emb|SHL66397.1| MJ0570-related uncharacterized domain-containing protein [Rhodanobacter sp. OK091]) HSP 1 Score: 194.512 bits (493), Expect = 1.683e-58 Identity = 110/228 (48.25%), Postives = 143/228 (62.72%), Query Frame = 0 Query: 23 VLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250 +LL++SGGKD +AL L DP + VVG++ V ++ RV++H V+ E+L AQ +AL L + V L +N YE A EAR +P +++ AFGD+FL DVRDYR+ L R + +FPLWG DTT L+R F+A G RA L CVDT QLDA Y GR YDAALLD LPA VD CGE+GEFHT AGP+FS P+++ ES GRF + D + Sbjct: 5 ILLAWSGGKDCLLALQRLLADPQWQVVGLLTTVNRNYQRVAMHGVQHEVLRAQTSAL--GLPLVEVMLDWPGSNEAYEQAHAQGLVEARMRWPGIRHCAFGDLFLEDVRDYRVRQLGRENWRA------VFPLWGEDTTTLSRRFVAEGHRAMLCCVDTQQLDAEYCGRAYDAALLDALPAGVDPCGERGEFHTLSYAGPLFSQ--PLKLRRGESVLRDGRFQFTDFL 222
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|822537323|ref|WP_046966719.1| (ATP-binding protein [Luteibacter rhizovicinus] >gi|822110974|gb|KLD67820.1| ATP-binding protein [Luteibacter rhizovicinus DSM 16549] >gi|1109362539|gb|APG05197.1| ATP-binding protein [Luteibacter rhizovicinus DSM 16549]) HSP 1 Score: 193.741 bits (491), Expect = 4.171e-58 Identity = 110/230 (47.83%), Postives = 141/230 (61.30%), Query Frame = 0 Query: 21 SQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250 + +++S+SGGKD M L LR DP++ VVG++ V ++DR+++H VRR +L AQ A+L L V L S N YE A ARQ +P L ++AFGD+FLADVR YR LAR G G ++PLWG DT L R F+A G RA L CVDTTQLDA++ GR YD ALLD LP+ VD CGE GEFHT GP+F+ + + G ES RF Y D + Sbjct: 3 TPIIVSWSGGKDCLMTLGRLRADPSWRVVGLLTTVTANHDRIAMHGVRRTVLAAQAASL--GLPVVEAVLTWPSHNDAYEEAFARALDTARQRWPTLAHIAFGDLFLADVRAYREAQLARIGGWTG-----VYPLWGEDTATLGRRFVADGHRAALCCVDTTQLDASFCGRDYDQALLDALPSSVDPCGENGEFHTLSYGGPLFAHDMRIVRG--ESVLRDERFQYTDFL 223
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|1148785466|ref|WP_077515243.1| (ATP-binding protein [Rhodanobacter sp. B05] >gi|1147848666|gb|OOG52778.1| ATP-binding protein [Rhodanobacter sp. B05]) HSP 1 Score: 193.741 bits (491), Expect = 4.431e-58 Identity = 108/228 (47.37%), Postives = 143/228 (62.72%), Query Frame = 0 Query: 23 VLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250 +LL++SGGKD +AL L DP + VVG++ V ++ RV++H V+RE+L AQ AAL L + V L +N YE A EAR +P +++ AFGD+FL DVRDYR+ L R + +FPLWG DT L+R F++ G RA L CVDT QLDA+Y GR YDAALLD LPA +D CGE+GEFHT AGP+F P+++ ES GRF + D + Sbjct: 5 ILLAWSGGKDCLLALQRLLADPQWQVVGLLTTVNRNYQRVAMHGVQREVLLAQTAAL--GLPLVEVTLDWPGSNEAYEQAHAQGLVEARMRWPGIRHCAFGDLFLEDVRDYRVRQLGRENWRA------VFPLWGEDTAALSRRFVSEGHRAMLCCVDTQQLDASYCGRAYDAALLDTLPAGIDPCGERGEFHTLSYAGPLFRQ--PLKLRRGESVLRDGRFQFTDFL 222
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|1148748678|ref|WP_077481356.1| (ATP-binding protein [Rhodanobacter sp. C06] >gi|1147844691|gb|OOG48863.1| ATP-binding protein [Rhodanobacter sp. C06]) HSP 1 Score: 193.741 bits (491), Expect = 4.912e-58 Identity = 108/233 (46.35%), Postives = 145/233 (62.23%), Query Frame = 0 Query: 20 PSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLAR--WSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250 P+ +LL++SGGKD MAL LR DP++ VVG++ + ++ R+++H VR+++L AQVAAL L + V L +N YE A AEA + +P +++ AFGD+FL DVRDYR+ L R W +FPLWG DT L+R F+A G A L CVDT QL A + GR YDAALLD LPA VD CGE+GEFHT GP+F T+ ++ G ES RF + D + Sbjct: 5 PTPILLAWSGGKDCLMALQRLRADPHWQVVGLLTTINRNYQRIAMHGVRQDVLKAQVAAL--GLPLVEVLLDWPGSNEAYEAAHVQALAEAHRRWPGIRHCAFGDLFLEDVRDYRVRQLGRDNWRA--------VFPLWGEDTATLSRRFVAEGHHAMLCCVDTQQLAADFCGRAYDAALLDALPAGVDPCGERGEFHTLSFGGPLFKQTLKLRRG--ESVLRDNRFQFTDFL 225
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|648415530|ref|WP_026107281.1| (ATP-binding protein [Dyella ginsengisoli]) HSP 1 Score: 191.815 bits (486), Expect = 1.918e-57 Identity = 106/231 (45.89%), Postives = 142/231 (61.47%), Query Frame = 0 Query: 20 PSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250 P+ +LL++SGGKD MAL LR DP++ VV ++ V + DR+++H VRR +L+AQ A+L L V + P +N YE A AEAR +P +++ AFGD+FL DVRDYR+ L G +FP+WG DT L+R F+A G RA L CVDT QLDA + GR YD ALLD LP VD CGE+GEFHT GP+F + P+++ ES RF + D + Sbjct: 3 PTPILLAWSGGKDCLMALQRLRADPHWQVVALLTTVNRTYDRIAMHGVRRTILEAQAASLGLPLVVAEMDWP--GSNEAYEEAHARALAEARMRWPGVRHCAFGDLFLQDVRDYRVRQL------GQAEWRAVFPIWGEDTAALSRRFVAEGHRAMLCCVDTQQLDAAFCGRAYDGALLDALPVGVDPCGERGEFHTLSCGGPLFRT--PLRLRRGESVLRDERFQFTDFL 223 The following BLAST results are available for this feature:
BLAST of EWM20903.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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