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Properties
| Property Name | Value |
|---|
| Product | nf-x1-like transcription factor |
| Orig transcript id | gnl|cribi|Naga_100061g13.8557.mrna |
| Orig protein id | gnl|cribi|Naga_100061g13.8557 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:96263..99512 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9781 ID=rna9781|Name=rna9781|organism=Nannochloropsis gaditana|type=mRNA|length=2545bp
TTTCCCACCGCAATAACCTGCCATGCATACAATCGACACAGGCTTCGGGA
TTCACTGCGTCCATTCAGAGCTCGCAGACAACGGAGGCCAATCTCGACAT
TCTCAGCAAGGAGCGGCTCTGGGCGGTGTGGCGGTATCATCCCTGTCTCC
CCTGACGCTACGGCACCACTGCCGCGCAAATCCCCAGCCTCTGGAGCCAT
CGCGCTCACAAGTCATCGGAAAAACTATGAAAAACCTACGGAGGGTGTTT
TTCCTACTCCTGCTGATGCTCCTTGCAGCTGAGCATGCCGTTTCTTTCAT
CTTTCCCCTCTCCACTAGCCCAAGTACAAGCAGAAGAGACGCCGCGAGGG
CGTCGTGGCGTCGCTGCTCCCGCGCCCCACCTCACCAAAGCGCCTTGTCA
CGCCTTCAAGCCACTACTGAAGGCGCTAAGGTGGCGGCGAAAGTTGCCAA
GGACAAAGAGTCGGGGGATCGCGAGAGGAAGGATGACAAGAACAAGCCAA
CCGCCATGGCCACGGCGGCGGAGCTGGGGAAGTACGACGTGAAGCGAGTC
CGCAACTTCAGCATCATCGCACACATCGATCACGGCAAGAGCACGCTGGC
CGATCGGCTTCTGGAGTCGACCAAGACGGTGGCGACGCGGGACATGAAGG
CCCAGCTTCTGGACAGCATGGACATCGAGCGGGAGCGGGGAATCACCATC
AAGCTGAACGCGGCGCGGATGCTCTACCGGGCCAAGGACGGAGAGGACTA
CATTTTGAACCTGATCGACACCCCGGGCCACGTGGACTTCTCCTACGAGG
TCTCGCGCTCCCTGGCCGCCTGCGAGGGCGCCCTGCTGGTGGTGGACGCC
TCCCAGGGCGTGGAGGCCCAGACCCTGGCGAACGTCTACCTGGCGCTCGA
GAACGACCTGGAGATCATCCCCGTCCTGAACAAGATCGACCTGCCGGCCG
CGGACCCGGACCGGGTGCAGGAGGAGATCGAGCAGACGGTGGGCCTGGAC
TGCACGGAGGCGGTGAGGGCCTCGGCCAAGAGCGGCATCGGGATCGACGA
CATATTGGAGCAAATCGTGGCTCGCGTACCCCCTCCCGCGCCGCCCACGG
GGGGGCCGCTCAAGGCGCTCATCTTCGACAGCTATTACTGCCCCTACCGC
GGGGTGGTGGTCTACTTCCGGGTAGTCGACGGGGAGATTCGGCCCAAGGA
CCGGGTCAAGTTCATGGCGAGCGGGAAGGAGTATGAGGTGGTGGAGGTGG
GTTTCATGACGCCGGAGAAGCGGGCGGTGGAGGTGCTGCGGGCGGGGGAG
GTGGGCTACCTCTCCGCGGCCATCAAGGCGGTGGAGGACGCGCGGGTGGG
TGACACCATCACGAGCGCCCGGGGAGGGGCCTCCGACGCCTTGCCGGGCT
ACGCCGAGGCCAACCCCACCGTGTTCGCGGGGCTCTTCCCCGTGGACGCA
GACCAGTTTGAGGTGCTGCGGGAGAGCTTGGGGAAGCTGAAGCTGAGCGA
CGCGGCCATCTCCTTTGAGCCGGAGAAGAACTCGGCCATGGGCTTCGGGT
TCCGGGTAGGCTTTCTGGGCTTGCTGCACATGGACATCGTGCAGGAGCGT
CTGGAGCGGGAATACAACCTGGACTTGATTGTGACGGCGCCCTCGGTCGT
CTACAAAGTCCTGACCAACAGGGACGAGGAGATCTCCATCGACACGCCCG
CCAAGCTGCCCCCCGCCACCGAGCGCAAGGCCATCTACGAGCCGTACGTG
CGCGTGGAGATGCTGGCGCCCACGGACTACACGGGCAGCCTGATGGAGCT
GGCGCAGGACAAGCGGGGGGAGCTGAAGGAGATGAAGTACCTGACCCCCA
CGCGGACGGCGCTCATATACGACATGCCCCTCGCGGAGGTGATAACGGAC
TTCTTCGACGAGCTTAAGAGCCGCAGCAAGGGCTATGCCTCCATGGAGTA
CAGCCTGGTCGGCTACCGCGAGAACGACCTGGTGCGCCTGGACGTGAGGA
TCAACGACGAGGAGGCGACCCCCCTCGCCTGCATCGTCCACCGTGACAAG
TCCTACGCGGTGGGGAAGGCCCTCACAGAGAAGCTCAAGGAGCTGATTCC
CCGCCAAATGTTTAAGGTGCCGATCCAGGCCTGCATTGGCGGGAAAGTGG
TCGCCTCCTGCGCCCTCTCCGCCATGCGAAAGGACGTTCTGGCCAAGTGC
TACGGGGGCGACGTGAGCAGGAAGAAGAAGTTGCTGCAGAAGCAGGCGAA
GGGGAAGAAGCGGATGAAGACCATGGGGAAGGTCTCAGTGCCTCAGGAGG
CCTTTCAGGCTGTCTTGAAGCTCAAGAGCACCAATTAGGCGTCGCCGGTG
AGGGAAAGGGGGCTGGGCGGCTGAGGGCGGTGCCAAGGCGCTCGGATGTA
CAGAATTAGGAGTAAGGGGAGGGGGGCAGAGCGGTGACGAGAGGGAGAGA
CGGACAGGGGTAGAGGAAGGGAGGAGTGGCGCTCCTGCGAGGGTCTTGGA
AGAAACAGAACACTAACCAGACGTCACATGACAAGAGATTCGGCC back to topprotein sequence of rna9781 >rna9781-protein ID=rna9781-protein|Name=rna9781|organism=Nannochloropsis gaditana|type=polypeptide|length=556bp
MLTRNRRFAEALGIAKAVQGQALTLAQVRGEEGGEGGQEMDAFRLELERP
VYPRELLDWAISPATKMDVLRLERKIAAFLSDKKEASLYLKPMAKEERRR
VHLLAEFYGLRSLSYDNEPRRFVALIKAPAVGPSGDNSSAGGLPGPTGAR
APVVLLSEAAAAEVLARRHTGAHSNGSSAHSGASLPLAPLLTPPLPPSSA
SLLVANIGELSGKTVTDRLRCLYPALPLLGYHFREPPPDASPRLEPFPPA
LVVHLGSVQALAALLDEAKARPADLHPFVLKASLGGASVVIRPVAPPPGT
KAAKGGNLEPPQGQSSAQDGQQRWGSSVLPGRLKPRSLPPPSSTVSSSSS
PLSSASTPHKVAETRSTTIGALLATGSHVNKQRGRTKGGNAGHEGGKLRG
GGARSDQVELQPGQGIASNRWAWLEMDGDDGDSEEEEEEREEEEEEHEEE
EEEKQERKEEEKECRAGADKGFNRDGVRDGGAETDREGNRREGMKTTALS
MDERVGDGTEGIGVGEEGEEEEEWEEEELEVACSACTFKHLCDYCPMCMT
PRPTGR back to topmRNA from alignment at KK037256.1:96263..99512+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9781 ID=rna9781|Name=rna9781|organism=Nannochloropsis gaditana|type=mRNA|length=3250bp|location=Sequence derived from alignment at KK037256.1:96263..99512+ (Nannochloropsis gaditana)
GGCGCATGAccaaggagggcagaaggagagACAAGCAGAAGAAGTACAGG
ATGGGTTCCGGGAGAGCAGGCCTCCTGATTGCCCGTCCGAGCAGGCAGGC
GATGAGCGGACAAGGGGGGTGTCTCCATGCGGCAGGGAAAGAGTCggggg
ggccagggagcgcggaggagagggcttgGTGGCGAGCTGCGTCATTTGCG
CAGAGACGTTTGACAGCGGCAAGCACCGGCCTGCCGTGGGGGCATGCGAC
CACGGAGGCATCTGCGCCCTCTGCTTCAtgcgcctccgcctgctcaTGGA
GGACAGGGCCTGCCCGCTCTGCAAGGCCTCGCTCGAGCATGTCTATGTCT
TCAACGGCGACGCGACGACCATGCAGCCTTTCGCCTCCCTGAATATATGG
GGCACGGAGGCAGGGCCTGGCTACGTCTACGACGAGCGCGCGAGCATGTT
CATGCCCCGGGCCTTCCACCGGGACGTCTTCGCCCCCATGCAGGGCTTCC
GTTGCTCTCCGGCCGAGAGCAACGCCTGCCGGTACGAGGGCAAGGACCTC
CGGGAGCTGAGGGCGCATTTGCAGCTGGCGCACGCCCAGTACCTTTGTGA
GGTGTGCCTAAGCCACAAGAAAGTGTTCGTGGGCGAGCAGACCCGCTACG
CCAAGAAGGCGCTGGCCGGGCACatggagcacggggaggccGACGCAGGC
TTCTCGGGCCACCCTCGCTGCAAATTCTGCCGCAACAAGCCTTTCTACGA
CCTGactgccctcttccaccacctccgtTCCGCCCACTACTCCTGCGACG
TCTGCGAGCGCCTGCGCCAGCAAGAgggcctcccaccctctcaccGGTAC
CACCGAGACTACCCGGCCCTAGAGCGGCACTTTCGGCAGGAGCACCACCT
CTGTGAAGACCCTGTCTGCCTCTCGGAGCGTTTCGTCGTCTTCGCGCACG
CCTTGGACTTGAGGGTGCACGTCCAGGCCAGGCACGCGGGCCAAGGGCGC
TCGCGGCGACTCGAGCTAGACGTGTCCGCCTTCCGGGTTCGCgggcagca
gggagggagggaggggccgagggagggagagggggagggcgaaggggagc
gAACCTTGGAATGGACGCCGACTCGGTACCTGGCCCCGGCCACcgggggg
ccagggagggagggagcgggggagggaggggggagggggcgggcgacgaC
CTGGGGCGGTGATTGTAGATCCCTtggctttccccgccctggccgcgGAT
GCTTCCTCTGGGCGCAACGACGCCTCTGGTCGTGTGCCTTCGCAGGCTCA
GGACAGAGGAGAGCAGCGCCGGTCGGGGTCGGCgtgggggacgggaggag
gaagatccgggtatcctgcTTTGGGCCCCCCGCCCACAATTGCCggcgcc
acctcccgccctcggttCCCATCTACCCGTTCTCAAGCTGTGCCGCCACT
CCAGCGGGCGCTAAAGCAACTCAAAATACCCGCAATAAGCGTttcgggag
aaggggagggagggagcagtggGGCAAGCGGGAgcggcggggatggaggg
cgggatgacCCCATGCTCACACGGAACCGACGCTTTGCCGAGGCTTTAGG
TATCGCGAAGGCCGTGCAAGGACAGGCCCTTACCCTTGCACAGGtccgag
gagaggaagggggggagggaggtcaagAGATGGACGCCTTCCGGCTGGAG
TTGGAGCGGCCTGTGTACCCCCGCGAGCTTTTGGACTGGGCGATCAGCCC
GGCGACTAAGATGGACGTGCTGCGGCTAGAGAGGAAGATCGCAGCCTTCT
TGTCTGACAAGAAAGAGGCCTCCTTGTACCTGAAGCCCATGGCCAAAGAG
GAGCGACGGCGGGTCCACCTCCTGGCCGAGTTCTACGGCCTCCGGAGCCT
CTCCTACGACAATGAGCCGCGCCGCTTCGTGGCCCTGATCAAGGCCCCCG
CGGTCGGCCCATCCGGTGATAATAGCAGCGCTGGAGGCCTCCCCGGACCC
ACAGGGGCTCGagctcccgtcgtcctcctctcagaggcggcggccgccga
gGTCTTGGCGAGACGCCACACGGGCGCACACAGCAACGGGAGCAGCGCTC
ACTCCGGCGCCagccttcctcttgcccccctcctgacgcctccccttccc
ccgtcttccgcctccctcctcgtcgcgaACATCGGGGAGCTCTCTGGCAA
GACCGTCACCGAccgcctccgctgcctctaccctgccctccccctcctcg
gctaCCACTTCCGCGAGCCTCctcccgacgcctccccccgcctagagccc
ttcccgcccgcccttgtcGTCCACCTGGGCTCGGtccaggccctggccgc
cctcctggacgaggccaaaGCCCGCCCCGCGGacctccaccccttcgtcc
tcaAGGCTTCTCTCGGGGGCGCCTCCGTGGTGATCAGGCCCGTGGCCCCG
CCGCCGGGAACGAAAgcggccaagggagggaactTGGAGCCACCGCAAGG
ACAGTCGTCGGCGCAGGACGGGCAGCAGCGGTGGGGCAGCAGCGTCCTGC
CGGGCCGTCTAAAGCCTCGTTCGCtgccgcctccgtcctccacagtctcg
tcttcctcctcccccctctcctccgcttccacccCGCACAAGGTGGCTGA
GACCCGTTCCACTACCATCGGTGCCTTGTTGGCAACTGGGAGTCATGTCA
ACAAacagaggggaaggactaAGGGCGGGAATGCGGGGCATGAGGGCGGA
AAgctgaggggaggaggggcacggtCCGACCAGGTGGAGCTCCAGCCCGG
ACAGGGGATCGCGAGTAACCGATGGGCGTGGCTAGAGATGGATGGGGACG
ACGGAGatagcgaggaagaggaggaggagagggaagaagaagaagaagaa
cacgaagaagaagaagaagaaaaacaagaaaggaaggaggaggaaaaaga
atgcAGAGCAGGGGCAGACAAAGGTTTTAATAGGGACGGGGTGAGGGACG
GCGGAGCGGAAACAGATAGGGAAGGAAATAGGAGAGAAGGCATGAAGACC
ACAGCGCTCTCCATGGACGAAAGAGTAGGGGATGGTACCGAGGGAATCGG
Ggttggggaggaaggagaagaggaggaggagtgggaggaagaggagctag
AGGTGGCGTGCTCCGCGTGCACGTTCAAGCATCTGTGCGACTACTGCCCC
ATGTGTATGACCCCGCGGCCCACGGGGCGATGAGAAAGCCTTTCTCGCTG
back to topCoding sequence (CDS) from alignment at KK037256.1:96263..99512+ >rna9781 ID=rna9781|Name=rna9781|organism=Nannochloropsis gaditana|type=CDS|length=1671bp|location=Sequence derived from alignment at KK037256.1:96263..99512+ (Nannochloropsis gaditana)
ATGCTCACACGGAACCGACGCTTTGCCGAGGCTTTAGGTATCGCGAAGGC
CGTGCAAGGACAGGCCCTTACCCTTGCACAGGtccgaggagaggaagggg
gggagggaggtcaagAGATGGACGCCTTCCGGCTGGAGTTGGAGCGGCCT
GTGTACCCCCGCGAGCTTTTGGACTGGGCGATCAGCCCGGCGACTAAGAT
GGACGTGCTGCGGCTAGAGAGGAAGATCGCAGCCTTCTTGTCTGACAAGA
AAGAGGCCTCCTTGTACCTGAAGCCCATGGCCAAAGAGGAGCGACGGCGG
GTCCACCTCCTGGCCGAGTTCTACGGCCTCCGGAGCCTCTCCTACGACAA
TGAGCCGCGCCGCTTCGTGGCCCTGATCAAGGCCCCCGCGGTCGGCCCAT
CCGGTGATAATAGCAGCGCTGGAGGCCTCCCCGGACCCACAGGGGCTCGa
gctcccgtcgtcctcctctcagaggcggcggccgccgagGTCTTGGCGAG
ACGCCACACGGGCGCACACAGCAACGGGAGCAGCGCTCACTCCGGCGCCa
gccttcctcttgcccccctcctgacgcctccccttcccccgtcttccgcc
tccctcctcgtcgcgaACATCGGGGAGCTCTCTGGCAAGACCGTCACCGA
ccgcctccgctgcctctaccctgccctccccctcctcggctaCCACTTCC
GCGAGCCTCctcccgacgcctccccccgcctagagcccttcccgcccgcc
cttgtcGTCCACCTGGGCTCGGtccaggccctggccgccctcctggacga
ggccaaaGCCCGCCCCGCGGacctccaccccttcgtcctcaAGGCTTCTC
TCGGGGGCGCCTCCGTGGTGATCAGGCCCGTGGCCCCGCCGCCGGGAACG
AAAgcggccaagggagggaactTGGAGCCACCGCAAGGACAGTCGTCGGC
GCAGGACGGGCAGCAGCGGTGGGGCAGCAGCGTCCTGCCGGGCCGTCTAA
AGCCTCGTTCGCtgccgcctccgtcctccacagtctcgtcttcctcctcc
cccctctcctccgcttccacccCGCACAAGGTGGCTGAGACCCGTTCCAC
TACCATCGGTGCCTTGTTGGCAACTGGGAGTCATGTCAACAAacagaggg
gaaggactaAGGGCGGGAATGCGGGGCATGAGGGCGGAAAgctgagggga
ggaggggcacggtCCGACCAGGTGGAGCTCCAGCCCGGACAGGGGATCGC
GAGTAACCGATGGGCGTGGCTAGAGATGGATGGGGACGACGGAGatagcg
aggaagaggaggaggagagggaagaagaagaagaagaacacgaagaagaa
gaagaagaaaaacaagaaaggaaggaggaggaaaaagaatgcAGAGCAGG
GGCAGACAAAGGTTTTAATAGGGACGGGGTGAGGGACGGCGGAGCGGAAA
CAGATAGGGAAGGAAATAGGAGAGAAGGCATGAAGACCACAGCGCTCTCC
ATGGACGAAAGAGTAGGGGATGGTACCGAGGGAATCGGGgttggggagga
aggagaagaggaggaggagtgggaggaagaggagctagAGGTGGCGTGCT
CCGCGTGCACGTTCAAGCATCTGTGCGACTACTGCCCCATGTGTATGACC
CCGCGGCCCACGGGGCGATGA back to top
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