EWM20907.1, cds9763 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|585100862|gb|EWM20907.1| (hypothetical protein Naga_100156g14 [Nannochloropsis gaditana]) HSP 1 Score: 812.372 bits (2097), Expect = 0.000e+0 Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0 Query: 1 MDVGLLYRPRDTVFGIWGTRPDSFIFQSILRSIEGGWLVTRVLSLRIQAKTTTQDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRLTPAAVKMQAHYTAAGSASATQYAHHHAGSKS 400 MDVGLLYRPRDTVFGIWGTRPDSFIFQSILRSIEGGWLVTRVLSLRIQAKTTTQDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRLTPAAVKMQAHYTAAGSASATQYAHHHAGSKS Sbjct: 1 MDVGLLYRPRDTVFGIWGTRPDSFIFQSILRSIEGGWLVTRVLSLRIQAKTTTQDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRLTPAAVKMQAHYTAAGSASATQYAHHHAGSKS 400
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|695036023|ref|XP_009405449.1| (PREDICTED: protein transport protein SEC23 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 88.1965 bits (217), Expect = 3.522e-15 Identity = 68/236 (28.81%), Postives = 101/236 (42.80%), Query Frame = 0 Query: 134 ELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369 EL E ++ RGPLLG ED LR FL + + RML+P L G E +P D +A+ ++ ++LD + IW+G E A G AA +L ACR AE+ + RFP P+++ EG R+ + LIP HKDPP +RFP LR++ PE+ L++ F + +D S +++ L Sbjct: 677 ELSTLPESLFHLRRGPLLGNIVGHEDERSVLRNLFLNASFDLSLRMLAPRCL-------------MHRDGGTFEELPAYD----------LAMQSNVAVVLDHGTEIFIWLGAELAAQ---------------------EGKSAA--ALAACRTLAEELTEHRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRTLTPEQRTRLKSSF--LHFDDYSFCEWMRSL 864
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|218188098|gb|EEC70525.1| (hypothetical protein OsI_01634 [Oryza sativa Indica Group]) HSP 1 Score: 87.4261 bits (215), Expect = 6.429e-15 Identity = 90/338 (26.63%), Postives = 135/338 (39.94%), Query Frame = 0 Query: 39 VTRVLSLRIQAK-------TTTQDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369 +TRV+++R+Q + QD A V+ KR VLR A + A R +D E ++ L + V K + P EL E ++ RGPLLG ED LR FL + + RML+P + G E +P D +A+ + ++LD + IW+G E A G AA +L ACR AE+ + RFP P+++ EG R+ + LIP HKDP SRFP LR++ PE+ L++ F + +D S +++ L Sbjct: 590 ITRVITIRLQTVDGLSAYLASVQDDVA-SVIIGKRTVLR-------------------ARTASDAIDMRLTID---ERVKDLALKFGTQVPKSKLYRFP--KELASLPECLFHLRRGPLLGSIVGHEDERSVLRNLFLNASFDLSFRMLAPRCI-------------MHREGGTFEELPAYD----------LAMQSNAAVVLDHGTDIFIWLGAELAAQ---------------------EGQSAA--ALAACRTLAEELSELRFPAPRILSFKEGSSQARYFVSRLIPAHKDPTYEQESRFPQLRTLTPEQRSRLKSSF--IHFDDHSFCEWMRSL 854
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|1026018164|ref|XP_016540047.1| (PREDICTED: protein transport protein SEC23 [Capsicum annuum]) HSP 1 Score: 87.0409 bits (214), Expect = 9.731e-15 Identity = 88/342 (25.73%), Postives = 136/342 (39.77%), Query Frame = 0 Query: 39 VTRVLSLRIQAKTTT-------QDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLF----PRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369 +TRV+S+R+ + QD A VL KR +LR A A R +D +++I + F P+ Y + EL EV++ RGPLLG ED LR FL + + RM++P L G E +P D +A+ ++LD + IW+G E +D ++G +L ACR AE+ + RFP P+++ EG R+ + LIP HKDPP +RFP LR++ PE+ L++ F + +D S +++ L Sbjct: 603 ITRVISVRLPTVDSVSSYLQSVQDEVAA-VLIAKRTLLR-------------------AKNANDALDMRATIDERIKDITSKFGSQMPKSKLYQFPK---------ELSLLPEVLFHLRRGPLLGSILGHEDERSVLRNLFLNAAFDLSLRMVAPRCL-------------MHRQGGTFEELPAYD----------LAMQSDAAVVLDHGTDVFIWLGAE--------LDAQEG---------------KGAAALAACRTLAEELTEMRFPAPRILAFKEGSSQARYFVSRLIPGHKDPPYEQEARFPQLRTLTPEQRTKLKSSF--LYFDDPSFCEWMRSL 867
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|743769009|ref|XP_010914784.1| (PREDICTED: protein transport protein SEC23 [Elaeis guineensis]) HSP 1 Score: 87.0409 bits (214), Expect = 1.007e-14 Identity = 68/236 (28.81%), Postives = 101/236 (42.80%), Query Frame = 0 Query: 134 ELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369 EL E ++ RGPLLG ED LR FL + + RML+P L G E +P D +A+ + ++LD + IW+G E A G AA +L ACR AE+ ++RFP P+++ EG R+ + LIP HKDPP +RFP LR++ PE+ L++ F + +D S +++ L Sbjct: 677 ELSSLPENLFHLRRGPLLGNIVGHEDERSVLRNLFLHASFDLSLRMLAPRCL-------------MHREGGTFEELPAYD----------LAMQSNAAVVLDHGTDVFIWLGAELAAQ---------------------EGKSAA--ALAACRTLAEELTENRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRTLTPEQRTKLKSSF--LHFDDYSFCEWMRSL 864
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|702489356|ref|XP_010035379.1| (PREDICTED: protein transport protein SEC23 [Eucalyptus grandis] >gi|629080306|gb|KCW46751.1| hypothetical protein EUGRSUZ_K00564 [Eucalyptus grandis]) HSP 1 Score: 86.6557 bits (213), Expect = 1.220e-14 Identity = 70/236 (29.66%), Postives = 101/236 (42.80%), Query Frame = 0 Query: 134 ELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369 EL E+++ RGPLLG ED LR FL + + RM++P L G E +P D +A+ ++LD + IW+G E A DE G AA +L ACR AE+ + RFP P+++ EG R+ + LIP HKDPP +RFP LRS+ E+ L+N F + +D S +++ L Sbjct: 679 ELSLLPELLFHLKRGPLLGSIVGHEDERSVLRNLFLNASFDLSLRMVAPRCL-------------MHREGGTFEELPAYD----------LAMQSDTAVVLDHGTDIFIWMGAELA------ADE---------------GKNAA--TLAACRTLAEELTESRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYDQEARFPQLRSLTAEQRTKLKNSF--LHFDDPSFCEWMRSL 866
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|1175847188|ref|XP_020577189.1| (protein transport protein SEC23 [Phalaenopsis equestris]) HSP 1 Score: 86.6557 bits (213), Expect = 1.400e-14 Identity = 77/269 (28.62%), Postives = 110/269 (40.89%), Query Frame = 0 Query: 105 SVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRLTPAA 373 ++ E ++ + R + K F P EL E+++ RGPLLG ED LR FL E + RMLSP L G E VP D +Q + ++LD + IW+G E + DE G AA +L ACR AE+ + RFP P+++ EG R+ + LIP HKDPP +RF LRS+ + L+ F T+D S +++ AA Sbjct: 656 TIDERVKDIASRFGLMLPKSKLFRFP--KELSSLPEILFHLRRGPLLGSIVGHEDERSVLRNLFLNSSYELSLRMLSPRCL-------------MHREGGTFEEVPSYDLSMQS----------NAAVVLDHGTDIFIWLGNELS------ADE---------------GKSAA--ALAACRTLAEELSEQRFPAPRILSFKEGSSQARYFVSRLIPAHKDPPYEQEARFAQLRSLSTAQRARLKASF--FHTDDPSFCEWMRSFKLAA 874
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|1150733024|ref|XP_020277253.1| (protein transport protein SEC23 [Asparagus officinalis] >gi|1150733026|ref|XP_020277254.1| protein transport protein SEC23 [Asparagus officinalis]) HSP 1 Score: 86.2705 bits (212), Expect = 1.608e-14 Identity = 79/280 (28.21%), Postives = 117/280 (41.79%), Query Frame = 0 Query: 90 AAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369 A T A R VD V++I + F + + K F P EL E ++ RGPLLG ED LR FL + + RML+P L G E +P D +A+ + ++LD + IW+G E A G AA +L ACR AE+ ++RFP P+++ EG R+ + LIP HKDPP +RFP LR++ P++ L+ F + +D S +++ L Sbjct: 632 AQNPTDAIDMRLTVDERVKDIASKF---GSQMPKSKLFRFP--KELSLLPENLFHLRRGPLLGNIVGHEDERSVLRNLFLNASFDLSLRMLAPRCL-------------MHREGGTFEELPAYD----------LAMQSNTAVVLDHGTDVFIWLGAELASQ---------------------EGKSAA--ALAACRTLAEELTENRFPAPRILSFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRTLTPDQRARLKASF--LHFDDYSFCEWMRSL 858
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|1035919245|gb|OAY48835.1| (hypothetical protein MANES_05G009100 [Manihot esculenta]) HSP 1 Score: 86.2705 bits (212), Expect = 1.752e-14 Identity = 92/338 (27.22%), Postives = 137/338 (40.53%), Query Frame = 0 Query: 39 VTRVLSLRIQAKTTT-------QDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369 ++RV+++R+ + QD A VL KR +LR A +AA R +D E I+ + + + ++K + P EL E ++ RGPLLG ED LR FL E + RM++P L G E +P D +A+ ++LD + IW+G E A DE G AA +L ACR AE+ + RFP P+++ EG R+ + LIP HKDPP +RFP LRS+ ER L+ F + +D S +++ L Sbjct: 603 ISRVITVRLPTVDSVSSYLGSVQDEVAA-VLIAKRTLLR-------------------AKNYSAAIDMRATID---ERIKDIALKYGSQLQKSKLYRFP--KELSLLPEFLFHLRRGPLLGNIVGHEDERSVLRNLFLNASFELSLRMVAPRCL-------------MHREGGTFEELPAYD----------LAMQSDTAVVLDQGTDVFIWLGAELA------ADE---------------GRSAA--ALAACRTLAEELTEVRFPAPRILAFKEGSSQSRYFVSRLIPAHKDPPYEQEARFPQLRSLTTERRTKLKCSF--IHFDDPSFCEWMRSL 867
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|695073915|ref|XP_009384140.1| (PREDICTED: protein transport protein SEC23 [Musa acuminata subsp. malaccensis] >gi|695073917|ref|XP_009384141.1| PREDICTED: protein transport protein SEC23 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 86.2705 bits (212), Expect = 1.887e-14 Identity = 74/266 (27.82%), Postives = 113/266 (42.48%), Query Frame = 0 Query: 105 SVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRLT 370 +V E ++ + + + + K F P +EL E ++ RGPLLG ED LR FL + + RML+P L G E +P D +A+ + ++LD L IW+G E A G AA +L ACR AE+ ++RFP P+++ EG R+ + LIP HKDPP +RF LRS+ PE+ L++ F + +D S +++ L Sbjct: 639 TVDERVKDIALKFGSQLPKSKLFRFP--NELSTLPESLFHLRRGPLLGNIIGHEDERSVLRNLFLNASFDLSLRMLAPRCL-------------MHREGGTFEELPAYD----------LAMQSNAAVVLDHGTDLFIWLGAELAAQ---------------------EGKSAA--ALAACRTLAEELTENRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFLQLRSLTPEQRARLKSSF--LHFDDYSFCEWMRSLN 854 The following BLAST results are available for this feature:
BLAST of EWM20907.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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