EWM20907.1, cds9763 (CDS) Nannochloropsis gaditana

Overview
NameEWM20907.1
Unique Namecds9763
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:129262..130464 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20907.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100156g14.1714.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:129262..130464 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR029006ADF-H/Gelsolin-like_dom
Homology
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|585100862|gb|EWM20907.1| (hypothetical protein Naga_100156g14 [Nannochloropsis gaditana])

HSP 1 Score: 812.372 bits (2097), Expect = 0.000e+0
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0
Query:    1 MDVGLLYRPRDTVFGIWGTRPDSFIFQSILRSIEGGWLVTRVLSLRIQAKTTTQDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRLTPAAVKMQAHYTAAGSASATQYAHHHAGSKS 400
            MDVGLLYRPRDTVFGIWGTRPDSFIFQSILRSIEGGWLVTRVLSLRIQAKTTTQDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRLTPAAVKMQAHYTAAGSASATQYAHHHAGSKS
Sbjct:    1 MDVGLLYRPRDTVFGIWGTRPDSFIFQSILRSIEGGWLVTRVLSLRIQAKTTTQDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRLTPAAVKMQAHYTAAGSASATQYAHHHAGSKS 400          
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|695036023|ref|XP_009405449.1| (PREDICTED: protein transport protein SEC23 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 88.1965 bits (217), Expect = 3.522e-15
Identity = 68/236 (28.81%), Postives = 101/236 (42.80%), Query Frame = 0
Query:  134 ELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369
            EL    E ++   RGPLLG     ED    LR  FL    + + RML+P  L                 G   E +P  D          +A+  ++ ++LD    + IW+G E A                        G  AA  +L ACR  AE+  + RFP P+++   EG    R+  + LIP HKDPP    +RFP LR++ PE+   L++ F  +  +D S  +++  L
Sbjct:  677 ELSTLPESLFHLRRGPLLGNIVGHEDERSVLRNLFLNASFDLSLRMLAPRCL-------------MHRDGGTFEELPAYD----------LAMQSNVAVVLDHGTEIFIWLGAELAAQ---------------------EGKSAA--ALAACRTLAEELTEHRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRTLTPEQRTRLKSSF--LHFDDYSFCEWMRSL 864          
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|218188098|gb|EEC70525.1| (hypothetical protein OsI_01634 [Oryza sativa Indica Group])

HSP 1 Score: 87.4261 bits (215), Expect = 6.429e-15
Identity = 90/338 (26.63%), Postives = 135/338 (39.94%), Query Frame = 0
Query:   39 VTRVLSLRIQAK-------TTTQDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369
            +TRV+++R+Q          + QD  A  V+  KR VLR                   A   + A   R  +D   E ++ L  +    V K   +  P   EL    E ++   RGPLLG     ED    LR  FL    + + RML+P  +                 G   E +P  D          +A+  +  ++LD    + IW+G E A                        G  AA  +L ACR  AE+  + RFP P+++   EG    R+  + LIP HKDP     SRFP LR++ PE+   L++ F  +  +D S  +++  L
Sbjct:  590 ITRVITIRLQTVDGLSAYLASVQDDVA-SVIIGKRTVLR-------------------ARTASDAIDMRLTID---ERVKDLALKFGTQVPKSKLYRFP--KELASLPECLFHLRRGPLLGSIVGHEDERSVLRNLFLNASFDLSFRMLAPRCI-------------MHREGGTFEELPAYD----------LAMQSNAAVVLDHGTDIFIWLGAELAAQ---------------------EGQSAA--ALAACRTLAEELSELRFPAPRILSFKEGSSQARYFVSRLIPAHKDPTYEQESRFPQLRTLTPEQRSRLKSSF--IHFDDHSFCEWMRSL 854          
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|1026018164|ref|XP_016540047.1| (PREDICTED: protein transport protein SEC23 [Capsicum annuum])

HSP 1 Score: 87.0409 bits (214), Expect = 9.731e-15
Identity = 88/342 (25.73%), Postives = 136/342 (39.77%), Query Frame = 0
Query:   39 VTRVLSLRIQAKTTT-------QDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLF----PRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369
            +TRV+S+R+    +        QD  A  VL  KR +LR                   A     A   R  +D  +++I + F    P+   Y   +         EL    EV++   RGPLLG     ED    LR  FL    + + RM++P  L                 G   E +P  D          +A+     ++LD    + IW+G E        +D ++G                   +L ACR  AE+  + RFP P+++   EG    R+  + LIP HKDPP    +RFP LR++ PE+   L++ F  +  +D S  +++  L
Sbjct:  603 ITRVISVRLPTVDSVSSYLQSVQDEVAA-VLIAKRTLLR-------------------AKNANDALDMRATIDERIKDITSKFGSQMPKSKLYQFPK---------ELSLLPEVLFHLRRGPLLGSILGHEDERSVLRNLFLNAAFDLSLRMVAPRCL-------------MHRQGGTFEELPAYD----------LAMQSDAAVVLDHGTDVFIWLGAE--------LDAQEG---------------KGAAALAACRTLAEELTEMRFPAPRILAFKEGSSQARYFVSRLIPGHKDPPYEQEARFPQLRTLTPEQRTKLKSSF--LYFDDPSFCEWMRSL 867          
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|743769009|ref|XP_010914784.1| (PREDICTED: protein transport protein SEC23 [Elaeis guineensis])

HSP 1 Score: 87.0409 bits (214), Expect = 1.007e-14
Identity = 68/236 (28.81%), Postives = 101/236 (42.80%), Query Frame = 0
Query:  134 ELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369
            EL    E ++   RGPLLG     ED    LR  FL    + + RML+P  L                 G   E +P  D          +A+  +  ++LD    + IW+G E A                        G  AA  +L ACR  AE+  ++RFP P+++   EG    R+  + LIP HKDPP    +RFP LR++ PE+   L++ F  +  +D S  +++  L
Sbjct:  677 ELSSLPENLFHLRRGPLLGNIVGHEDERSVLRNLFLHASFDLSLRMLAPRCL-------------MHREGGTFEELPAYD----------LAMQSNAAVVLDHGTDVFIWLGAELAAQ---------------------EGKSAA--ALAACRTLAEELTENRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRTLTPEQRTKLKSSF--LHFDDYSFCEWMRSL 864          
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|702489356|ref|XP_010035379.1| (PREDICTED: protein transport protein SEC23 [Eucalyptus grandis] >gi|629080306|gb|KCW46751.1| hypothetical protein EUGRSUZ_K00564 [Eucalyptus grandis])

HSP 1 Score: 86.6557 bits (213), Expect = 1.220e-14
Identity = 70/236 (29.66%), Postives = 101/236 (42.80%), Query Frame = 0
Query:  134 ELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369
            EL    E+++   RGPLLG     ED    LR  FL    + + RM++P  L                 G   E +P  D          +A+     ++LD    + IW+G E A       DE               G  AA  +L ACR  AE+  + RFP P+++   EG    R+  + LIP HKDPP    +RFP LRS+  E+   L+N F  +  +D S  +++  L
Sbjct:  679 ELSLLPELLFHLKRGPLLGSIVGHEDERSVLRNLFLNASFDLSLRMVAPRCL-------------MHREGGTFEELPAYD----------LAMQSDTAVVLDHGTDIFIWMGAELA------ADE---------------GKNAA--TLAACRTLAEELTESRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYDQEARFPQLRSLTAEQRTKLKNSF--LHFDDPSFCEWMRSL 866          
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|1175847188|ref|XP_020577189.1| (protein transport protein SEC23 [Phalaenopsis equestris])

HSP 1 Score: 86.6557 bits (213), Expect = 1.400e-14
Identity = 77/269 (28.62%), Postives = 110/269 (40.89%), Query Frame = 0
Query:  105 SVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRLTPAA 373
            ++ E ++ +  R    + K   F  P   EL    E+++   RGPLLG     ED    LR  FL    E + RMLSP  L                 G   E VP  D  +Q           +  ++LD    + IW+G E +       DE               G  AA  +L ACR  AE+  + RFP P+++   EG    R+  + LIP HKDPP    +RF  LRS+   +   L+  F    T+D S  +++     AA
Sbjct:  656 TIDERVKDIASRFGLMLPKSKLFRFP--KELSSLPEILFHLRRGPLLGSIVGHEDERSVLRNLFLNSSYELSLRMLSPRCL-------------MHREGGTFEEVPSYDLSMQS----------NAAVVLDHGTDIFIWLGNELS------ADE---------------GKSAA--ALAACRTLAEELSEQRFPAPRILSFKEGSSQARYFVSRLIPAHKDPPYEQEARFAQLRSLSTAQRARLKASF--FHTDDPSFCEWMRSFKLAA 874          
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|1150733024|ref|XP_020277253.1| (protein transport protein SEC23 [Asparagus officinalis] >gi|1150733026|ref|XP_020277254.1| protein transport protein SEC23 [Asparagus officinalis])

HSP 1 Score: 86.2705 bits (212), Expect = 1.608e-14
Identity = 79/280 (28.21%), Postives = 117/280 (41.79%), Query Frame = 0
Query:   90 AAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369
            A   T A   R  VD  V++I + F    + + K   F  P   EL    E ++   RGPLLG     ED    LR  FL    + + RML+P  L                 G   E +P  D          +A+  +  ++LD    + IW+G E A                        G  AA  +L ACR  AE+  ++RFP P+++   EG    R+  + LIP HKDPP    +RFP LR++ P++   L+  F  +  +D S  +++  L
Sbjct:  632 AQNPTDAIDMRLTVDERVKDIASKF---GSQMPKSKLFRFP--KELSLLPENLFHLRRGPLLGNIVGHEDERSVLRNLFLNASFDLSLRMLAPRCL-------------MHREGGTFEELPAYD----------LAMQSNTAVVLDHGTDVFIWLGAELASQ---------------------EGKSAA--ALAACRTLAEELTENRFPAPRILSFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRTLTPDQRARLKASF--LHFDDYSFCEWMRSL 858          
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|1035919245|gb|OAY48835.1| (hypothetical protein MANES_05G009100 [Manihot esculenta])

HSP 1 Score: 86.2705 bits (212), Expect = 1.752e-14
Identity = 92/338 (27.22%), Postives = 137/338 (40.53%), Query Frame = 0
Query:   39 VTRVLSLRIQAKTTT-------QDHSALPVLALKRAVLRLSQQLAPGILASPGSGTAPAAATTAAAGARREVDSVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRL 369
            ++RV+++R+    +        QD  A  VL  KR +LR                   A   +AA   R  +D   E I+ +  +  + ++K   +  P   EL    E ++   RGPLLG     ED    LR  FL    E + RM++P  L                 G   E +P  D          +A+     ++LD    + IW+G E A       DE               G  AA  +L ACR  AE+  + RFP P+++   EG    R+  + LIP HKDPP    +RFP LRS+  ER   L+  F  +  +D S  +++  L
Sbjct:  603 ISRVITVRLPTVDSVSSYLGSVQDEVAA-VLIAKRTLLR-------------------AKNYSAAIDMRATID---ERIKDIALKYGSQLQKSKLYRFP--KELSLLPEFLFHLRRGPLLGNIVGHEDERSVLRNLFLNASFELSLRMVAPRCL-------------MHREGGTFEELPAYD----------LAMQSDTAVVLDQGTDVFIWLGAELA------ADE---------------GRSAA--ALAACRTLAEELTEVRFPAPRILAFKEGSSQSRYFVSRLIPAHKDPPYEQEARFPQLRSLTTERRTKLKCSF--IHFDDPSFCEWMRSL 867          
BLAST of EWM20907.1 vs. NCBI_GenBank
Match: gi|695073915|ref|XP_009384140.1| (PREDICTED: protein transport protein SEC23 [Musa acuminata subsp. malaccensis] >gi|695073917|ref|XP_009384141.1| PREDICTED: protein transport protein SEC23 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 86.2705 bits (212), Expect = 1.887e-14
Identity = 74/266 (27.82%), Postives = 113/266 (42.48%), Query Frame = 0
Query:  105 SVVEEIRTLFPRLHAYVRKRGGFGRPCGSELEGAVEVIYQGHRGPLLGRHQQGEDVACALRYRFLTLGLEEATRMLSPVLLSTGPLIVATSDATTEVSGNQGEAVPGGDRKLQPWPCQTMALWPHLVLLLDTQDRLVIWIGREAALMLAAGMDERDGPLSDPKYGEWLPGSEAAQQSLQACRAYAEQARQDRFPTPQVVEVVEGDPMERFLWASLIPTHKDPPDVLFSRFPALRSMQPERVEALRNQFSSMATEDESLQQYLDRLT 370
            +V E ++ +  +  + + K   F  P  +EL    E ++   RGPLLG     ED    LR  FL    + + RML+P  L                 G   E +P  D          +A+  +  ++LD    L IW+G E A                        G  AA  +L ACR  AE+  ++RFP P+++   EG    R+  + LIP HKDPP    +RF  LRS+ PE+   L++ F  +  +D S  +++  L 
Sbjct:  639 TVDERVKDIALKFGSQLPKSKLFRFP--NELSTLPESLFHLRRGPLLGNIIGHEDERSVLRNLFLNASFDLSLRMLAPRCL-------------MHREGGTFEELPAYD----------LAMQSNAAVVLDHGTDLFIWLGAELAAQ---------------------EGKSAA--ALAACRTLAEELTENRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFLQLRSLTPEQRARLKSSF--LHFDDYSFCEWMRSLN 854          
The following BLAST results are available for this feature:
BLAST of EWM20907.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100862|gb|EWM20907.1|0.000e+0100.00hypothetical protein Naga_100156g14 [Nannochlorops... [more]
gi|695036023|ref|XP_009405449.1|3.522e-1528.81PREDICTED: protein transport protein SEC23 [Musa a... [more]
gi|218188098|gb|EEC70525.1|6.429e-1526.63hypothetical protein OsI_01634 [Oryza sativa Indic... [more]
gi|1026018164|ref|XP_016540047.1|9.731e-1525.73PREDICTED: protein transport protein SEC23 [Capsic... [more]
gi|743769009|ref|XP_010914784.1|1.007e-1428.81PREDICTED: protein transport protein SEC23 [Elaeis... [more]
gi|702489356|ref|XP_010035379.1|1.220e-1429.66PREDICTED: protein transport protein SEC23 [Eucaly... [more]
gi|1175847188|ref|XP_020577189.1|1.400e-1428.62protein transport protein SEC23 [Phalaenopsis eque... [more]
gi|1150733024|ref|XP_020277253.1|1.608e-1428.21protein transport protein SEC23 [Asparagus officin... [more]
gi|1035919245|gb|OAY48835.1|1.752e-1427.22hypothetical protein MANES_05G009100 [Manihot escu... [more]
gi|695073915|ref|XP_009384140.1|1.887e-1427.82PREDICTED: protein transport protein SEC23 [Musa a... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9794rna9794Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications