rna9771, rna9771 (mRNA) Nannochloropsis gaditana

Overview
Namerna9771
Unique Namerna9771
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1756
Alignment locationKK037256.1:68317..69400 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100061g23.8560.mrna
Orig protein idgnl|cribi|Naga_100061g23.8560
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:68317..69400 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100061g23gene9487Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9771rna9771-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20927.1cds9740Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9771 ID=rna9771|Name=rna9771|organism=Nannochloropsis gaditana|type=mRNA|length=1756bp
AATCCCTTTTCCACTCGAGCATCAGAGGGCCATCGCACACATTTGGACTT
GCTTTGATAAATTTTATCTCGTCGGAAAAAGAGTGAGAAGCCCGATGACG
ACTTCAGCGTGTTCCTCAATTTCCTTAGCGATCGCCCGTGCTTCTTATCG
TCTTTTCTAACTATTTTATTCGTTCACTCAGTAAGATATCATGGATGTAG
ATCGAAGTCAGTTGCTGGAGCAATACAGAGCCAAACTTCGCGAGCACCGG
GAAGTCGAACTCCGGGTCAAACAATTGCGTGAGCAAGTCCGGGGTCTAAG
CAAGGAGTACAGCAAGACGGAAGACGATCTCAAGGCCTTGCAGTCCGTGG
GCCAGATTATAGGCGACGTCCTCAAGCAGCTAGACGATGAGCGCTTCATA
GTCAAGGCCAGCAGTGGTCCCCGTTACGTCGTTGGATGTCGAAACAAGCT
AGAGAAGAACAAGCTGAAAGCCGGCACCCGTGTAAGCATGGATATGACGA
CCCTCACCATCATGCGCCAGTTGCCCCGAGAAGTAGATCCGAACGTCTAC
CATATGCTCCACGACGACGCAGGAGGGATCTCCTTCTCATCTATAGGCGG
CTTGAATGACCAGATCCGAGAGCTTCGCGAGGTCATCGAGTTGCCACTAA
CAAATCCCGAGCTTTTCAGCCGGGTTGGTATAAAGGCCCCCAAAGGCGTC
CTCCTCTACGGCCCTCCTGGCACAGGCAAGACGCTACTAGCCCGTGCATT
GGCCAGCAATATCCAAGCTACCTTTCTGAAGGTCCTGGCGTCAGCCATTG
TCGACAAGTACATTGGGGAGTCGGCCCGGGTTATTAGGGAAATGTTCGGA
TATGCGCGCGAGCATCAGCCCTGCGTGATCTTTATGGACGAAGTGGACGC
CATCGGGGGCTCGCGCTTTTCGGAAGGCACTTCGGCGGACCGCGAGATCC
AGCGCACGCTCATGGAGCTTTTGAATCAATTGGACGGCTTCGACGGACTT
GGGGCCGTGAAGATGGTCATGGCCACCAACAGGCCCGATATCCTCGACCC
CGCCCTCCTTCGACCCGGGCGTCTGGACCGGAAAATAGAGATCCCACTGC
CGAACGAGACCGGCCGTCTGGACGTGCTCAAGATCCACGCGGCGCCGATC
ACCAAGAGAGGTGACATCGACTTCGAGAGCATTGTCAAGCTCACAGACGG
CTTCAACTGTGCTGACTTGCGGAATGTGTGCACAGAAGCAGGCCTCTTCG
CGATCCGCGCAGGTCGGGACTACGTGCTGGAGGAGGACTTCATGAAGGCC
AGTCGGAAGCTTATGGATGCCAAAAAGCTTGAGGGAAAGCTCGAATACAG
CAAAGTGTAAAGGTACCTGCTTCGCGGCGATGACAAGTGCCCGTCATGAA
GAGTTCAAGTGCTGAAGACTGAGAGCTTGTAAACGACTGGCGTGAGCAAT
CGACGAAAGGCAGAAATTGACAAACATATTCTTTTCCACGTGTTTTTGCT
CTTGTCAAGTTTATTGCTTGCTTGGTGGAGCGATACAAGGAGGGATATTT
ATTCTTTTTTACTTCCAACAGCCCCCAGCAGTGTTTTAATTACTCAGAGA
GAATGGCTCTCGGCCACCACGCAAGACATCCTCTAGCTCCATTCCGGCCT
CTTCCACCAATTCATCGGCGATTTCATCCGCCAGCCTGATGTTGTGTGAC
AATACATGTGTTATTGATGAGGATCCCTTCCTAGCAACGAGGTTACTACT
AAAGGC
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protein sequence of rna9771

>rna9771-protein ID=rna9771-protein|Name=rna9771|organism=Nannochloropsis gaditana|type=polypeptide|length=313bp
MSLKATSSKPYVYSNPESSISMDDKRSLRHLPSKTRLIPSVKHTRPSISS
ATSHSSTRAPLSSPSFWGKRTKVSVRCSRSNVQDCEAGHEKDFSEVESQK
QREKVGRQCHMSYTRACSPFDLAVVERILKETSGEEIGPQKSELSDSKDR
CVEVLKDHQRKKAQTGNDYKSVPRHIRLRYLPTECRQASTCIGPVKRTQD
QAVVDMGTEMTHGIEGFEPTPCTDCKKEYCRPVCSPLLKLHQLSQVFAIR
QWRGREMPCPHSAQSWTSDCCDDSMEQVIKRLADEIADELVEEAGMELED
VLRGGREPFSLSN
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mRNA from alignment at KK037256.1:68317..69400-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9771 ID=rna9771|Name=rna9771|organism=Nannochloropsis gaditana|type=mRNA|length=1084bp|location=Sequence derived from alignment at KK037256.1:68317..69400- (Nannochloropsis gaditana)
ATGTCATTGAAAGCGACAAGCAGTAAACCTTACGTATACTCAAACCCCGA
ATCTTCAATATCTATGGATGACAAACGGAGCCTGCGCCATTTGCCGTCTA
AGACCAGGCTTATCCCCTCAGTCAAGCATACCCGCCCTAGCATTTCCTCC
GCCACGAGTCACTCATCAACCCGAGCACCTTTAAGCAGCCCTTCCTTTTG
GGGAAAAAGAACTAAGGTATCCGTTCGATGTTCGCGTTCAAATGTTCAAG
ATTGCGAGGCAGGGCATGAAAAAGATTTTTCAGAGGTTGAGAGCCAAAAA
CAGAGAGAGAAGGTAGGGCGCCAATGCCATATGTCTTACACGCGTGCTTG
CTCGCCTTTCGATTTAGCTGTAGTAGAAAGGATCTTGAAGGAAACAAGCG
GCGAAGAGATTGGCCCGCAGAAGAGTGAGCTATCAGACAGCAAAGACCGA
TGCGTGGAAGTCCTAAAAGATCACCAGCGGAAGAAAGCTCAAACGGGAAA
TGATTACAAGAGTGTTCCACGTCATATTCGGCTCCGATATCTTCCTACCG
AATGTCGGCAAGCGTCAACATGCATTGGCCCAGTCAAGCGAACTCAGGAC
CAGGCAGTCGTCGATATGGGAACTGAAATGACCCACGGAATAGAAGGGTT
TGAGCCGACGCCGTGTACCGACTGCAAAAAAGAATATTGTCGCCCGGTCT
GTTCACCGCTCCTCAAGCTCCATCAATTGTCGCAAGTCTTTGCAATCAGA
CAATGGCGTGGCAGAGAAATGCCGTGCCCTCACTCAGCTCAAAGTTGGAC
GAGCGATTGCTGCGACGATTCAATGGAGCAAGTCATCAAGCGGTAAGTAA
AAGTACATGTGCTGGTTTCTTAAAAAAATAGAGGCGGGCAAGATTTTGCT
GTGCTTAGCGAGAGCCTTTAGTAGTAACCTCGTTGCTAGGAAGGGATCCT
CATCAATAACACATGTATTGTCACACAACATCAGGCTGGCGGATGAAATC
GCCGATGAATTGGTGGAAGAGGCCGGAATGGAGCTAGAGGATGTCTTGCG
TGGTGGCCGAGAGCCATTCTCTCTGAGTAATTAA
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Coding sequence (CDS) from alignment at KK037256.1:68317..69400-

>rna9771 ID=rna9771|Name=rna9771|organism=Nannochloropsis gaditana|type=CDS|length=1884bp|location=Sequence derived from alignment at KK037256.1:68317..69400- (Nannochloropsis gaditana)
GCTGGCGGATGAAATCGCCGATGAATTGGTGGAAGAGGCCGGAATGGAGC
TAGAGGATGTCTTGCGTGGTGGCCGAGAGCCATTCTCTCTGAGTAATTAA
ATGTCATTGAAAGCGACAAGCAGTAAACCTTACGTATACTCAAACCCCGA
ATCTTCAATATCTATGGATGACAAACGGAGCCTGCGCCATTTGCCGTCTA
AGACCAGGCTTATCCCCTCAGTCAAGCATACCCGCCCTAGCATTTCCTCC
GCCACGAGTCACTCATCAACCCGAGCACCTTTAAGCAGCCCTTCCTTTTG
GGGAAAAAGAACTAAGGTATCCGTTCGATGTTCGCGTTCAAATGTTCAAG
ATTGCGAGGCAGGGCATGAAAAAGATTTTTCAGAGGTTGAGAGCCAAAAA
CAGAGAGAGAAGGTAGGGCGCCAATGCCATATGTCTTACACGCGTGCTTG
CTCGCCTTTCGATTTAGCTGTAGTAGAAAGGATCTTGAAGGAAACAAGCG
GCGAAGAGATTGGCCCGCAGAAGAGTGAGCTATCAGACAGCAAAGACCGA
TGCGTGGAAGTCCTAAAAGATCACCAGCGGAAGAAAGCTCAAACGGGAAA
TGATTACAAGAGTGTTCCACGTCATATTCGGCTCCGATATCTTCCTACCG
AATGTCGGCAAGCGTCAACATGCATTGGCCCAGTCAAGCGAACTCAGGAC
CAGGCAGTCGTCGATATGGGAACTGAAATGACCCACGGAATAGAAGGGTT
TGAGCCGACGCCGTGTACCGACTGCAAAAAAGAATATTGTCGCCCGGTCT
GTTCACCGCTCCTCAAGCTCCATCAATTGTCGCAAGTCTTTGCAATCAGA
CAATGGCGTGGCAGAGAAATGCCGTGCCCTCACTCAGCTCAAAGTTGGAC
GAGCGATTGCTGCGACGATTCAATGGAGCAAGTCATCAAGCGGCTGGCGG
ATGAAATCGCCGATGAATTGGTGGAAGAGGCCGGAATGGAGCTAGAGGAT
GTCTTGCGTGGTGGCCGAGAGCCATTCTCTCTGAGTAATTAAATGTCATT
GAAAGCGACAAGCAGTAAACCTTACGTATACTCAAACCCCGAATCTTCAA
TATCTATGGATGACAAACGGAGCCTGCGCCATTTGCCGTCTAAGACCAGG
CTTATCCCCTCAGTCAAGCATACCCGCCCTAGCATTTCCTCCGCCACGAG
TCACTCATCAACCCGAGCACCTTTAAGCAGCCCTTCCTTTTGGGGAAAAA
GAACTAAGGTATCCGTTCGATGTTCGCGTTCAAATGTTCAAGATTGCGAG
GCAGGGCATGAAAAAGATTTTTCAGAGGTTGAGAGCCAAAAACAGAGAGA
GAAGGTAGGGCGCCAATGCCATATGTCTTACACGCGTGCTTGCTCGCCTT
TCGATTTAGCTGTAGTAGAAAGGATCTTGAAGGAAACAAGCGGCGAAGAG
ATTGGCCCGCAGAAGAGTGAGCTATCAGACAGCAAAGACCGATGCGTGGA
AGTCCTAAAAGATCACCAGCGGAAGAAAGCTCAAACGGGAAATGATTACA
AGAGTGTTCCACGTCATATTCGGCTCCGATATCTTCCTACCGAATGTCGG
CAAGCGTCAACATGCATTGGCCCAGTCAAGCGAACTCAGGACCAGGCAGT
CGTCGATATGGGAACTGAAATGACCCACGGAATAGAAGGGTTTGAGCCGA
CGCCGTGTACCGACTGCAAAAAAGAATATTGTCGCCCGGTCTGTTCACCG
CTCCTCAAGCTCCATCAATTGTCGCAAGTCTTTGCAATCAGACAATGGCG
TGGCAGAGAAATGCCGTGCCCTCACTCAGCTCAAAGTTGGACGAGCGATT
GCTGCGACGATTCAATGGAGCAAGTCATCAAGCG
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Synonyms
Publications