EWM20915.1, cds9742 (CDS) Nannochloropsis gaditana

Overview
NameEWM20915.1
Unique Namecds9742
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:75770..75877 -
Alignment locationKK037256.1:74274..75593 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20915.1
Productdelta-6 fatty acid desaturase
Orig transcript idgnl|cribi|Naga_100061g21.8548.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:75770..75877 -
KK037256.1supercontigKK037256.1:74274..75593 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR012171Fatty_acid_desaturase
IPR001199Cyt_B5-like_heme/steroid-bd
IPR005804Fatty_acid_desaturase-1
Homology
BLAST of EWM20915.1 vs. NCBI_GenBank
Match: gi|585100871|gb|EWM20915.1| (delta-6 fatty acid desaturase [Nannochloropsis gaditana])

HSP 1 Score: 986.867 bits (2550), Expect = 0.000e+0
Identity = 475/475 (100.00%), Postives = 475/475 (100.00%), Query Frame = 0
Query:    1 MGRGGERVETQESIATYSASKSGDIRQHGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGSDKKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAKEYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALMFCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGWLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEFVTDFPAM 475
            MGRGGERVETQESIATYSASKSGDIRQHGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGSDKKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAKEYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALMFCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGWLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEFVTDFPAM
Sbjct:    1 MGRGGERVETQESIATYSASKSGDIRQHGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGSDKKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAKEYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALMFCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGWLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEFVTDFPAM 475          
BLAST of EWM20915.1 vs. NCBI_GenBank
Match: gi|1154501349|gb|AQX92135.1| (delta-6 fatty acid desaturase [Nannochloropsis oceanica])

HSP 1 Score: 894.034 bits (2309), Expect = 0.000e+0
Identity = 420/475 (88.42%), Postives = 451/475 (94.95%), Query Frame = 0
Query:    1 MGRGGERVETQESIATYSASKSGDIRQHGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGSDKKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAKEYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALMFCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGWLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEFVTDFPAM 475
            MGRGGERVET ES+ +++A K+G I+Q GGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSY+DPFYIGEL PGSDKKP AQA+FERAYRDLRGKLI GGFFKA+PLYYVWKVVSTVALAVGAW+LV WSQ L +QMLSAF++ALFWQQCGWLAHDFLHHQVFK RA GDLAGI+IGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRA++YSWGPFF+RHQ+ LYFPILLVARISWL+QSFLFVF+ VPGASLWATKGAT ERQAIKNVGLEK GL+ +YLWYGALM C+MSL R L+YF+ASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTG WL+QWFCGGLGYQVDHHLFPMIPRHRLG+LHGLVE FCK+HGVKYHET+MWEGT+EVLAHL+SVTKEFV DFPAM
Sbjct:    1 MGRGGERVETTESL-SFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWVLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPAM 474          
BLAST of EWM20915.1 vs. NCBI_GenBank
Match: gi|306415487|gb|ADM86708.1| (delta-6 desaturase [Nannochloropsis oculata])

HSP 1 Score: 888.641 bits (2295), Expect = 0.000e+0
Identity = 417/475 (87.79%), Postives = 450/475 (94.74%), Query Frame = 0
Query:    1 MGRGGERVETQESIATYSASKSGDIRQHGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGSDKKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAKEYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALMFCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGWLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEFVTDFPAM 475
            MGRGGERVET ES+ +++A K+G I+Q GGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSY+DPFYIGEL PGSD+KP AQA+FERAYRDLRGKLI GGFFKA+PLYYVWKVVSTVALAVGAW+LV WSQ L +QMLSAF++ALFWQQCGWLAHDFLHHQVFK RA GDLAGI+IGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRA++YSWGPFF+RHQ+ LYFPILLVARISWL+QSFLFVF+ VPGASLWATKGAT ERQAIKNVGLEK GL+ +YLWYGALM C+MSL R L+YF+ASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTR+VTG WL+QWFCGGLGYQVDHHLFPMIPRHRLG+LHGLVE FCK+HGVKYHET+MWEGT+EVLAHL+SVTKEFV DFP M
Sbjct:    1 MGRGGERVETTESL-SFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDRKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWVLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRSVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPPM 474          
BLAST of EWM20915.1 vs. NCBI_GenBank
Match: gi|931187210|gb|ALG35825.1| (delta 6 fatty acid desaturase [Isochrysis sp. SKMKUIso1])

HSP 1 Score: 662.914 bits (1709), Expect = 0.000e+0
Identity = 323/417 (77.46%), Postives = 352/417 (84.41%), Query Frame = 0
Query:   36 EVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGSDKKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQ-VFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAK-EYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALMFCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGWLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSM 450
            +VRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSY+DPFYIGEL PGSDKKP AQA+FERAYRDLRGKLI GGFFKA+PLYYVWKVVSTVALAVGAWMLV WSQ L +QMLSAF++ALFWQQCGW+ HDFLH   +++   +GDLAGI+IG            + HNTHH               DPDIDTMPI           + +YSWGPFF+RHQ+ LYFPILLVA ISWL+QSFLFVF+ VPGASLWATKGAT ERQAIKNVGLEK GL+ +YLWYGALM C+MSL R L+YF+ASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTG WL+QWFCGGLGYQVDHHLFPMIPRHRLG+LHGLVE  CK+HGVKYHET+M
Sbjct:   86 QVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWVGHDFLHPPGIYEPVRWGDLAGIVIGT----------SSSHNTHHM----------GGKEDPDIDTMPIPGPGRSRWPTGRSKYSWGPFFVRHQSLLYFPILLVAWISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGLCKDHGVKYHETNM 482          
BLAST of EWM20915.1 vs. NCBI_GenBank
Match: gi|299116858|emb|CBN74970.1| (delta-6 fatty acid desaturase [Ectocarpus siliculosus])

HSP 1 Score: 587.8 bits (1514), Expect = 0.000e+0
Identity = 279/442 (63.12%), Postives = 334/442 (75.57%), Query Frame = 0
Query:   35 DEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGSD-KKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAKEYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALMFCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGWLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEFVTDFPAM 475
            +EV++H+TP DAW++YRNKVYDVSGW +HPGGNVIFTHAG D TDIFAAFHP  A + ++PFYIG+L   S   KP AQ +FER+YR+LR KL+T G + + P YYV      +AL   +   V WS    + ML A ++A+FWQQCGWLAHDFLHHQVFK RAYGDLAG+  GN+ QGFSV WWKNKHNTHHAVPNL ESS DA DGDPD+DTMP+LAWS+KMA+ AK+ +   F + HQAFLYFPILL+AR+SW++QSFLFVF  +PGA+LW TKGA T         LE   L+ + +W   L F N+   + L +F  +Q  CG  LALVFGLGHNGMA YDADARPDFWKLQVTTTRNVT    + WFCGGL YQVDHHLFP IPRH L ++H LVESFCK+H V YHE SMWEGT+EVL+HL+ V+ EF+ +FPAM
Sbjct:   24 EEVQKHRTPSDAWMIYRNKVYDVSGWHEHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAAQRAFERSYRELRSKLLTMGMYNSDPWYYVMVCSRQMALWAASVACVVWSDRWDVNMLGACLMAVFWQQCGWLAHDFLHHQVFKNRAYGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGDPDMDTMPVLAWSIKMAEAAKDTTVSRFLIGHQAFLYFPILLIARVSWVMQSFLFVFNGLPGANLWTTKGADTFVPKSLANKLESPALIGHLVWMSYLAF-NLGFVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKQHDVHYHEASMWEGTKEVLSHLSDVSAEFIAEFPAM 464          
BLAST of EWM20915.1 vs. NCBI_GenBank
Match: gi|51860649|gb|AAU11444.1| (fatty acid desaturase [Glossomastix chrysoplasta] >gi|51860651|gb|AAU11445.1| fatty acid desaturase [Glossomastix chrysoplasta])

HSP 1 Score: 554.673 bits (1428), Expect = 0.000e+0
Identity = 276/479 (57.62%), Postives = 347/479 (72.44%), Query Frame = 0
Query:    1 MGRGGERVETQESIATYSASKSGDIRQHGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGEL-VPGSD---KKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAKEYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALMFCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGWLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEFVTDFPAM 475
            MG+GG            + +  G+  +   K T +E+++H+TPQDAW+V+ NKVYDVS + DHPGG VIF+HAG D TD+FAAFHP  A ++MD F IG +   GS    +K  +QASFE+AYR+LR +L   G FKAS L+Y +KV+ST+AL + +W LV  S    + ++ A  LALFWQQCGWLAHDFLHHQVF+ RA+GDLAGIMIGNV+QGFSVAWWKNKHNTHH+VPNL ES PDA DGDPDIDTMP+LAWSL+MA  A + +   +F+ HQAF YFPIL +AR+SWL  SF FVF + P A  W TK     +Q + N  LE+AGLL++Y W  AL  C  SL R L +F  +    G LLA+VFGLGHNGMA+Y+A+ARPDFWKLQVTTTRN+TG   + WFCGGL +QV+HHLFP +PRH L + H +V +FCKE GVKYHE  +  GT+E+L+ L+ VT EF+ +FPAM
Sbjct:    1 MGKGGRD----------AGAVGGEAEKTLPKFTLEEIQKHRTPQDAWMVHHNKVYDVSNYMDHPGGLVIFSHAGDDMTDVFAAFHPPSAFNFMDKFLIGVVDSKGSSPQLQKDASQASFEKAYRNLRVQLKKAGMFKASSLFYTYKVLSTLALCLVSWGLVLGSDHFGVHLVGALFLALFWQQCGWLAHDFLHHQVFQNRAHGDLAGIMIGNVWQGFSVAWWKNKHNTHHSVPNLYESQPDAADGDPDIDTMPLLAWSLRMAKNA-DNALSRWFVSHQAFCYFPILGLARLSWLEGSFSFVFSN-PLA--WKTKNLDVAKQLVTNPLLEQAGLLVHYAWVFALCACTGSLVRALAFFFVATCTSGLLLAIVFGLGHNGMALYEANARPDFWKLQVTTTRNITGSPFVHWFCGGLQFQVEHHLFPSLPRHNLPRAHEIVTAFCKEQGVKYHEADLLTGTKEILSCLSEVTTEFLDEFPAM 465          
BLAST of EWM20915.1 vs. NCBI_GenBank
Match: gi|224003715|ref|XP_002291529.1| (probable microsomal delta-6 desaturase [Thalassiosira pseudonana CCMP1335] >gi|60172984|gb|AAX14505.1| delta-6 fatty acid desaturase [Thalassiosira pseudonana] >gi|220973305|gb|EED91636.1| probable microsomal delta-6 desaturase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 516.153 bits (1328), Expect = 8.766e-178
Identity = 266/495 (53.74%), Postives = 339/495 (68.48%), Query Frame = 0
Query:    1 MGRGGERVETQESIATYSASKSGDIR--QHGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGS-DKKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMA------DRAKEYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALM--FCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGG-----WLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEF----VTDFPAM 475
            MG+GG+        A  +  +SG ++  +   K TW EV++H TP DAW+V++NKVYDVS W DHPGG V+FTHAG D TDIFAAFH  G+ + M  FYIG+L+P S + K + Q  FE+ YRDLR KL+  G FK+S +YY +K    + + + A  +V +S +L++ + SA +L LFWQQCGWLAHDFLHHQVFK+R YGDL GI  G++ QGFS+ WWKNKHN HHAVPNL  SS D+QDGDPDIDTMP+LAWSLK A      ++ K+ ++  + ++ QAF YFPILL+ARISWL +SF   F    GA+    K    E++ ++   LEK G+ L+Y W   L   F   SL   ++YF  +    G  LALVFGLGHNGM+VYDA  RPDFW+LQVTTTRN+ GG     + + WFCGGL YQVDHHLFPM+PR+ + + H LVESFCKE GVKYHE  MW+GT EVL HL+ V+ +F    V DFPAM
Sbjct:    1 MGKGGD--------AAAATKRSGALKLAEKPQKYTWQEVKKHITPDDAWVVHQNKVYDVSNWYDHPGGAVVFTHAGDDMTDIFAAFHAQGSQAMMKKFYIGDLIPESVEHKDQRQLDFEKGYRDLRAKLVMMGMFKSSKMYYAYKCSFNMCMWLVAVAMVYYSDSLAMHIGSALLLGLFWQQCGWLAHDFLHHQVFKQRKYGDLVGIFWGDLMQGFSMQWWKNKHNGHHAVPNLHNSSLDSQDGDPDIDTMPLLAWSLKQAQSFREINKGKDSTFVKYAIKFQAFTYFPILLLARISWLNESFKTAFG--LGAASENAK-LELEKRGLQYPLLEKLGITLHYTWMFVLSSGFGRWSLPYSIMYFFTATCSSGLFLALVFGLGHNGMSVYDATTRPDFWQLQVTTTRNIIGGHGIPQFFVDWFCGGLQYQVDHHLFPMMPRNNIAKCHKLVESFCKEWGVKYHEADMWDGTVEVLQHLSKVSDDFLVEMVKDFPAM 484          
BLAST of EWM20915.1 vs. NCBI_GenBank
Match: gi|572103925|dbj|BAO27782.1| (delta6 desaturase-a [Fistulifera solaris] >gi|1210513749|dbj|GAX27326.1| Delta8-fatty-acid desaturase [Fistulifera solaris])

HSP 1 Score: 514.612 bits (1324), Expect = 3.122e-177
Identity = 263/471 (55.84%), Postives = 328/471 (69.64%), Query Frame = 0
Query:   21 KSGDIR--QHGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGSDK-KPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAKEYSWG-------PFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQA--IKNVGLEKAGLLLYYLWYGALM--FCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGW-----LIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEFVTDF 472
            K GD        KI+W +V++H TP DAW+VY+NKVYDVS W +HPGG VIFTHAG D TDIFAAFH  G+ + M  FYIG+L+PGS++ K E Q +FE+ YRDLR KLI  G FK++  +YV+K VS + L   A  +V +S+++++ M SA +L LF+QQCGWLAHDFLHHQVF++R YGDL GI  GN+ QG+SV WWKNKHN HHAVPNL  S+  +QDGDPDIDTMP+LAWSLK A   +E            F +R+QA+ YFPILL+AR+SWL +SF   F    GA   A++ A  E +A  ++   LEKAG+LL+Y W   +   F    +     YF+ +   CGFLLA+VFGLGHNGMA YDADARPDFWKLQVTTTRN+TGG       + WFCGGL YQVDHHLFP +PRH L + H LV SFCKE  V YHE  + +GT EVL HL+ V+ +F+ DF
Sbjct:    3 KGGDASAANKANKISWSQVKEHCTPDDAWVVYQNKVYDVSNWHEHPGGAVIFTHAGDDMTDIFAAFHAPGSQNLMQKFYIGDLIPGSNQNKTEHQIAFEKGYRDLRSKLILMGMFKSNGWFYVYKCVSNMMLWATAVAMVYYSESVAVHMASAVLLGLFFQQCGWLAHDFLHHQVFRQRKYGDLGGIYWGNLMQGYSVQWWKNKHNGHHAVPNLHNSTALSQDGDPDIDTMPLLAWSLKQAQSYRELQADGKDSASVKFLIRYQAYFYFPILLLARLSWLNESFKTAFG--LGA---ASENAALELKAKGLQYPILEKAGILLHYAWMFVVSSGFGRFPVWYATTYFLVATASCGFLLAIVFGLGHNGMATYDADARPDFWKLQVTTTRNITGGHGFPQAFVDWFCGGLQYQVDHHLFPSLPRHNLAKTHALVRSFCKEWNVHYHEADLVDGTIEVLQHLSKVSNDFLLDF 468          
BLAST of EWM20915.1 vs. NCBI_GenBank
Match: gi|572103923|dbj|BAO27781.1| (delta6 desaturase-b [Fistulifera solaris] >gi|1210513565|dbj|GAX27437.1| Delta8-fatty-acid desaturase [Fistulifera solaris])

HSP 1 Score: 512.686 bits (1319), Expect = 1.318e-176
Identity = 262/471 (55.63%), Postives = 327/471 (69.43%), Query Frame = 0
Query:   21 KSGDIR--QHGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGSDK-KPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAKEYSWG-------PFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQA--IKNVGLEKAGLLLYYLWYGALM--FCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGW-----LIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEFVTDF 472
            K GD        KI+W +V++H TP DAW+VY+NKVYDVS W +HPGG VIFTHAG D TDIFAAFH  G+ + M  FYIG+L+PGS++ K E Q +FE+ YRDLR KLI  G FK++  +YV+K VS + L   A  +V +S+++++ M SA +L LF+QQCGWLAHDFLHHQVF++R YGDL GI  GN+ QG+SV WWKNKHN HHAVPNL  S+  +QDGDPDIDTMP+LAWSLK A   +E            F +R+QA+ YFPILL+AR+SWL +SF   F    GA   A++ A  E +A  ++   LEK G+LL+Y W   +   F    +     YF+ +   CGFLLA+VFGLGHNGMA YDADARPDFWKLQVTTTRN+TGG       + WFCGGL YQVDHHLFP +PRH L + H LV SFCKE  V YHE  + +GT EVL HL+ V+ +F+ DF
Sbjct:    3 KGGDASAANKANKISWSQVKEHCTPDDAWVVYQNKVYDVSNWHEHPGGAVIFTHAGDDMTDIFAAFHAPGSQNLMQKFYIGDLIPGSNQNKTEHQIAFEKGYRDLRSKLILMGMFKSNGWFYVYKCVSNMMLWATAVAMVYYSESVAVHMASAVLLGLFFQQCGWLAHDFLHHQVFRQRKYGDLGGIYWGNLMQGYSVQWWKNKHNGHHAVPNLHNSTALSQDGDPDIDTMPLLAWSLKQAQSYRELQADGKDSASVKFLIRYQAYFYFPILLLARLSWLNESFKTAFG--LGA---ASENAALELKAKGLQYPILEKVGILLHYAWMFVVSSGFGRFPVWYAATYFLVATASCGFLLAIVFGLGHNGMATYDADARPDFWKLQVTTTRNITGGHGFPQAFVDWFCGGLQYQVDHHLFPSLPRHNLAKTHALVRSFCKEWNVHYHEADLVDGTIEVLQHLSKVSNDFLLDF 468          
BLAST of EWM20915.1 vs. NCBI_GenBank
Match: gi|397567873|gb|EJK45829.1| (hypothetical protein THAOC_35538 [Thalassiosira oceanica])

HSP 1 Score: 513.072 bits (1320), Expect = 1.561e-176
Identity = 266/493 (53.96%), Postives = 330/493 (66.94%), Query Frame = 0
Query:    1 MGRGGER-VETQESIATYSASKSGDIRQHGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGSDKKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKM------ADRAKEYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALM--FCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGG-----WLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEFVT----DFPAM 475
            MG+GG+  V     I         D      K TWDEV++H TP DAW+VY NKVYDVSGW DHPGG VIFTHAG D TDIFAAFH  G+ + +  FYIG+L+  S KK + Q  FE+ YRDLR KL+  G FKAS  +Y +K +  + + + A  +V +S + ++ + SA +L LFWQQCGWLAHDFLHHQVFK R YGDLAGI  G++ QG+S+ WWKNKHN HHAV NL  SS ++ DGDPDIDTMP+LAWSLK       A+  K+ ++    +R QAF YFPILL+ARISWL +SF   +    GAS  A   A  ER+ ++   LEK G+ L+Y W   L   F   S+   ++YF  +   CGF LA VFGLGHNGM+VYDA+ RPDFW LQVTTTRN+ GG     + + WFCGGL YQV+HHLFPMIPRH   ++H LV+SFCKE GVKYHE  M +GT EVL HL +V+ +F+     DFPAM
Sbjct:    1 MGKGGDAAVGASRKIQLIGGDDKVD------KYTWDEVKKHITPDDAWVVYHNKVYDVSGWYDHPGGGVIFTHAGDDMTDIFAAFHAQGSQAMIKKFYIGDLIVESTKKDQRQIDFEKGYRDLRAKLVMMGMFKASKGFYAYKCLFNMCMWLTAVAMVYFSDSTAVHVGSALLLGLFWQQCGWLAHDFLHHQVFKHRKYGDLAGIFWGDLMQGYSMQWWKNKHNGHHAVTNLHNSSLESLDGDPDIDTMPLLAWSLKQAQSFRAANNGKDTAFVRTAIRFQAFTYFPILLLARISWLNESFKTAYG--IGAST-ANAKAEMERKGLQYPLLEKVGIALHYTWMAILTTGFGQWSIPYSMMYFFTATCSCGFFLATVFGLGHNGMSVYDAETRPDFWNLQVTTTRNIIGGHGIPQFFVDWFCGGLQYQVEHHLFPMIPRHNAAKVHKLVDSFCKEWGVKYHEADMIDGTMEVLRHLQNVSDDFIVEMIKDFPAM 484          
The following BLAST results are available for this feature:
BLAST of EWM20915.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100871|gb|EWM20915.1|0.000e+0100.00delta-6 fatty acid desaturase [Nannochloropsis gad... [more]
gi|1154501349|gb|AQX92135.1|0.000e+088.42delta-6 fatty acid desaturase [Nannochloropsis oce... [more]
gi|306415487|gb|ADM86708.1|0.000e+087.79delta-6 desaturase [Nannochloropsis oculata][more]
gi|931187210|gb|ALG35825.1|0.000e+077.46delta 6 fatty acid desaturase [Isochrysis sp. SKMK... [more]
gi|299116858|emb|CBN74970.1|0.000e+063.12delta-6 fatty acid desaturase [Ectocarpus siliculo... [more]
gi|51860649|gb|AAU11444.1|0.000e+057.62fatty acid desaturase [Glossomastix chrysoplasta] ... [more]
gi|224003715|ref|XP_002291529.1|8.766e-17853.74probable microsomal delta-6 desaturase [Thalassios... [more]
gi|572103925|dbj|BAO27782.1|3.122e-17755.84delta6 desaturase-a [Fistulifera solaris] >gi|1210... [more]
gi|572103923|dbj|BAO27781.1|1.318e-17655.63delta6 desaturase-b [Fistulifera solaris] >gi|1210... [more]
gi|397567873|gb|EJK45829.1|1.561e-17653.96hypothetical protein THAOC_35538 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9773rna9773Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications