EWM20927.1, cds9740 (CDS) Nannochloropsis gaditana

Overview
NameEWM20927.1
Unique Namecds9740
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:68559..69400 -
Alignment locationKK037256.1:68317..68416 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20927.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100061g23.8560.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:68559..69400 -
KK037256.1supercontigKK037256.1:68317..68416 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20927.1 vs. NCBI_GenBank
Match: gi|585100883|gb|EWM20927.1| (hypothetical protein Naga_100061g23 [Nannochloropsis gaditana])

HSP 1 Score: 646.351 bits (1666), Expect = 0.000e+0
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0 
Query:    1 MSLKATSSKPYVYSNPESSISMDDKRSLRHLPSKTRLIPSVKHTRPSISSATSHSSTRAPLSSPSFWGKRTKVSVRCSRSNVQDCEAGHEKDFSEVESQKQREKVGRQCHMSYTRACSPFDLAVVERILKETSGEEIGPQKSELSDSKDRCVEVLKDHQRKKAQTGNDYKSVPRHIRLRYLPTECRQASTCIGPVKRTQDQAVVDMGTEMTHGIEGFEPTPCTDCKKEYCRPVCSPLLKLHQLSQVFAIRQWRGREMPCPHSAQSWTSDCCDDSMEQVIKRLADEIADELVEEAGMELEDVLRGGREPFSLSN 313
            MSLKATSSKPYVYSNPESSISMDDKRSLRHLPSKTRLIPSVKHTRPSISSATSHSSTRAPLSSPSFWGKRTKVSVRCSRSNVQDCEAGHEKDFSEVESQKQREKVGRQCHMSYTRACSPFDLAVVERILKETSGEEIGPQKSELSDSKDRCVEVLKDHQRKKAQTGNDYKSVPRHIRLRYLPTECRQASTCIGPVKRTQDQAVVDMGTEMTHGIEGFEPTPCTDCKKEYCRPVCSPLLKLHQLSQVFAIRQWRGREMPCPHSAQSWTSDCCDDSMEQVIKRLADEIADELVEEAGMELEDVLRGGREPFSLSN
Sbjct:    1 MSLKATSSKPYVYSNPESSISMDDKRSLRHLPSKTRLIPSVKHTRPSISSATSHSSTRAPLSSPSFWGKRTKVSVRCSRSNVQDCEAGHEKDFSEVESQKQREKVGRQCHMSYTRACSPFDLAVVERILKETSGEEIGPQKSELSDSKDRCVEVLKDHQRKKAQTGNDYKSVPRHIRLRYLPTECRQASTCIGPVKRTQDQAVVDMGTEMTHGIEGFEPTPCTDCKKEYCRPVCSPLLKLHQLSQVFAIRQWRGREMPCPHSAQSWTSDCCDDSMEQVIKRLADEIADELVEEAGMELEDVLRGGREPFSLSN 313
The following BLAST results are available for this feature:
BLAST of EWM20927.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100883|gb|EWM20927.1|0.000e+0100.00hypothetical protein Naga_100061g23 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9771rna9771Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications