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Properties
| Property Name | Value |
|---|
| Product | delta-6 fatty acid desaturase |
| Orig transcript id | gnl|cribi|Naga_100061g21.8548.mrna |
| Orig protein id | gnl|cribi|Naga_100061g21.8548 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:74023..76187 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9773 ID=rna9773|Name=rna9773|organism=Nannochloropsis gaditana|type=mRNA|length=2301bp
CCGGTGGGCCCTGCAAGTCCTTGGCCAACTCCACTCACGAAATTTTCTTC
CAAATGTCACAGCCATGCTTTCGCAAACTGGAACTGGATGGAAGTAGGAC
ACCAGAGTGTGCGGGCTTGCAGATTTCGGTCTTAATATGGCGACTTCTCT
TCAAGGTTTCCCGTCCGAGCAAGCTACCGCACATACTTTACATACGAAGA
CAATACGTCTACCAGGACTCCACCGTCTGCTCCTTCGTGTGCAAATCGCT
GATCTGCCTCCCAGCAGACGGGCGCTTTGGAAGGACACGCATCACCAAAT
GCGAGATGTTGTTGCTCTTGCCGGAACGACAGCAAAAACAATTATTCGTA
CTTTGATAGAGTCGGAGATCCCCGCTGTGTCTGACCGTGATATAGCGCGT
TTTGCCCTTGTGATGGTGTACCCAACGAGGGAGGTCGACGGGAGTTTAAC
ACATCTGATGCGCACGTTGAACCCTCACGAGCGGCCCATCAAATTGGTAA
ACTCTATGCTTGTAGAAATGGAAGAAATGTCAAAGGGCACACGGAAAGAG
GGGGTCAGGGCCATCGGCATGGCAGACTCCACGGGCGGGTGTCCTGACTC
CTCCGATGAGGGGGCCCCGGGAGGCGGTCGTGAGGCAAACTACGAGACAC
AATACGGGCCGCAGATAGGCCGCGATAAGGGCGAAGGACTCATAAGAGTT
ATGAGCCCGAGAACGGCCTTTACCCGCGAGCAGCTCTTGGACGAGCACCT
CCTAAGCTGGGTTCTCAAGGACACGGAGGGCCCGCCTTTGGACTTCCCGG
GGTACCTGAGCGGCCCTGAGGCCTCGGACGACGAGACGTCGCCGACTTGT
CCAGCGGCCTCCTGGTTCAGCGACCAGGCGGGGTGGAGCAAGCCCGGCTT
GTCGGGTTATCTTCTGAAGCGATCCTCCCGGGACCCGTGTCTTTGGCGCC
GCCGCTGGTGCGTCTTGGGGGAGGACAAATTCTGGTACATGAAAGCGAAG
CATCGACGGAGCATGCGGGGAAAGGCGGCTTTTATCGCTCTGATGGGCAT
GCAGGTCCTGGACCTGGAATGTGGCGAAGGAGAGAGCCGAGAGCTGCAGC
GCGTGGCCCCCTTGGGCGTGGAGGTGCAGACCGCCGACCGGGTCTTCGTC
TTCCGAGCCCTCAGCCGCGAGCAGCAGGCGGAGTGGGTGCAGGCGATGAG
GAGGGGAGTGAGACTGGCGACGGAGAATGAGTGGTTAGCAATGGCTGAGC
TGGTTGTGGGAGAGGAAGAAAAAGCGAGGGAGAGGAGGATCGAGGGTGTA
GTAGAGCGGGCTTGGGCTGCTTGCACAGAAAGAGGCAGGGATAATTGGAA
ATTCGAAGAAGGGGTAACGAAAGGAAAAGAGTGTAACGCGTCCTTAAACG
TCGAGATGGGAGTCGCGGGGGCCGAAGAGAGGCACCCCGAAACTCGCCAT
GTTCCGTCCGCTCGTCTAAGCGTGGAGAGGGAGAGCCGCGGGATGGTGAA
GAGTCGAGCGAGAGAGCTCTTGCGTGCAAAAGGCTCAAACTTATTAGGCA
AGGGAGGGATAAATGCGGAGGGAAAAGTTGAAAGAGATAGAAGGGAGAAA
GACGGAAGACGGATGGAGCTGTCGGAATTACTTGGCTTCGCGATCGCAGT
CCAGGAATACAGGGAGGTTTGCCGCTTGGGAGATGGTCCCGTACTGGCTT
CGTCCTTGAAAATGTGGGCAAAGGCACAAGCTGTCTACGATGCGTTCTTG
AGGAGGTGGGTGCGACTTCTTCATGATCTGGAGAGAGAAAGGGGGGCTAC
GGGAGGGCTGCTAAAGGAGGAAGGAAGGGACGGCAGTGTCTTGCCGGAAT
GGGCTGGAGCCATTTATATAGAGCGACAGCTTTTGGAGTACGCGGCCTGC
GAGCGAAGACAGAGGGGAGGGGCTTCATTGTCAAGAGGGGCCGCTAGGCA
AGGGAAGAAGGATGACAAAAGAGCCGGGACGGCCAAGACTAAGCTCCGAG
CTCTTCCCCGTCTGCTGAACAAGCATGGCGATTCCTTCGCGGCTGATCCA
ATCAATACAGCTCCCTCGGTCTCATTAGAATGTGAAGAAGCTGAGCTAGG
ACGGTCTTTACCGCCCCCACCCAAAGAACTCTTCGACGAGACTCTTCAGG
AGCTTGAAAGAAGTGCGCAATTGATCATAGAACGCGATTCAAACAAGAGG
AATGAGGAGGAGTAACGGAAGACTAGAATCCGCGAGGCGTGAGCCTTTAT
TGGCGCACTTTTAAAAGAAAGTAAGTAAAAATGCAGGTAGCTGCGAAAAG
G back to topprotein sequence of rna9773 >rna9773-protein ID=rna9773-protein|Name=rna9773|organism=Nannochloropsis gaditana|type=polypeptide|length=475bp
MGRGGERVETQESIATYSASKSGDIRQHGGKITWDEVRQHKTPQDAWLVY
RNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGE
LVPGSDKKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALA
VGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGD
LAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPI
LAWSLKMADRAKEYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEH
VPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALMFCNMSLTRVL
IYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGG
WLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSM
WEGTREVLAHLASVTKEFVTDFPAM back to topmRNA from alignment at KK037256.1:74023..76187- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9773 ID=rna9773|Name=rna9773|organism=Nannochloropsis gaditana|type=mRNA|length=2165bp|location=Sequence derived from alignment at KK037256.1:74023..76187- (Nannochloropsis gaditana)
ATCTATCGTACACCCATAGTGCACGATCTGCGCCTTGATGTGGCCGGATC
CGGTTTGGTAATTGGGAAATTGTGCGCCTCATAATGAATGCTCACCTGTC
GGATCGCGACGACAACCACCCGTAGTAAGCGAAGTTTGATGACGCGCGAA
CTACATTTGTCATAAGATGCAGTGAGAAAGCACTTGATTTCCTATCTCGT
GCAGTGCTGTCTCTCCTCATTATGGTGGTCTCTCTTTTCCCTATTCGTAG
GTCGAGCACCTGGTGGTAGCAAGTAGGTCAGTCAAACGGTGATAGCATCA
AGACATCAGTATGGGACGCGGTGGTGAAAGAGTGGAGACGCAAGAGTCTA
TAGCTACTTACTCGGCAAGCAAAAGTGGTGACATCAGGCAGCATGGGGGT
AAAATTACTTGGGATGAGGTGAGAAAGCGATGGAATCGAGATAAGCGGTA
GTGATGGGAGGGATGACGTTTCGTCTGATGCCAATCTAGTCGTCCCAAAT
CAAAACTATGGCAGACTGTGCCTAACTTCTCCCTTAGTTGAAGCGTTGAC
TCTTATTTGATGCATGTGGCTTATTCATCCGTCCGCCTTTGCAGGTGCGT
CAACACAAGACCCCTCAAGATGCGTGGCTCGTCTACCGCAACAAAGTCTA
CGACGTGTCAGGCTGGCAAGATCATCCTGGGGGGAATGTCATCTTTACGC
ATGCGGGGGGTGACTGTACTGACATCTTTGCAGCCTTCCACCCTTTGGGT
GCGACATCTTACATGGATCCCTTCTACATTGGCGAGCTCGTTCCCGGCTC
TGACAAAAAGCCCGAGGCGCAAGCCAGCTTCGAGCGAGCGTATCGAGACT
TGAGGGGGAAACTCATCACGGGCGGGTTCTTCAAGGCGAGTCCTTTGTAC
TATGTGTGGAAAGTCGTGTCCACCGTCGCCCTGGCCGTGGGTGCCTGGAT
GCTCGTCGGCTGGTCCCAAGCCCTGTCGATTCAGATGCTCTCTGCCTTCA
TCCTCGCCCTCTTCTGGCAGCAGTGCGGGTGGCTGGCCCATGACTTCTTG
CACCATCAAGTTTTCAAAGAGCGAGCATACGGCGATCTCGCGGGGATCAT
GATCGGCAATGTATTCCAGGGCTTCTCGGTGGCCTGGTGGAAGAACAAGC
ACAACACTCATCACGCCGTGCCCAACCTTGTCGAGTCCTCTCCAGACGCC
CAGGACGGTGATCCCGACATTGACACCATGCCCATCCTGGCCTGGTCCCT
GAAGATGGCGGACCGCGCAAAGGAATACTCGTGGGGCCCTTTCTTCCTCC
GGCATCAGGCTTTCCTCTACTTTCCCATCCTCCTTGTCGCCCGCATCTCC
TGGCTCTTGCAATCCTTCCTTTTTGTCTTCGAACACGTCCCCGGTGCAAG
CTTATGGGCTACGAAAGGCGCAACGACCGAGCGACAGGCCATAAAGAACG
TGGGACTAGAGAAAGCGGGGCTTCTCCTTTACTATTTGTGGTACGGCGCT
CTCATGTTCTGCAACATGTCTCTTACGCGGGTCCTGATCTACTTCGTGGC
TTCTCAGATGATGTGCGGCTTTCTCTTGGCCCTCGTCTTCGGCCTCGGCC
ACAACGGCATGGCGGTCTACGACGCCGACGCCCGCCCGGACTTCTGGAAA
CTGCAAGTGACGACCACGAGAAATGTGACGGGGGGCTGGTTGATACAATG
GTTCTGTGGCGGTCTTGGCTACCAAGTAGACCACCACCTTTTTCCAATGA
TTCCGCGCCACCGTCTTGGTCAGTTACACGGTTTGGTGGAATCTTTCTGC
AAGGAGCATGGGGTAAAGTATCACGAGACAAGTATGTGGGAAGGGACACG
GGAGGTGTTGGCCCACTTGGCGAGCGTGACAAAAGAATTCGTAACAGATT
TCCCAGCAATGTAGTTGATCGAAATATACCCGGTTGTCGGAGCGATTGGT
AAACTATAAACAACTGAGATAGATACAGTCTTATGGGAAGAGCAGGAAAA
ACAGGAAGAAAAAAGCTCTGTTGAAATCGTTTTTCGTGGTCCCTTTTGAA
AAAAATATGGAAGCTCAAATGCTGATTATTTGTTGGTGTTTTCCTGCGTT
TCCATGTGTTTTACTTAAAATGTACAGAAGTGGGATGACAGCTCTCAACC
AGAGGACAGAAGAAA back to topCoding sequence (CDS) from alignment at KK037256.1:74023..76187- >rna9773 ID=rna9773|Name=rna9773|organism=Nannochloropsis gaditana|type=CDS|length=2856bp|location=Sequence derived from alignment at KK037256.1:74023..76187- (Nannochloropsis gaditana)
GTGCGTCAACACAAGACCCCTCAAGATGCGTGGCTCGTCTACCGCAACAA
AGTCTACGACGTGTCAGGCTGGCAAGATCATCCTGGGGGGAATGTCATCT
TTACGCATGCGGGGGGTGACTGTACTGACATCTTTGCAGCCTTCCACCCT
TTGGGTGCGACATCTTACATGGATCCCTTCTACATTGGCGAGCTCGTTCC
CGGCTCTGACAAAAAGCCCGAGGCGCAAGCCAGCTTCGAGCGAGCGTATC
GAGACTTGAGGGGGAAACTCATCACGGGCGGGTTCTTCAAGGCGAGTCCT
TTGTACTATGTGTGGAAAGTCGTGTCCACCGTCGCCCTGGCCGTGGGTGC
CTGGATGCTCGTCGGCTGGTCCCAAGCCCTGTCGATTCAGATGCTCTCTG
CCTTCATCCTCGCCCTCTTCTGGCAGCAGTGCGGGTGGCTGGCCCATGAC
TTCTTGCACCATCAAGTTTTCAAAGAGCGAGCATACGGCGATCTCGCGGG
GATCATGATCGGCAATGTATTCCAGGGCTTCTCGGTGGCCTGGTGGAAGA
ACAAGCACAACACTCATCACGCCGTGCCCAACCTTGTCGAGTCCTCTCCA
GACGCCCAGGACGGTGATCCCGACATTGACACCATGCCCATCCTGGCCTG
GTCCCTGAAGATGGCGGACCGCGCAAAGGAATACTCGTGGGGCCCTTTCT
TCCTCCGGCATCAGGCTTTCCTCTACTTTCCCATCCTCCTTGTCGCCCGC
ATCTCCTGGCTCTTGCAATCCTTCCTTTTTGTCTTCGAACACGTCCCCGG
TGCAAGCTTATGGGCTACGAAAGGCGCAACGACCGAGCGACAGGCCATAA
AGAACGTGGGACTAGAGAAAGCGGGGCTTCTCCTTTACTATTTGTGGTAC
GGCGCTCTCATGTTCTGCAACATGTCTCTTACGCGGGTCCTGATCTACTT
CGTGGCTTCTCAGATGATGTGCGGCTTTCTCTTGGCCCTCGTCTTCGGCC
TCGGCCACAACGGCATGGCGGTCTACGACGCCGACGCCCGCCCGGACTTC
TGGAAACTGCAAGTGACGACCACGAGAAATGTGACGGGGGGCTGGTTGAT
ACAATGGTTCTGTGGCGGTCTTGGCTACCAAGTAGACCACCACCTTTTTC
CAATGATTCCGCGCCACCGTCTTGGTCAGTTACACGGTTTGGTGGAATCT
TTCTGCAAGGAGCATGGGGTAAAGTATCACGAGACAAGTATGTGGGAAGG
GACACGGGAGGTGTTGGCCCACTTGGCGAGCGTGACAAAAGAATTCGTAA
CAGATTTCCCAGCAATGTAGATGGGACGCGGTGGTGAAAGAGTGGAGACG
CAAGAGTCTATAGCTACTTACTCGGCAAGCAAAAGTGGTGACATCAGGCA
GCATGGGGGTAAAATTACTTGGGATGAGGTGCGTCAACACAAGACCCCTC
AAGATGCGTGGCTCGTCTACCGCAACAAAGTCTACGACGTGTCAGGCTGG
CAAGATCATCCTGGGGGGAATGTCATCTTTACGCATGCGGGGGGTGACTG
TACTGACATCTTTGCAGCCTTCCACCCTTTGGGTGCGACATCTTACATGG
ATCCCTTCTACATTGGCGAGCTCGTTCCCGGCTCTGACAAAAAGCCCGAG
GCGCAAGCCAGCTTCGAGCGAGCGTATCGAGACTTGAGGGGGAAACTCAT
CACGGGCGGGTTCTTCAAGGCGAGTCCTTTGTACTATGTGTGGAAAGTCG
TGTCCACCGTCGCCCTGGCCGTGGGTGCCTGGATGCTCGTCGGCTGGTCC
CAAGCCCTGTCGATTCAGATGCTCTCTGCCTTCATCCTCGCCCTCTTCTG
GCAGCAGTGCGGGTGGCTGGCCCATGACTTCTTGCACCATCAAGTTTTCA
AAGAGCGAGCATACGGCGATCTCGCGGGGATCATGATCGGCAATGTATTC
CAGGGCTTCTCGGTGGCCTGGTGGAAGAACAAGCACAACACTCATCACGC
CGTGCCCAACCTTGTCGAGTCCTCTCCAGACGCCCAGGACGGTGATCCCG
ACATTGACACCATGCCCATCCTGGCCTGGTCCCTGAAGATGGCGGACCGC
GCAAAGGAATACTCGTGGGGCCCTTTCTTCCTCCGGCATCAGGCTTTCCT
CTACTTTCCCATCCTCCTTGTCGCCCGCATCTCCTGGCTCTTGCAATCCT
TCCTTTTTGTCTTCGAACACGTCCCCGGTGCAAGCTTATGGGCTACGAAA
GGCGCAACGACCGAGCGACAGGCCATAAAGAACGTGGGACTAGAGAAAGC
GGGGCTTCTCCTTTACTATTTGTGGTACGGCGCTCTCATGTTCTGCAACA
TGTCTCTTACGCGGGTCCTGATCTACTTCGTGGCTTCTCAGATGATGTGC
GGCTTTCTCTTGGCCCTCGTCTTCGGCCTCGGCCACAACGGCATGGCGGT
CTACGACGCCGACGCCCGCCCGGACTTCTGGAAACTGCAAGTGACGACCA
CGAGAAATGTGACGGGGGGCTGGTTGATACAATGGTTCTGTGGCGGTCTT
GGCTACCAAGTAGACCACCACCTTTTTCCAATGATTCCGCGCCACCGTCT
TGGTCAGTTACACGGTTTGGTGGAATCTTTCTGCAAGGAGCATGGGGTAA
AGTATCACGAGACAAGTATGTGGGAAGGGACACGGGAGGTGTTGGCCCAC
TTGGCGAGCGTGACAAAAGAATTCGTAACAGATTTCCCAGCAATGTAGAT
GGGACGCGGTGGTGAAAGAGTGGAGACGCAAGAGTCTATAGCTACTTACT
CGGCAAGCAAAAGTGGTGACATCAGGCAGCATGGGGGTAAAATTACTTGG
GATGAG back to top
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