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Properties
| Property Name | Value |
|---|
| Product | ribonuclease ii |
| Orig transcript id | gnl|cribi|Naga_100061g7.8549.mrna |
| Orig protein id | gnl|cribi|Naga_100061g7.8549 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:109773..112946 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9787 ID=rna9787|Name=rna9787|organism=Nannochloropsis gaditana|type=mRNA|length=2716bp
TAACAGGGAGTAGGAGGCCTGGGTCGTGTAGTCATTCAGCCGAGGGGACA
GAATGAGCTGGCTTTTACACGGCATGCGGCATGCCAGCGCTGGAAGGCAG
CGCCGTAGACCGCCACGCCAATGGCGGCTATGTAGGGGCTTTATTTTAGT
CTTGGCGTTCTCTGTCGTATCACAAGCACACGTACAAGACCTGTTGCGGA
GACGGCCACCACATCCACACCTTTCCTGGCTTTATCGTAAGGGCGGCGCG
ACGAATAATTCGTCCGTACCCAAGTCGGTCCACGAGCCCTTGTTTACTTC
CAGTCCTGCGCCATCGCCTCCTGTATCAACCCCCGAGGCAGAGGCGTTCC
CCGAGGCCCCTACCCCTGCCCTCCTCACCGATTACCCATCACGACCACGA
CGAAGCAAAGCCCGCCTCCTGCGTGACGCCGTCTTCCCCATTTACGGACG
AGAGGTCCATAAGTTCTTTTCCATGGGTATGATCAAGTTTTTAATAGTTT
TTGTGCTCACCATCACCCGAGACGTCAAGGACACGCTCATAGTCACCAGT
TGCGGCGCAGAGTCCATTGCATTCCTGAAGGTCTACGGTGTTTTGCCGGC
AGCAGCCGCGTTTACTGTGGCCTACTCCAAAATGTCCAACGCGCTGAGCA
AGGACGCACTCTACTACGCCTTGGTGGCGCCCTTCTTCCTCTTCTACCTC
CTCTTCGACCTGGTCATCTACCCTCGCCGGCACCAGCTCCATCCCACCGC
TACCGCCACGTCCTTCCAGGGCCTGAGCTACCTGCTGGGTCTTTATAATA
ACTGGACCTTTGCTCTCTACTACATCGTCTCGGAGATCTACTCCTCGGTC
TCGATCGGACTCCTGTTCTGGCAGTTCGCCAACGACGTGATCACGGTGGA
CGAGGCCAAGCGCTTTTACCCGCTCTTCGGCCAGCTTTCCTCCGTCGCCC
CCATCATCGCCGGTCAGTGCGTGGCCCGCGTGGCGGACGGTGGGGACTTC
GGGGGGAGCCTCCGGATCCTGACGGGCCTGACCACCCTGTGCGGGATGGG
CATCATGGTCCTGTACCACTACTGCTCCCGCCTTGTCCAGAAGGAGGCCA
GCGACGGACTCCTCACGTCCCACATGGTCAAGAACCTGCAGCAGAGCCGG
CCTCGGCCCCAGCTATCCCTTCAGGAGAGCGCCTCCTTCCTTCTGGGCTC
CCAGTACCTGCGGTACATGGCCGTGCTCGTCCTGGGCTTCGGCCTCGCCA
TCAACTTCACCGACATCCTCTGGAAATCGATGGTCAAGGACTACTTCCCG
GACAAACTCGCCTACCAACGCTTCATGGGCTTCTACTCCTCCACCGTGGG
CGCCACCACCTTCGTGGTCATTTTCTTCGGCAGTAACATCGTCAAGCACC
TCGGCTGGCGCATCGGCGCCCTGGCCACCCCCGTGATGATGGCCGCGCTG
GCCGTCCCTTTCTTCGCCGCCATCTTCCTCAAGGGCTTCGGGGCCAGCTC
CAAGCGCACGGCCCTCTTGGCCGTAGGGGCGGGGGCGCTGATGAGCGTCC
TCTCGAAAGCCACCAAATACGCGCTCTTCGATCCCACCACCCAGATGGCC
TACATCCCCCTGGACGAGGAGTCCAAGAGCAAGGGCAAGGCAGCCATCGA
CGTGCTCGGCTCCCGCGTCGGGAAGTCCTTGGGGGCGCTCCTCCTCCAGG
CCTGCGTGATGGTATTCGGCTCCGCCCTCCGGGCCTCCTACGTGGTGGGC
GGGATGTTCTACGCGGTCATCTTCTCCTGGATCTTCTCCGCCAACAATCT
GGCTGGGCTCTTCCAAGAGCTCACGGAGCGACCGCGCAAATACGGGGCAG
GCAGTGGCTTGGCGAGCGGCAGCACGGACAGTGGTGGTGGGAAGGGCGGC
GCGGGCAGCGACAGCAGTGGCGCCTCCACCGACGGGTCGGGGTCGGGGCC
TACGCCTGTCGCGGCCGCTCAGGAGGTCCCTCAGGAGGTGCCTGCCGAGG
TACCACCCTCGTCGTCCGCACCCTCGGCGTTCTTAGACGGTGGCCTGAAC
CCGCACATTGCCCCACCGCCAATAGAGGGGAGGGAGGAAGGGAGCGAGGA
AGGGGAGGAAGGCGAAGGCGGGGGGGAGGGCGAGGGTCGCTGTGGGCCGT
TGGAGGGTGAAGGGGAGGCGATCGCAATTCCCAGTACTGAATTTATGCAG
AGTGTAGCCTCGCAGGGAGCTGAGCGAGACATGTCTCTACCAAGGTCGAC
GGATCCCTCGCCCCCCTCTTTCCACTCCTCAGGTCCTGGCACTGCTCCAT
CTCAGGATTCCTCCTCCTTTCCTGCGCCGTAGACTCACACGTGAAAATCA
CTTTACACGAAAGACGGTCATGCGGAGGGAAGAAAGCACTTCAAGCCCGG
TAAAGCCAAACACCCGCACCCGCTGTCTTGACAGTCGGGTGTTCTTGGGC
ATAGAAATAGGAGAGTGAGGGCCAATCCGTCGAGAGGAAGTGGTGGCGAA
GGGAAGGGTCTAAGGGAGGCGAGAAAAACTCACATAGATCGGTAGATGAC
AGCAAACATGAAAATTGAATAAACTTTGACAGGGGTGCTCATCGTGCAGA
GCTTATAAGACTCGTGTTTTTTTAAAACAACGCAGGTTTATATCATGTCG
TTCGGGCCGTACGTGTACTTTCGCGCCAAAAACTCTTTCTCACGCCCTCT
TCCTCCTTGCGCTCCT back to topprotein sequence of rna9787 >rna9787-protein ID=rna9787-protein|Name=rna9787|organism=Nannochloropsis gaditana|type=polypeptide|length=959bp
MNLFSASNGICRQCRFRRRRRRGKEDTTTIPSTTLPPRSMLLLGLACALG
FTHPLHAFAPRSNLPPGFFSCSHVASRAGRPPAHAATSSRSPSSSATRIF
SALVREGEGEDEDKEEDWAMLEFKDMLLGGKKKAKPRAPKLPPRGPSPVQ
LQPESPVEIWHQGHLAFGNYEGRLKKASINVRLEHGERVAVDAGQLTGIW
AAPVTSEQEQTPASWALEEQEGGPATPEAWAVVRLRAGRAMKSLSPRALS
LERFWSLAMHRWRRDKAPVDSHHLAAFLFHRPEYEAVLKEEQQERTRESE
TLDGSGKDAFTLRLPNVSPAQRYAAAVLLAAETFRFKRSVPRVLSLGSQA
AGSKVGEESVPGLLVEGEGFRPMEQSVVHSREVLAFVQAVRHHEERRALL
RLDKLLEDTTEGGEEEEGGGEDGAGGGGWEEQPGGRAGSAQWDASQWRLL
HHLEVFSLGAGVEGLSSTSQQVLKALGEPTTPEGAKRVLLRAGYWTERRG
AEPGREDNVAAMTAAVQRMATPWPEDILELAKEALAKTQRRRAALAKVQR
PNRPGRRGPHGRHDYRASGLGAYALDPPGSEFADDALGFDPETGEVLIHI
ADVQALVEGTPELEALARQRGEAIYLPDGPLHLLPPPALQAASLSDREVN
ECVTAAVTLGPDGSVLNARLLLSLVPPITRIRYDEANELLSASSLEDLPA
YRRQAAQDLHVLLQASQARRALTKRSFSEGKRVSRVRRNTEGELEAIGFQ
RTPAHLMVDEFLALYSEAGRRFLKAHAVTLPLAPGSVSGGLDAARFGTGP
LRRYTDVLAQQQMVSVLKGRPPLSKSEVIRRMTQVNWQSKASQKLRSASR
GKVLLESFATYCAAKAKAAGQAYAVVRATATGTGTEVMLPDAGLRSYVRL
PGGWKKKGKDGAGSRRLFDLEAGKEFEVHVLRVDPARGSIELEFAREEDA
VGIPMQEEE back to topmRNA from alignment at KK037256.1:109773..112946- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna9787 ID=rna9787|Name=rna9787|organism=Nannochloropsis gaditana|type=mRNA|length=3174bp|location=Sequence derived from alignment at KK037256.1:109773..112946- (Nannochloropsis gaditana)
GACGGAAGTGTCTTTGCTGTTTGCGGCAACCCTCTAACCCATGTCTTGGC
CGGGCTCTAGGAGTATCCACATGCGCATGAGGTTGGCTGGGCCACATTAC
TTCACCCGACGTATTTCTAACCGCACGACCACCGAAACAAATTTTTAGGA
AGCGTCGACGATTGAATGAATCTTTTCAGTGCTAGCAATGGCATATGTCG
GCAGTGCAGGTTCCGGAGACGGAGAAGAAGAGGGAAGGAGGACACTACAA
CCATTCCAAGCACGACATTACCGCCCCGCTCCATGCTGCTGCTCGGCCTT
GCCTGCGCATTGGGATTCACACATCCTTTACACGCTTTCGCCCCGCGGTC
AAACTTGCCTCCCGGTTTCTTTTCCTGTTCTCACGTCGCGTCCAGAGCAG
GACGGCCGCCAGCACATGCCGCCACTTCCTCGCGCTCTCCGTCCTCCTCC
GCAACGAGAATTTTCTCCGCCCTGGTCCGAGAGGGTGAAGGCGAAGACGA
GGACAAAGAAGAGGATTGGGCAATGCTAGAGTTCAAGGACATGCTCTTGG
GCGGCAAAAAGAAAGCGAAGCCGCGGGCGCCGAAGCTCCCTCCTCGAGGC
CCCAGCCCCGTTCAGCTTCAGCCGGAAAGCCCCGTGGAGATATGGCACCA
GGGACACTTGGCCTTCGGGAACTACGAGGGACGCCTTAAAAAGGCATCGA
TCAACGTGCGGCTGGAGCACGGGGAAAGGGTGGCCGTGGACGCAGGGCAG
CTCACGGGGATATGGGCCGCCCCCGTCACGAGCGAGCAGGAGCAGACGCC
TGCGTCCTGGGCGTTGGAGGAGCAGGAGGGCGGTCCAGCGACGCCCGAGG
CGTGGGCGGTAGTGCGGCTGCGGGCAGGGAGGGCGATGAAGAGCCTGAGC
CCACGGGCCCTCTCATTGGAGCGCTTCTGGTCGTTGGCCATGCACCGGTG
GCGGCGGGACAAGGCCCCGGTCGACTCCCACCACCTGGCGGCCTTCCTCT
TCCACCGGCCCGAGTACGAGGCCGTGCTCAAGGAGGAGCAGCAGGAGCGC
ACGCGGGAGTCGGAGACCCTAGACGGGTCGGGGAAAGATGCCTTCACACT
GCGGCTGCCGAACGTCAGCCCCGCTCAGCGGTATGCAGCCGCTGTGCTCC
TGGCGGCGGAGACCTTTCGATTCAAACGCAGCGTGCCTCGGGTTTTGAGC
CTGGGATCTCAGGCGGCAGGGTCGAAGGTGGGAGAAGAGAGCGTGCCGGG
GTTGTTGGTGGAGGGGGAGGGGTTCCGGCCCATGGAGCAGTCAGTAGTGC
ACTCGAGGGAGGTGCTGGCCTTCGTGCAGGCGGTGCGTCACCATGAGGAG
AGGCGTGCCTTGCTCCGGTTGGACAAGCTGCTGGAGGATACTACGGAGGG
AGGGGAGGAGGAGGAGGGGGGGGGGGAGGACGGAGCAGGGGGAGGAGGCT
GGGAGGAGCAGCCGGGTGGCCGGGCGGGCTCGGCCCAGTGGGACGCCTCG
CAGTGGCGACTACTGCACCATCTGGAGGTGTTCAGCCTGGGGGCGGGGGT
GGAAGGGCTGTCGAGCACCTCCCAGCAGGTCCTGAAGGCACTTGGAGAGC
CGACCACGCCCGAAGGGGCCAAGCGGGTGCTCCTGCGGGCGGGGTATTGG
ACCGAGAGGCGGGGCGCGGAGCCGGGGCGGGAGGACAATGTGGCAGCGAT
GACGGCGGCGGTCCAGCGGATGGCCACGCCCTGGCCGGAGGATATCTTGG
AGCTGGCGAAGGAGGCGTTGGCCAAGACGCAGAGGCGACGGGCGGCCCTG
GCCAAGGTCCAGCGCCCGAACCGGCCGGGGCGGAGGGGTCCGCACGGCCG
CCACGACTACCGGGCCTCGGGCCTGGGGGCCTACGCCTTGGACCCGCCGG
GGTCGGAATTCGCAGACGACGCCCTGGGTTTCGATCCCGAGACGGGGGAG
GTGCTCATCCACATCGCGGACGTGCAGGCGTTGGTGGAGGGCACCCCGGA
GCTGGAGGCCCTGGCGCGGCAACGCGGGGAGGCGATCTACCTGCCTGACG
GGCCGTTGCACTTGCTACCCCCGCCCGCCCTCCAGGCGGCCTCCCTCAGC
GACCGGGAGGTGAACGAGTGTGTGACGGCGGCCGTGACGCTGGGCCCGGA
CGGCAGCGTCCTGAACGCCCGCTTGCTCCTGAGCCTAGTGCCCCCCATCA
CCCGCATCCGATACGACGAGGCCAACGAGCTGCTCTCCGCGTCCAGCCTC
GAGGACCTGCCTGCCTACCGGCGTCAGGCCGCGCAGGACCTGCACGTGTT
GCTGCAAGCCTCCCAGGCCCGACGTGCGTTGACGAAACGGAGCTTCTCGG
AGGGGAAACGCGTCTCGCGAGTGCGGCGGAACACCGAGGGGGAACTGGAG
GCCATCGGCTTCCAGCGCACGCCTGCGCACCTGATGGTGGACGAGTTCCT
GGCCCTATACTCGGAGGCGGGCCGCCGATTCCTCAAGGCCCACGCGGTCA
CCCTCCCCCTGGCCCCGGGCTCGGTCTCGGGCGGCCTGGACGCGGCGCGC
TTCGGCACTGGGCCCCTCCGGCGTTACACGGACGTGCTGGCGCAGCAGCA
GATGGTCTCCGTCTTGAAAGGCCGTCCCCCCTTGTCCAAGTCGGAAGTGA
TCCGGCGCATGACTCAGGTGAACTGGCAGAGTAAGGCCTCCCAGAAGCTC
CGCTCCGCCTCCAGGGGCAAGGTCCTCCTCGAGTCCTTCGCCACCTACTG
CGCCGCCAAAGCCAAGGCGGCCGGCCAGGCCTACGCAGTGGTCCGAGCCA
CGGCCACGGGGACGGGCACGGAGGTGATGCTGCCCGACGCGGGCTTGCGT
TCCTACGTGCGCCTGCCCGGGGGGTGGAAGAAGAAGGGGAAGGATGGGGC
CGGTTCCCGGCGGCTGTTTGATTTGGAGGCGGGAAAGGAGTTCGAGGTGC
ATGTTTTGCGGGTGGACCCGGCTAGAGGGAGCATCGAGCTGGAGTTTGCT
CGTGAGGAGGACGCGGTCGGGATACCGATGCAGGAGGAGGAATGAGGCGA
GGAGCGCAAGGAGGAAGAGGGCGTGAGAAAGAGTTTTTGGCGCGAAAGTA
CACGTACGGCCCGAACGACATGATATAAACCTGCGTTGTTTTAAAAAAAC
ACGAGTCTTATAAGCTCTGCACGA back to topCoding sequence (CDS) from alignment at KK037256.1:109773..112946- >rna9787 ID=rna9787|Name=rna9787|organism=Nannochloropsis gaditana|type=CDS|length=2880bp|location=Sequence derived from alignment at KK037256.1:109773..112946- (Nannochloropsis gaditana)
ATGAATCTTTTCAGTGCTAGCAATGGCATATGTCGGCAGTGCAGGTTCCG
GAGACGGAGAAGAAGAGGGAAGGAGGACACTACAACCATTCCAAGCACGA
CATTACCGCCCCGCTCCATGCTGCTGCTCGGCCTTGCCTGCGCATTGGGA
TTCACACATCCTTTACACGCTTTCGCCCCGCGGTCAAACTTGCCTCCCGG
TTTCTTTTCCTGTTCTCACGTCGCGTCCAGAGCAGGACGGCCGCCAGCAC
ATGCCGCCACTTCCTCGCGCTCTCCGTCCTCCTCCGCAACGAGAATTTTC
TCCGCCCTGGTCCGAGAGGGTGAAGGCGAAGACGAGGACAAAGAAGAGGA
TTGGGCAATGCTAGAGTTCAAGGACATGCTCTTGGGCGGCAAAAAGAAAG
CGAAGCCGCGGGCGCCGAAGCTCCCTCCTCGAGGCCCCAGCCCCGTTCAG
CTTCAGCCGGAAAGCCCCGTGGAGATATGGCACCAGGGACACTTGGCCTT
CGGGAACTACGAGGGACGCCTTAAAAAGGCATCGATCAACGTGCGGCTGG
AGCACGGGGAAAGGGTGGCCGTGGACGCAGGGCAGCTCACGGGGATATGG
GCCGCCCCCGTCACGAGCGAGCAGGAGCAGACGCCTGCGTCCTGGGCGTT
GGAGGAGCAGGAGGGCGGTCCAGCGACGCCCGAGGCGTGGGCGGTAGTGC
GGCTGCGGGCAGGGAGGGCGATGAAGAGCCTGAGCCCACGGGCCCTCTCA
TTGGAGCGCTTCTGGTCGTTGGCCATGCACCGGTGGCGGCGGGACAAGGC
CCCGGTCGACTCCCACCACCTGGCGGCCTTCCTCTTCCACCGGCCCGAGT
ACGAGGCCGTGCTCAAGGAGGAGCAGCAGGAGCGCACGCGGGAGTCGGAG
ACCCTAGACGGGTCGGGGAAAGATGCCTTCACACTGCGGCTGCCGAACGT
CAGCCCCGCTCAGCGGTATGCAGCCGCTGTGCTCCTGGCGGCGGAGACCT
TTCGATTCAAACGCAGCGTGCCTCGGGTTTTGAGCCTGGGATCTCAGGCG
GCAGGGTCGAAGGTGGGAGAAGAGAGCGTGCCGGGGTTGTTGGTGGAGGG
GGAGGGGTTCCGGCCCATGGAGCAGTCAGTAGTGCACTCGAGGGAGGTGC
TGGCCTTCGTGCAGGCGGTGCGTCACCATGAGGAGAGGCGTGCCTTGCTC
CGGTTGGACAAGCTGCTGGAGGATACTACGGAGGGAGGGGAGGAGGAGGA
GGGGGGGGGGGAGGACGGAGCAGGGGGAGGAGGCTGGGAGGAGCAGCCGG
GTGGCCGGGCGGGCTCGGCCCAGTGGGACGCCTCGCAGTGGCGACTACTG
CACCATCTGGAGGTGTTCAGCCTGGGGGCGGGGGTGGAAGGGCTGTCGAG
CACCTCCCAGCAGGTCCTGAAGGCACTTGGAGAGCCGACCACGCCCGAAG
GGGCCAAGCGGGTGCTCCTGCGGGCGGGGTATTGGACCGAGAGGCGGGGC
GCGGAGCCGGGGCGGGAGGACAATGTGGCAGCGATGACGGCGGCGGTCCA
GCGGATGGCCACGCCCTGGCCGGAGGATATCTTGGAGCTGGCGAAGGAGG
CGTTGGCCAAGACGCAGAGGCGACGGGCGGCCCTGGCCAAGGTCCAGCGC
CCGAACCGGCCGGGGCGGAGGGGTCCGCACGGCCGCCACGACTACCGGGC
CTCGGGCCTGGGGGCCTACGCCTTGGACCCGCCGGGGTCGGAATTCGCAG
ACGACGCCCTGGGTTTCGATCCCGAGACGGGGGAGGTGCTCATCCACATC
GCGGACGTGCAGGCGTTGGTGGAGGGCACCCCGGAGCTGGAGGCCCTGGC
GCGGCAACGCGGGGAGGCGATCTACCTGCCTGACGGGCCGTTGCACTTGC
TACCCCCGCCCGCCCTCCAGGCGGCCTCCCTCAGCGACCGGGAGGTGAAC
GAGTGTGTGACGGCGGCCGTGACGCTGGGCCCGGACGGCAGCGTCCTGAA
CGCCCGCTTGCTCCTGAGCCTAGTGCCCCCCATCACCCGCATCCGATACG
ACGAGGCCAACGAGCTGCTCTCCGCGTCCAGCCTCGAGGACCTGCCTGCC
TACCGGCGTCAGGCCGCGCAGGACCTGCACGTGTTGCTGCAAGCCTCCCA
GGCCCGACGTGCGTTGACGAAACGGAGCTTCTCGGAGGGGAAACGCGTCT
CGCGAGTGCGGCGGAACACCGAGGGGGAACTGGAGGCCATCGGCTTCCAG
CGCACGCCTGCGCACCTGATGGTGGACGAGTTCCTGGCCCTATACTCGGA
GGCGGGCCGCCGATTCCTCAAGGCCCACGCGGTCACCCTCCCCCTGGCCC
CGGGCTCGGTCTCGGGCGGCCTGGACGCGGCGCGCTTCGGCACTGGGCCC
CTCCGGCGTTACACGGACGTGCTGGCGCAGCAGCAGATGGTCTCCGTCTT
GAAAGGCCGTCCCCCCTTGTCCAAGTCGGAAGTGATCCGGCGCATGACTC
AGGTGAACTGGCAGAGTAAGGCCTCCCAGAAGCTCCGCTCCGCCTCCAGG
GGCAAGGTCCTCCTCGAGTCCTTCGCCACCTACTGCGCCGCCAAAGCCAA
GGCGGCCGGCCAGGCCTACGCAGTGGTCCGAGCCACGGCCACGGGGACGG
GCACGGAGGTGATGCTGCCCGACGCGGGCTTGCGTTCCTACGTGCGCCTG
CCCGGGGGGTGGAAGAAGAAGGGGAAGGATGGGGCCGGTTCCCGGCGGCT
GTTTGATTTGGAGGCGGGAAAGGAGTTCGAGGTGCATGTTTTGCGGGTGG
ACCCGGCTAGAGGGAGCATCGAGCTGGAGTTTGCTCGTGAGGAGGACGCG
GTCGGGATACCGATGCAGGAGGAGGAATGA back to top
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