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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100156g14.1714.mrna |
| Orig protein id | gnl|cribi|Naga_100156g14.1714 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:129173..130950 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9794 ID=rna9794|Name=rna9794|organism=Nannochloropsis gaditana|type=mRNA|length=2319bp
ATGTGGGGGGGGCAGGGCGGGGGCAGCAGCCAGGCAGGACACGATGGGAC
CGGCCAGGAGTTACCAGGGCGCCGGACGGGGAAAAGCGACCCGGATTTTG
GGGACACGGACCTTTCTTTCCAGCGCAGGGACCGACGGCCCGAGCCTTCC
GCACGCGCCATCCTGCTGGCGGGGCCGCCGGGAATCGGAAAGACCACACT
TGCCCACGTGATAGCCGAGCACTGCGGGTACAGGCCCTTGGAGATCAACG
CCTCGGACGACAGGTCAGCAGGCGCCCTCCGGGAGAAGATGACGCGTGCC
ATGCAGAACCAGGCGGTGCTGGGTGATAAGCGGCCCAATTGCATCATCCT
GGACGAGGCGGATGGGATCGAGGGGAAAGCTGCCATGAAAATGATCGTGA
ACATCATCAAAGCCCCTTTGAAGAGCAAGCAGAAAGGCAGCGCCGGCAGC
AAGGACGAGGCTGGGGGCCATTCCGGGGCCGACGGGAGCGTTTCGTGCCC
CCCCTTGACGCGGCCACTGATTTGCATCTGCAACGACCTGTACGTTCCCG
CCCTCCGGGCCCTTCGCGAGGTGGCTACCGTCTTTCGGTTCCGGCGGCGC
ACCAATCCCCGCCTCTTGCAGCGCCTGAAAACCATCTGCCAAGCCGAGAA
CCTGCCCGTAGAGGGCGTGGCTTTGAGCGTCCTGTGCGAAGCCTCCGGCC
ACGACGTGCGCTCCTGCCTGAACACGCTCCAATTCTTCCAGGCCCGTCTA
CCCGCCGCGGTCCTGTCCCAGGGCCAAGGGCAGGAAGAACAGGATAAGCC
ACCGGCCGCCTTCGCCTCCCATCTCTCGCGCCAGCTCCTGGAGTACGTGG
GAGAGGGCCTCAAGGACCAAGAGAAGGACATGCTTCAAGTCTGCCAGTCC
CTCTTCCGCAAGCCGGCCTCCAAGGCGACGGCCACGCCCGCCCTCTTGCC
CGGGGAGGAGGGAGCAGGGACGGAGGAGCGGGCACAGAGCCGGGTCCGCG
ACACCGACCGGGTCATGACCAGCGTCGCTTCCTACAGCGACCACGCCCAC
GTCCTCCTGGCCGCCCAGGAGAACTACTGCCAGCTCCGCTTCACGGACCC
GAGCCTGACGAAAGTTCTGCATGCGGCGGAATGGCTGGCTTTCTCCGACC
TGGTGCACGGGCGGCAGATGGAGGGGCTCCACGTGATGGAGGACCTGCAC
CTGGCCACCGCCGCCGCCCTCCACCTGCTTTGCCGCGTGGAGACTCGTCC
GCGCCTGGCCCTGCCCCGCAAAGACCACGAATACCGGAGCGCCCGCCTGA
GCCGACAGCACATTCTCCAGTCTTTCGGCGAGGGCTGCTCCCTCCAAGCG
CTGTGGGCACGGCGTCCCACCCCCGTCGTCCTGGATGTGGTGTCGCCGCT
CATGCACATCTTGAACCCGAGCCTGCGGCCCGTGAATCCCGACCTGTATT
CTTTCGCAGAAAAGGCGGGTCTTCGGCACCTGGTGGACGTGTTGCTGGCC
TGTGGGATCTCCTACGTCCAGAGCCCTGGCAGTGGCCTCTCCCATCCGCA
CCAGCATTCAGGGGCGCCTGAGCGTTTGGAAATGCTCCCGGCACTGGTCC
ACCTGGCCGAATTCGGTCTGGCGAACGACGGAACGGGCGCGCCAAAATCC
GAGACCTTGCCAGTGCAACGCCCGCGTCCGCCGCGCCTCCTGCCCGCCTT
TGTCAAGCTCCTGGCCACGCAGGAGGCGAAGCTTGAGGCCTTGCGAAGGA
CAGAGCTCCGCAAGACCGATGCGTTGAAAGCTAAAAAGGGCATGTCTTCG
TCGACAGGGCAAGGACCTCGCTCGAACGGTCTGCCCTCCAAGGCGGCTGC
GTCTTGCGAGGCCACCCCCGGCCCGAATATTGCGCCCCTGGTGGCGAAAG
AGGAGGAGGAGCCTGGGCCAAAAGCATGGTACGTGAAGCTTGGAACCAAG
CGCAGCACGACCAAGACAAAATCTAGGACGCAAACCGACGGGAGCCCTGT
AGGGGATACGGGCACCCGGGGGCTTGACCTCGGGGAGGGCCTTTTTCCTC
CCGAGCACAAACAGTCCGCAGCGAAGAAGTCCACTGTACGCTTCAAGTAT
GTCGCAGGATACACGAACGCGGTGCGCCGCCCTGTCTATATGAAAGACAT
GATCTAGGTGAAGGGCGGGCATAAGCTTGAAACGTGAGGAGCTAGTAGTG
GGAAGGAAGAAGTTCAGGGCAAGAGAGACGTGGGAACGTAAAGTAGGATA
ATCGAGGACCACCCGAGTCATCAAAAGCACTAACTGGAGACGCAGTCAAC
ATCGCATTTTCATGCTTTA back to topprotein sequence of rna9794 >rna9794-protein ID=rna9794-protein|Name=rna9794|organism=Nannochloropsis gaditana|type=polypeptide|length=400bp
MDVGLLYRPRDTVFGIWGTRPDSFIFQSILRSIEGGWLVTRVLSLRIQAK
TTTQDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGAR
REVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPL
LGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTE
VSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAAL
MLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTP
QVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRN
QFSSMATEDESLQQYLDRLTPAAVKMQAHYTAAGSASATQYAHHHAGSKS back to topmRNA from alignment at KK037256.1:129173..130950+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9794 ID=rna9794|Name=rna9794|organism=Nannochloropsis gaditana|type=mRNA|length=1778bp|location=Sequence derived from alignment at KK037256.1:129173..130950+ (Nannochloropsis gaditana)
CGCCCCCTCGTCTGCCCTACTGCCAGACGCTTCGGAAAATCACTTGGCCG
CGGTGGCCGGCgacgccggggggggggacaaaaGCCGGTATGGACGTGGG
CCTGCTCTACCGACCGCGGGACACGGTCTTCGGGATCTGGGGCACCCGCC
CCGACTCTTTCATTTTTCAGAGCATCCTCCGGTCCATCGAGGGTGGCTGG
CTGGTCACTCGGGTCCTCAGCCTGCGCATTCAGGCCAAGACAACCACGCA
GGACCAcagcgccctccccgtcctggcGCTCAAACGCGCCGTCCTCCGAC
TTTCCCAGCAGCTCGCTCCAGGTATCCTTGCTTCCCCGGGGAGTGGCACG
GCGCCGGCGGCGGCAACCACGGCGGCCGCGGGCGCGCGCCGGGAGGTGGA
cagcgtggtggaggagattcgcacccttttccctcgccTCCACGCCTACG
TCAGGAAGCGTGGAGGATTCGGACGTCCCTGCGGCTCGGAACTGgagggg
gccgtggaggtgATCTACCAGGGGCATCGCGggcccctccttggccggcA
TCAgcagggcgaggacgtggcctGCGCCCTTCGTTATCGGTTCCTGACCC
TGGGTCTGGAGgaagcgacccggatgttgTCGCCTGTCTTGCTTTCCACG
GGCCCCTTGATCGTGGCGACCTCGGACGCGACCACCGAGGTCTCCGGCAA
TCAGGGCGAGGCAGTGCCGGGAGGGGACAGAAAGCTGCAGCCTTGGCCGT
GTCAGACCATGGCGCTGTGGCCCCACCTGGTCTTGCTGCTCGACACCCAG
GACCGTCTGGTCATATGGATAGGACGCGAGGCGGCCCTGATGCTCGCTGC
GGGTATGGATGAAAGGGACGGGCCCTTGAGCGACCCCAAGTACGGCGAGT
GGCTCCCGGGCTCGGAGGCGGCGCAACAGTCATTGCAAGCGTGCCGGGCG
TACGCGGAGCAGGCGCGACAGGACCGCTTTCCCACGCctcaggtggtgga
ggttgTGGAAGGGGACCCGATGGAGCGCTTCTTATGGGCCAGCCTCATTC
CCACCCACAAAGATCCGCCCGACGTACTGTTCTCGCGCTTCCCCGCTCTC
CGTTCAATGCAGCCGGAACGCGTGGAGGCTCTGCGGAACCAATTTAGCAG
CATGGCAACAGAGGACGAGTCCTTGCAACAATATTTGGATCGGCTGACGC
CCGCGGCAGTCAAGATGCAGGCCCATTACACGGCCGCGGGTTCGGCATCG
GCGACTCAGTATGCCCACCACCATGCCGGGAGCAAAAGCTAGTTTGAAGT
AGTTTGTTCACGAGACGAGACCCAGCAAAGTATTGAAAATAATGCGACTC
AGAACCACGGATACCTCTTTCCCAAATTTCAATTTCAATAACTTGATATA
TTTATTCGTAAATTCATGGAATATCCAGGGCAATCCAAAAGGGGGTCCCA
CCCTAACCCTTCGAATAATACCGGGATTTACTTGCAAATAATCGGGTCCC
CTCAGTGTTGCCCATGGTCTTTTCAAAAAGAAAGACACGTATTAAGAAAG
ATGAAGCATAAGGACACGGATGTCGGGTAGGAAAGGCGTTGTCGGGATCC
TCCATTATGTTGTCcgcggagaaagaaatggGCCATACTTCCCGAGACTG
CCCGGCCCCAGGCAATCCGCCAGATACCGAGGGCAGACGAAAAATAAGTG
TGTACGCGATGAGCTCTGGTAGATGGTGAATCAGGTTTGATTTCTGCCGG
GTGGCGGAGATGTGCActcggggaaaaa back to topCoding sequence (CDS) from alignment at KK037256.1:129173..130950+ >rna9794 ID=rna9794|Name=rna9794|organism=Nannochloropsis gaditana|type=CDS|length=1203bp|location=Sequence derived from alignment at KK037256.1:129173..130950+ (Nannochloropsis gaditana)
ATGGACGTGGGCCTGCTCTACCGACCGCGGGACACGGTCTTCGGGATCTG
GGGCACCCGCCCCGACTCTTTCATTTTTCAGAGCATCCTCCGGTCCATCG
AGGGTGGCTGGCTGGTCACTCGGGTCCTCAGCCTGCGCATTCAGGCCAAG
ACAACCACGCAGGACCAcagcgccctccccgtcctggcGCTCAAACGCGC
CGTCCTCCGACTTTCCCAGCAGCTCGCTCCAGGTATCCTTGCTTCCCCGG
GGAGTGGCACGGCGCCGGCGGCGGCAACCACGGCGGCCGCGGGCGCGCGC
CGGGAGGTGGAcagcgtggtggaggagattcgcacccttttccctcgccT
CCACGCCTACGTCAGGAAGCGTGGAGGATTCGGACGTCCCTGCGGCTCGG
AACTGgagggggccgtggaggtgATCTACCAGGGGCATCGCGggcccctc
cttggccggcATCAgcagggcgaggacgtggcctGCGCCCTTCGTTATCG
GTTCCTGACCCTGGGTCTGGAGgaagcgacccggatgttgTCGCCTGTCT
TGCTTTCCACGGGCCCCTTGATCGTGGCGACCTCGGACGCGACCACCGAG
GTCTCCGGCAATCAGGGCGAGGCAGTGCCGGGAGGGGACAGAAAGCTGCA
GCCTTGGCCGTGTCAGACCATGGCGCTGTGGCCCCACCTGGTCTTGCTGC
TCGACACCCAGGACCGTCTGGTCATATGGATAGGACGCGAGGCGGCCCTG
ATGCTCGCTGCGGGTATGGATGAAAGGGACGGGCCCTTGAGCGACCCCAA
GTACGGCGAGTGGCTCCCGGGCTCGGAGGCGGCGCAACAGTCATTGCAAG
CGTGCCGGGCGTACGCGGAGCAGGCGCGACAGGACCGCTTTCCCACGCct
caggtggtggaggttgTGGAAGGGGACCCGATGGAGCGCTTCTTATGGGC
CAGCCTCATTCCCACCCACAAAGATCCGCCCGACGTACTGTTCTCGCGCT
TCCCCGCTCTCCGTTCAATGCAGCCGGAACGCGTGGAGGCTCTGCGGAAC
CAATTTAGCAGCATGGCAACAGAGGACGAGTCCTTGCAACAATATTTGGA
TCGGCTGACGCCCGCGGCAGTCAAGATGCAGGCCCATTACACGGCCGCGG
GTTCGGCATCGGCGACTCAGTATGCCCACCACCATGCCGGGAGCAAAAGC
TAG back to top
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