EWM20903.1, cds9765 (CDS) Nannochloropsis gaditana

Overview
NameEWM20903.1
Unique Namecds9765
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:136473..137246 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20903.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100156g11.1710.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:136473..137246 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR002761DUF71_dom
IPR014729Rossmann-like_a/b/a_fold
Homology
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|553187721|ref|XP_005854666.1| (atp binding protein [Nannochloropsis gaditana CCMP526] >gi|422294393|gb|EKU21693.1| atp binding protein [Nannochloropsis gaditana CCMP526] >gi|585100858|gb|EWM20903.1| hypothetical protein Naga_100156g11 [Nannochloropsis gaditana])

HSP 1 Score: 526.939 bits (1356), Expect = 0.000e+0
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
Query:    1 MAEDVGVSSSISAESNGRQPSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLVPRARVKA 257
            MAEDVGVSSSISAESNGRQPSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLVPRARVKA
Sbjct:    1 MAEDVGVSSSISAESNGRQPSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLVPRARVKA 257          
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|1016916661|gb|AMY09093.1| (hypothetical protein LuPra_02304 [Luteitalea pratensis])

HSP 1 Score: 223.402 bits (568), Expect = 9.546e-70
Identity = 123/234 (52.56%), Postives = 155/234 (66.24%), Query Frame = 0
Query:   18 RQPSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLVP 251
            R+P  V LS+SGGKDS++AL  LR DP   VV +M  V ++ DR+S+H VRR LL+AQVA+  + L +  V L    +N  YE A FD  A      P ++ +AFGD+FL DVR YR  +L R +G  GC     FPLWGR+T +LA DF+A GF AHL CVDTTQL A + GR +D  L+ +LPA VD CGE+GEFHTFVSAGP+FS  + V  G V  R   GRFAYCD++P
Sbjct:    5 REP--VALSWSGGKDSALALAALREDPRLEVVALMTSVTREYDRISIHGVRRVLLEAQVAS--AGLPLIEVTLEPQCSNEAYEAAFFDAVARMGVGHPGVETLAFGDLFLEDVRAYREALLRR-AGLTGC-----FPLWGRETRQLAHDFVARGFVAHLACVDTTQLAARFAGRVFDDGLIAELPAGVDPCGERGEFHTFVSAGPIFSQPIAVSCGDVVLRD--GRFAYCDILP 226          
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|258593254|emb|CBE69593.1| (conserved protein of unknown function [Candidatus Methylomirabilis oxyfera])

HSP 1 Score: 200.675 bits (509), Expect = 8.567e-61
Identity = 110/235 (46.81%), Postives = 146/235 (62.13%), Query Frame = 0
Query:   17 GRQPSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLVP 251
            G  PS+VL+++S GKDS+ AL VLR      VVG++    +  DRV++H VRR L++AQ  A  +DL +  V LP   +N  YE A+    A+AR    +  +VAFGD+FL DVR YR    +R  G G   L PLFPLWGR T  LAR+ ++ G  A + CVD  +L  +Y GR +D ALLD+LP  VD CGE+GEFHTF  AGP+F+  +PV +G V +R     F + DLVP
Sbjct:    2 GNNPSRVLIAWSSGKDSAWALQVLREAGEVEVVGLLTTFNEAFDRVAMHAVRRGLVEAQARA--ADLPLVDVPLPWPCSNAAYEEAMGRALADARTQLKI-THVAFGDLFLEDVRQYRE---SRMRGTG---LAPLFPLWGRPTRTLAREMVSAGLGARITCVDLKRLSPSYAGRSFDGALLDELPGEVDPCGERGEFHTFACAGPMFARPIPVSLGEVVTRDG---FVFADLVP 224          
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|494142457|ref|WP_007082205.1| (ATP-binding protein [Rhodanobacter fulvus] >gi|388431259|gb|EIL88343.1| hypothetical protein UU9_12882 [Rhodanobacter fulvus Jip2])

HSP 1 Score: 196.052 bits (497), Expect = 4.350e-59
Identity = 108/228 (47.37%), Postives = 145/228 (63.60%), Query Frame = 0
Query:   23 VLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250
            +LL++SGGKD  +AL  L  DP +HVVG++  + +   RV++H VR+E+L AQ AAL   L +  V L    +N  YE A  D  A+A++ +P L++ AFGD+FL DVRDYR+  L R +         +FPLWG DTT L+R F++ G RA L CVDT QLDA++ GR YDA+LLD LPA VD CGE+GEFHT   AGP+F    P+ +   ES     RF + D +
Sbjct:    6 ILLAWSGGKDCLLALQRLLADPRWHVVGLLTTINRSYQRVAMHGVRQEVLAAQTAAL--GLPLVEVALDWPGSNEAYEQAHADALAQAQRRWPGLRHCAFGDLFLQDVRDYRVRQLGRENWRA------VFPLWGEDTTLLSRRFISEGHRARLCCVDTQQLDASFCGRDYDASLLDSLPAGVDPCGERGEFHTLSYAGPLFRQ--PLTLNRGESVLRDDRFQFTDFL 223          
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|947414744|ref|WP_056080620.1| (MULTISPECIES: ATP-binding protein [Rhodanobacter] >gi|945745739|gb|KQX99929.1| ATP-binding protein [Rhodanobacter sp. Root480] >gi|945983111|gb|KRA36132.1| ATP-binding protein [Rhodanobacter sp. Root627])

HSP 1 Score: 195.282 bits (495), Expect = 1.026e-58
Identity = 108/228 (47.37%), Postives = 144/228 (63.16%), Query Frame = 0
Query:   23 VLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250
            +LL++SGGKD  +AL  L  DP +HVVG++  + +   RV++H VR+E+L AQ AAL   L +  V L    +N  YE A  +  A+A++ +P L++ AFGD+FL DVRDYR+  L R +         +FPLWG DTT L+R F++ G RA L CVDT QLDA + GR YDAALLD LPA VD CGE+GEFHT   AGP+F    P+ +   ES     RF + D +
Sbjct:    6 ILLAWSGGKDCLLALQRLLADPRWHVVGLLTTINRSYQRVAMHGVRQEVLAAQTAAL--GLPLVEVALDWPGSNEAYEKAHAEALAQAQRRWPGLRHCAFGDLFLQDVRDYRVRQLGRENWRA------VFPLWGEDTTLLSRRFISEGHRARLCCVDTQQLDAGFCGRDYDAALLDSLPAGVDPCGERGEFHTLSYAGPLFRQ--PLTLNRGESVLRDDRFQFTDFL 223          
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|1119871158|ref|WP_072759972.1| (ATP-binding protein [Rhodanobacter sp. OK091] >gi|1110149683|emb|SHL66397.1| MJ0570-related uncharacterized domain-containing protein [Rhodanobacter sp. OK091])

HSP 1 Score: 194.512 bits (493), Expect = 1.683e-58
Identity = 110/228 (48.25%), Postives = 143/228 (62.72%), Query Frame = 0
Query:   23 VLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250
            +LL++SGGKD  +AL  L  DP + VVG++  V ++  RV++H V+ E+L AQ +AL   L +  V L    +N  YE A      EAR  +P +++ AFGD+FL DVRDYR+  L R +         +FPLWG DTT L+R F+A G RA L CVDT QLDA Y GR YDAALLD LPA VD CGE+GEFHT   AGP+FS   P+++   ES    GRF + D +
Sbjct:    5 ILLAWSGGKDCLLALQRLLADPQWQVVGLLTTVNRNYQRVAMHGVQHEVLRAQTSAL--GLPLVEVMLDWPGSNEAYEQAHAQGLVEARMRWPGIRHCAFGDLFLEDVRDYRVRQLGRENWRA------VFPLWGEDTTTLSRRFVAEGHRAMLCCVDTQQLDAEYCGRAYDAALLDALPAGVDPCGERGEFHTLSYAGPLFSQ--PLKLRRGESVLRDGRFQFTDFL 222          
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|822537323|ref|WP_046966719.1| (ATP-binding protein [Luteibacter rhizovicinus] >gi|822110974|gb|KLD67820.1| ATP-binding protein [Luteibacter rhizovicinus DSM 16549] >gi|1109362539|gb|APG05197.1| ATP-binding protein [Luteibacter rhizovicinus DSM 16549])

HSP 1 Score: 193.741 bits (491), Expect = 4.171e-58
Identity = 110/230 (47.83%), Postives = 141/230 (61.30%), Query Frame = 0
Query:   21 SQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250
            + +++S+SGGKD  M L  LR DP++ VVG++  V  ++DR+++H VRR +L AQ A+L   L V    L   S N  YE A       ARQ +P L ++AFGD+FLADVR YR   LAR  G  G     ++PLWG DT  L R F+A G RA L CVDTTQLDA++ GR YD ALLD LP+ VD CGE GEFHT    GP+F+  + +  G  ES     RF Y D +
Sbjct:    3 TPIIVSWSGGKDCLMTLGRLRADPSWRVVGLLTTVTANHDRIAMHGVRRTVLAAQAASL--GLPVVEAVLTWPSHNDAYEEAFARALDTARQRWPTLAHIAFGDLFLADVRAYREAQLARIGGWTG-----VYPLWGEDTATLGRRFVADGHRAALCCVDTTQLDASFCGRDYDQALLDALPSSVDPCGENGEFHTLSYGGPLFAHDMRIVRG--ESVLRDERFQYTDFL 223          
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|1148785466|ref|WP_077515243.1| (ATP-binding protein [Rhodanobacter sp. B05] >gi|1147848666|gb|OOG52778.1| ATP-binding protein [Rhodanobacter sp. B05])

HSP 1 Score: 193.741 bits (491), Expect = 4.431e-58
Identity = 108/228 (47.37%), Postives = 143/228 (62.72%), Query Frame = 0
Query:   23 VLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250
            +LL++SGGKD  +AL  L  DP + VVG++  V ++  RV++H V+RE+L AQ AAL   L +  V L    +N  YE A      EAR  +P +++ AFGD+FL DVRDYR+  L R +         +FPLWG DT  L+R F++ G RA L CVDT QLDA+Y GR YDAALLD LPA +D CGE+GEFHT   AGP+F    P+++   ES    GRF + D +
Sbjct:    5 ILLAWSGGKDCLLALQRLLADPQWQVVGLLTTVNRNYQRVAMHGVQREVLLAQTAAL--GLPLVEVTLDWPGSNEAYEQAHAQGLVEARMRWPGIRHCAFGDLFLEDVRDYRVRQLGRENWRA------VFPLWGEDTAALSRRFVSEGHRAMLCCVDTQQLDASYCGRAYDAALLDTLPAGIDPCGERGEFHTLSYAGPLFRQ--PLKLRRGESVLRDGRFQFTDFL 222          
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|1148748678|ref|WP_077481356.1| (ATP-binding protein [Rhodanobacter sp. C06] >gi|1147844691|gb|OOG48863.1| ATP-binding protein [Rhodanobacter sp. C06])

HSP 1 Score: 193.741 bits (491), Expect = 4.912e-58
Identity = 108/233 (46.35%), Postives = 145/233 (62.23%), Query Frame = 0
Query:   20 PSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLAR--WSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250
            P+ +LL++SGGKD  MAL  LR DP++ VVG++  + ++  R+++H VR+++L AQVAAL   L +  V L    +N  YE A     AEA + +P +++ AFGD+FL DVRDYR+  L R  W          +FPLWG DT  L+R F+A G  A L CVDT QL A + GR YDAALLD LPA VD CGE+GEFHT    GP+F  T+ ++ G  ES     RF + D +
Sbjct:    5 PTPILLAWSGGKDCLMALQRLRADPHWQVVGLLTTINRNYQRIAMHGVRQDVLKAQVAAL--GLPLVEVLLDWPGSNEAYEAAHVQALAEAHRRWPGIRHCAFGDLFLEDVRDYRVRQLGRDNWRA--------VFPLWGEDTATLSRRFVAEGHHAMLCCVDTQQLAADFCGRAYDAALLDALPAGVDPCGERGEFHTLSFGGPLFKQTLKLRRG--ESVLRDNRFQFTDFL 225          
BLAST of EWM20903.1 vs. NCBI_GenBank
Match: gi|648415530|ref|WP_026107281.1| (ATP-binding protein [Dyella ginsengisoli])

HSP 1 Score: 191.815 bits (486), Expect = 1.918e-57
Identity = 106/231 (45.89%), Postives = 142/231 (61.47%), Query Frame = 0
Query:   20 PSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDLV 250
            P+ +LL++SGGKD  MAL  LR DP++ VV ++  V +  DR+++H VRR +L+AQ A+L   L V  +  P   +N  YE A     AEAR  +P +++ AFGD+FL DVRDYR+  L      G      +FP+WG DT  L+R F+A G RA L CVDT QLDA + GR YD ALLD LP  VD CGE+GEFHT    GP+F +  P+++   ES     RF + D +
Sbjct:    3 PTPILLAWSGGKDCLMALQRLRADPHWQVVALLTTVNRTYDRIAMHGVRRTILEAQAASLGLPLVVAEMDWP--GSNEAYEEAHARALAEARMRWPGVRHCAFGDLFLQDVRDYRVRQL------GQAEWRAVFPIWGEDTAALSRRFVAEGHRAMLCCVDTQQLDAAFCGRAYDGALLDALPVGVDPCGERGEFHTLSCGGPLFRT--PLRLRRGESVLRDERFQFTDFL 223          
The following BLAST results are available for this feature:
BLAST of EWM20903.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553187721|ref|XP_005854666.1|0.000e+0100.00atp binding protein [Nannochloropsis gaditana CCMP... [more]
gi|1016916661|gb|AMY09093.1|9.546e-7052.56hypothetical protein LuPra_02304 [Luteitalea prate... [more]
gi|258593254|emb|CBE69593.1|8.567e-6146.81conserved protein of unknown function [Candidatus ... [more]
gi|494142457|ref|WP_007082205.1|4.350e-5947.37ATP-binding protein [Rhodanobacter fulvus] >gi|388... [more]
gi|947414744|ref|WP_056080620.1|1.026e-5847.37MULTISPECIES: ATP-binding protein [Rhodanobacter] ... [more]
gi|1119871158|ref|WP_072759972.1|1.683e-5848.25ATP-binding protein [Rhodanobacter sp. OK091] >gi|... [more]
gi|822537323|ref|WP_046966719.1|4.171e-5847.83ATP-binding protein [Luteibacter rhizovicinus] >gi... [more]
gi|1148785466|ref|WP_077515243.1|4.431e-5847.37ATP-binding protein [Rhodanobacter sp. B05] >gi|11... [more]
gi|1148748678|ref|WP_077481356.1|4.912e-5846.35ATP-binding protein [Rhodanobacter sp. C06] >gi|11... [more]
gi|648415530|ref|WP_026107281.1|1.918e-5745.89ATP-binding protein [Dyella ginsengisoli][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9796rna9796Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications