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Properties
| Property Name | Value |
|---|
| Product | cytochrome b-561 domain containing 1 |
| Orig transcript id | gnl|cribi|Naga_100061g28.8571.mrna |
| Orig protein id | gnl|cribi|Naga_100061g28.8571 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:59258..61490 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9766 ID=rna9766|Name=rna9766|organism=Nannochloropsis gaditana|type=mRNA|length=1473bp
CTCATCGACCTTCAACCAATCTTCTAGTAAATGCTTATGGCCAGCTTCTT
ATCGGGCATATTTACCGCGGGGCTCGCAGCGTTTCGGGGTGGCTCGGATG
CAATGCAAACGAGTACTAGCACCAAAGCAGAACAAACTGGGGAACAAGCT
GCCATTCTAAACTCGAATGAAGGCGACATCCTACGCAAATGCTGGAGACT
GGAGCAAGCCGGAAGAATTTCGGAGCTCTGTCGAGTGGAAGAGCCATTGC
CCGCCCCTGGCGCAGGCGAGGTCCGCGTCAAGGTATGCTGAGAAATGAAA
CCGCGCCGTCACTCGCATAGACGGTAACATAACATTGTATTGATGAAAAA
AAGCATTCGTTGTTACTTCCGCATAAGGTTAAGGCTATTGGACTCAACAT
GGCGGACATTTTCGCGATACTCGGGGTCCTTCATCCCAGGTCTTGAATAC
AGCGGCGTCGTGGACGCCCTAGGCCCTCCAGACACAACCTCCTCCCCCTT
CCCTTCCTCCACCATCAAGGCGGGGGACCCTGTTTACGGCTTCACGCGCT
TCGGCGCCTACGCCTCTCACCTGAATGTCCCCCTCGCCTACGTGCGGCCC
CTGCCTTCGTCCTTCTCGTTCGCGCAAGGCGCCGCCTTCATCGTCCAGGG
CCTGACTGCCTGGCACGCTATGATCGAGTTGGGAAATCTGAAGAAGGGGC
AGACGGTGCTGGTGCACTCAGCCGCGGGGGGCGTGGGCTGCTTCGCTCTT
GAGATCTGCGCAAAGTTCCAGGCATTTCCCATCGCCACCATCGGCTCCGA
GACCAAACGGGCGTTTCTGCAGTCAAGATTTGGCCTGAATGATGGTCAGA
TAGTGGTCAGGGAGAAGGAGGACAGGAAGTTTGCCCGGCAATTGAAGGAC
GCCGTGAGAGGGAAAAGCGGCCGGAATAGGGTAGGAGAAAGGGCACGGGG
ATCGCATGAAATGCAAGAAAAGGAGGACGGAGGCTTCGACCTGATATTGG
ATGCATTGGGGGGCATGTATTTCAAAGAGGGCTACAAGCAATTGGCGAGG
GGAGGGAGGATGATCACTTTTGGCGCCGCTGATTACTTGTCACCGACAGA
CGGACCAAATTGGTGGAAGATCATCCCACGGTATTTGACACGGCCGCGCT
TGGATCCGGGGGATATGTGTGCGGAGAATCGAGGCGTACTGGGCTTCAAT
CTGATCTGGCTTACAGACAAGGTCAAGGAGCTGAATGCGGAGCTTGACGA
CATGCTCAAGATCGATTGGAATCCTCCTCACGTAGGAGCCACATATCCAT
TTCATGAACTTCCCGATGCTGTCAGGGCGCTACAATCAGGACTGACAACG
GGAAAGGTTGTGGTCTTGCTAAGCGACGAAGAATGTGAGGGTCAGACCGC
CCTTAAAGCGTAGTAATATGCAAATCGGGACAACATATCTGCCAAAAAAA
TAATAAATCTGATGTCCCTTTTA back to topprotein sequence of rna9766 >rna9766-protein ID=rna9766-protein|Name=rna9766|organism=Nannochloropsis gaditana|type=polypeptide|length=331bp
MIVSNIYNRLKSLVRDSHCIPETPDGSGGGLLVEDDDNYRQRPFVKTLDN
VTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLF
SFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGF
HILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAG
LEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSL
GFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGG
CDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI back to topmRNA from alignment at KK037256.1:59258..61490- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9766 ID=rna9766|Name=rna9766|organism=Nannochloropsis gaditana|type=mRNA|length=2233bp|location=Sequence derived from alignment at KK037256.1:59258..61490- (Nannochloropsis gaditana)
CATGTTCGCTGCTTTCTGCATTTTATATGACGGGCTCGTCCGGCGTCGAG
CTCCCTTCACAAGGCTAGGTTCATGGGCAAGTGGGCACAAGATTCTAGGT
ATCTCGATCTTGGTGCCGATGTAAGCACTCACATCGTTTTTAAAGAATAT
GAGGCTGTTGGACACACTCAAACAATTTTGTCTTCCCTTTGCTTGAAAGT
CGTCCCCCGGCTGTTCAAACCTCGCAATATCACACGCTAACTATCAATAA
CACCCAATACCATGCCAGGGATTTGATGATTGTGTCAAACATCTACAATC
GCTTAAAGAGCCTTGTTCGGGACAGTCATTGCATCCCTGAGACGCCCGAT
GGAAGTGGCGGCGGTTTACTTGTCGAGGACGACGACAATTATCGACAGAG
GCCTTTTGTGAAAACCCTTGACAACGGTACAGTATACGTTTTCAACAGGC
ATGTGAACACTGAAATTGTGGGTGTAGTCATATTCTCAGGGAATCTTTCG
ATCTCGGGTAGAAAATTATTACGAGATACACAAGCGTGGGGACATTCGAG
TCTATGATGCAAGCACCGCAAAATTGCGTACATGTCTCCATTCTTGCTGT
TTGTTCCTTGTATAGAACCTTACCCCGCCTGACTTATCCGCTCTTCACCA
ATTTTACTGACGCAGTGACTGAATTACGTCGAAATTTTGTTGCCCGACTT
AAAATTCTCGACCCGCTGGTGGAGTCGAACCTGATTATCCATCTTTTCGC
CATCTCCCTCCTTCTATGGATCTGGGGCATCTCGCTGGCTCGCGCCCATA
CGCTTACCTTGTTTTCCTTCCATCCAGTCTTCATGTCAATGGGATGTGTT
CTATTCATGACCGAAGGCATTCTGGTAAGAGAAACCCAAGATGTTAAAAT
TAATAGAAATTTTCGACCACCAAGCAGGAAATACATTTTCATGAAATTGA
CGGAACAATCACTCAAAAGTATGTTTGTGTGCTCATGGCCCCTTTTGAAA
ATATTTTTAGGCCTATCGCAACCACGCATGCTTTCAATTTCTCTCACCAA
TTATGCGAAATTCTGCTCGCGTCAAGCTGCAAAATATTCACCGTGGATTT
CACATTTTAGCAGCCGTTTGCGTGGTTATGGGCATGGCATTTATTTTTAG
CAACAAAGGTAAAAATATCTCTTTTTTTAATGGTTTGTTTGACATTAGAG
CGAGTATGTAACTAACTTCGATGTCTCTGCATCTTTTCTTTCATGAAACA
ACTTCTCACTTCATTCATTATTTATTCATCTCCGGAATTTATTCGTTCAC
TAGTCAAGAAGCACCGCACAATTTTGCCCACGTCTATTCACGCCGCCCTT
GGCTTCCTTGTTTGCGCACTTATGGTCTTACAAATGATTGCGGGTCTTGA
AAAGCTGGATGCCCAACGCTCTGGAGTTATTGGGGGGAATGGACGAGATG
GGGGAGGAGTTCTGTATCGATGGCATGGAAAGGCGGGTCTCATACTGTAT
GACGTGGCTATGGCGACAGTGGCAACAGGACTCGTTAAGAGCCTTGGTTT
CGGATTAATTACCTTTCTTATGGTGCTTCATGTTTGCTTGGTCTGGTTCA
TGGTGCATCTGCAAATGGGAAGCAAACCTTTCAGACCGACTGAAGATGGA
GGTTTAACCGATAGAGAATTGATAGAATTACGGAGGGAGGGAGGATGTGA
TGGGGGTGATGAGAAAGGCGAGAAAGGGAGAGGATCGAAAGGTAATTTTG
TGCCAAGAAAAGATAGCGGGGATTTCACGGATCCAATATAATCTGAGGAG
AAATCAAATGTATGAGTATTCGCTACGAGACGAAAAAAAAGAGACACAAT
CATATTTATTGCATCACGAGGTAAATGCGTCCTGCTAGAATTAAGTCTAA
TCGTTAGCATAGATATTGCCTTCTACATCTTTCAGGTACATGTTAATACT
GATTTGACGATGAGGTCTGCATCTGCTAAGTGAAAGAAATAGGTCAATTG
ACTTCGTGATTATGTGATATCATAAGCCATTCTCTTTGTACCCATGAACG
TCCTACCCTGTCGTCACATTTTGCAGACTGCCTTTTTAATTCTTTGCTAG
CTCCATTGGACAGTAATGATGGCTTAAGGCTCCAACATGCTATAATCTTG
CACTATGGTATAAGAAAATACAAACAACCAATATATTCTGTTCAGAATTC
TCGTTGCTTTGGATTTTAGCAGATCACATGAAA back to topCoding sequence (CDS) from alignment at KK037256.1:59258..61490- >rna9766 ID=rna9766|Name=rna9766|organism=Nannochloropsis gaditana|type=CDS|length=3984bp|location=Sequence derived from alignment at KK037256.1:59258..61490- (Nannochloropsis gaditana)
TCAAGAAGCACCGCACAATTTTGCCCACGTCTATTCACGCCGCCCTTGGC
TTCCTTGTTTGCGCACTTATGGTCTTACAAATGATTGCGGGTCTTGAAAA
GCTGGATGCCCAACGCTCTGGAGTTATTGGGGGGAATGGACGAGATGGGG
GAGGAGTTCTGTATCGATGGCATGGAAAGGCGGGTCTCATACTGTATGAC
GTGGCTATGGCGACAGTGGCAACAGGACTCGTTAAGAGCCTTGGTTTCGG
ATTAATTACCTTTCTTATGGTGCTTCATGTTTGCTTGGTCTGGTTCATGG
TGCATCTGCAAATGGGAAGCAAACCTTTCAGACCGACTGAAGATGGAGGT
TTAACCGATAGAGAATTGATAGAATTACGGAGGGAGGGAGGATGTGATGG
GGGTGATGAGAAAGGCGAGAAAGGGAGAGGATCGAAAGGTAATTTTGTGC
CAAGAAAAGATAGCGGGGATTTCACGGATCCAATATAAGCCTATCGCAAC
CACGCATGCTTTCAATTTCTCTCACCAATTATGCGAAATTCTGCTCGCGT
CAAGCTGCAAAATATTCACCGTGGATTTCACATTTTAGCAGCCGTTTGCG
TGGTTATGGGCATGGCATTTATTTTTAGCAACAAAGTGACTGAATTACGT
CGAAATTTTGTTGCCCGACTTAAAATTCTCGACCCGCTGGTGGAGTCGAA
CCTGATTATCCATCTTTTCGCCATCTCCCTCCTTCTATGGATCTGGGGCA
TCTCGCTGGCTCGCGCCCATACGCTTACCTTGTTTTCCTTCCATCCAGTC
TTCATGTCAATGGGATGTGTTCTATTCATGACCGAAGGCATTCTGATGAT
TGTGTCAAACATCTACAATCGCTTAAAGAGCCTTGTTCGGGACAGTCATT
GCATCCCTGAGACGCCCGATGGAAGTGGCGGCGGTTTACTTGTCGAGGAC
GACGACAATTATCGACAGAGGCCTTTTGTGAAAACCCTTGACAACGTCAA
GAAGCACCGCACAATTTTGCCCACGTCTATTCACGCCGCCCTTGGCTTCC
TTGTTTGCGCACTTATGGTCTTACAAATGATTGCGGGTCTTGAAAAGCTG
GATGCCCAACGCTCTGGAGTTATTGGGGGGAATGGACGAGATGGGGGAGG
AGTTCTGTATCGATGGCATGGAAAGGCGGGTCTCATACTGTATGACGTGG
CTATGGCGACAGTGGCAACAGGACTCGTTAAGAGCCTTGGTTTCGGATTA
ATTACCTTTCTTATGGTGCTTCATGTTTGCTTGGTCTGGTTCATGGTGCA
TCTGCAAATGGGAAGCAAACCTTTCAGACCGACTGAAGATGGAGGTTTAA
CCGATAGAGAATTGATAGAATTACGGAGGGAGGGAGGATGTGATGGGGGT
GATGAGAAAGGCGAGAAAGGGAGAGGATCGAAAGGTAATTTTGTGCCAAG
AAAAGATAGCGGGGATTTCACGGATCCAATATAAGCCTATCGCAACCACG
CATGCTTTCAATTTCTCTCACCAATTATGCGAAATTCTGCTCGCGTCAAG
CTGCAAAATATTCACCGTGGATTTCACATTTTAGCAGCCGTTTGCGTGGT
TATGGGCATGGCATTTATTTTTAGCAACAAAGTGACTGAATTACGTCGAA
ATTTTGTTGCCCGACTTAAAATTCTCGACCCGCTGGTGGAGTCGAACCTG
ATTATCCATCTTTTCGCCATCTCCCTCCTTCTATGGATCTGGGGCATCTC
GCTGGCTCGCGCCCATACGCTTACCTTGTTTTCCTTCCATCCAGTCTTCA
TGTCAATGGGATGTGTTCTATTCATGACCGAAGGCATTCTGATGATTGTG
TCAAACATCTACAATCGCTTAAAGAGCCTTGTTCGGGACAGTCATTGCAT
CCCTGAGACGCCCGATGGAAGTGGCGGCGGTTTACTTGTCGAGGACGACG
ACAATTATCGACAGAGGCCTTTTGTGAAAACCCTTGACAACGTCAAGAAG
CACCGCACAATTTTGCCCACGTCTATTCACGCCGCCCTTGGCTTCCTTGT
TTGCGCACTTATGGTCTTACAAATGATTGCGGGTCTTGAAAAGCTGGATG
CCCAACGCTCTGGAGTTATTGGGGGGAATGGACGAGATGGGGGAGGAGTT
CTGTATCGATGGCATGGAAAGGCGGGTCTCATACTGTATGACGTGGCTAT
GGCGACAGTGGCAACAGGACTCGTTAAGAGCCTTGGTTTCGGATTAATTA
CCTTTCTTATGGTGCTTCATGTTTGCTTGGTCTGGTTCATGGTGCATCTG
CAAATGGGAAGCAAACCTTTCAGACCGACTGAAGATGGAGGTTTAACCGA
TAGAGAATTGATAGAATTACGGAGGGAGGGAGGATGTGATGGGGGTGATG
AGAAAGGCGAGAAAGGGAGAGGATCGAAAGGTAATTTTGTGCCAAGAAAA
GATAGCGGGGATTTCACGGATCCAATATAAGCCTATCGCAACCACGCATG
CTTTCAATTTCTCTCACCAATTATGCGAAATTCTGCTCGCGTCAAGCTGC
AAAATATTCACCGTGGATTTCACATTTTAGCAGCCGTTTGCGTGGTTATG
GGCATGGCATTTATTTTTAGCAACAAAGTGACTGAATTACGTCGAAATTT
TGTTGCCCGACTTAAAATTCTCGACCCGCTGGTGGAGTCGAACCTGATTA
TCCATCTTTTCGCCATCTCCCTCCTTCTATGGATCTGGGGCATCTCGCTG
GCTCGCGCCCATACGCTTACCTTGTTTTCCTTCCATCCAGTCTTCATGTC
AATGGGATGTGTTCTATTCATGACCGAAGGCATTCTGATGATTGTGTCAA
ACATCTACAATCGCTTAAAGAGCCTTGTTCGGGACAGTCATTGCATCCCT
GAGACGCCCGATGGAAGTGGCGGCGGTTTACTTGTCGAGGACGACGACAA
TTATCGACAGAGGCCTTTTGTGAAAACCCTTGACAACGTCAAGAAGCACC
GCACAATTTTGCCCACGTCTATTCACGCCGCCCTTGGCTTCCTTGTTTGC
GCACTTATGGTCTTACAAATGATTGCGGGTCTTGAAAAGCTGGATGCCCA
ACGCTCTGGAGTTATTGGGGGGAATGGACGAGATGGGGGAGGAGTTCTGT
ATCGATGGCATGGAAAGGCGGGTCTCATACTGTATGACGTGGCTATGGCG
ACAGTGGCAACAGGACTCGTTAAGAGCCTTGGTTTCGGATTAATTACCTT
TCTTATGGTGCTTCATGTTTGCTTGGTCTGGTTCATGGTGCATCTGCAAA
TGGGAAGCAAACCTTTCAGACCGACTGAAGATGGAGGTTTAACCGATAGA
GAATTGATAGAATTACGGAGGGAGGGAGGATGTGATGGGGGTGATGAGAA
AGGCGAGAAAGGGAGAGGATCGAAAGGTAATTTTGTGCCAAGAAAAGATA
GCGGGGATTTCACGGATCCAATATAAGCCTATCGCAACCACGCATGCTTT
CAATTTCTCTCACCAATTATGCGAAATTCTGCTCGCGTCAAGCTGCAAAA
TATTCACCGTGGATTTCACATTTTAGCAGCCGTTTGCGTGGTTATGGGCA
TGGCATTTATTTTTAGCAACAAAGTGACTGAATTACGTCGAAATTTTGTT
GCCCGACTTAAAATTCTCGACCCGCTGGTGGAGTCGAACCTGATTATCCA
TCTTTTCGCCATCTCCCTCCTTCTATGGATCTGGGGCATCTCGCTGGCTC
GCGCCCATACGCTTACCTTGTTTTCCTTCCATCCAGTCTTCATGTCAATG
GGATGTGTTCTATTCATGACCGAAGGCATTCTGATGATTGTGTCAAACAT
CTACAATCGCTTAAAGAGCCTTGTTCGGGACAGTCATTGCATCCCTGAGA
CGCCCGATGGAAGTGGCGGCGGTTTACTTGTCGAGGACGACGACAATTAT
CGACAGAGGCCTTTTGTGAAAACCCTTGACAACG back to top
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