EWM20938.1, cds9735 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20938.1 vs. NCBI_GenBank
Match: gi|585100894|gb|EWM20938.1| (cytochrome b-561 domain containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0 Query: 1 MIVSNIYNRLKSLVRDSHCIPETPDGSGGGLLVEDDDNYRQRPFVKTLDNVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI 331 MIVSNIYNRLKSLVRDSHCIPETPDGSGGGLLVEDDDNYRQRPFVKTLDNVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI Sbjct: 1 MIVSNIYNRLKSLVRDSHCIPETPDGSGGGLLVEDDDNYRQRPFVKTLDNVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI 331
BLAST of EWM20938.1 vs. NCBI_GenBank
Match: gi|585100895|gb|EWM20939.1| (cytochrome b-561 domain containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0 Identity = 286/299 (95.65%), Postives = 286/299 (95.65%), Query Frame = 0 Query: 39 YRQRP------FVKTLDNVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI 331 YR P F D VTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI Sbjct: 20 YRTLPRLTYPLFTNFTDAVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPFRPTEDGGLTDRELIELRREGGCDGGDEKGEKGRGSKGNFVPRKDSGDFTDPI 318
BLAST of EWM20938.1 vs. NCBI_GenBank
Match: gi|299117222|emb|CBN75184.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 139.043 bits (349), Expect = 2.431e-35 Identity = 88/270 (32.59%), Postives = 132/270 (48.89%), Query Frame = 0 Query: 48 LDNVTELRRNFVARLKILDPLVESNLIIHLFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGFGLITFLMVLHVCLVWFMVHLQMGSKPF-------RPTEDGG---LTDRELIELRREGGCDGGDEK 307 LD +T R VA K V+ + H+ + L + + ++ +L LFS H M++ V+ M EG++AYRNH LSPIM N + K + IH +LA++ +G+ FI NKV +ILP + H +G + MV+Q++ G K + SGVI R G YRWHGK GL+LYD++ +V GL G ++ ++ L + W V+LQM T+D LT E +L EG + E+ Sbjct: 12 LDKITTARARVVAASKS-PAWVKPRFLTHIMGPVIALIVIASTFSKTESLNLFSLHATCMALAFVVLMPEGVVAYRNHLLLDSLSPIMSNGTKAKKRTIHLTLQVLASMFAALGLFFIAGNKVYHRNSILPRTWHGVVGAITLLAMVMQVVVGRLKHMSFTSGVIDARNR---GKKYRWHGKMGLLLYDLSTVSVVLGLWTFFGLSVVAVVVPLMLAYAWLNVNLQMHETKHITVPVYSEGTDDPAGEKLTAPETKQLEEEGVPESKGER 277
BLAST of EWM20938.1 vs. NCBI_GenBank
Match: gi|302834563|ref|XP_002948844.1| (hypothetical protein VOLCADRAFT_116942 [Volvox carteri f. nagariensis] >gi|300266035|gb|EFJ50224.1| hypothetical protein VOLCADRAFT_116942 [Volvox carteri f. nagariensis]) HSP 1 Score: 63.929 bits (154), Expect = 7.236e-8 Identity = 55/163 (33.74%), Postives = 82/163 (50.31%), Query Frame = 0 Query: 96 TLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPT------SIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKSLGF 252 T LF++HPV M++G V+FM E +L+Y+ +PI+ R + IH G H+ A VCV +G F ++ HR LP S H+ LG AL+ LQ++ GL R G+ + R G L+R+ G + A+ VATGL + + F Sbjct: 67 TSKLFNWHPVLMTLGFVVFMAEALLSYQ--------APIIPGLPREVRKRIHLGCHLAATVCVFLG----FVAVLQSHRLKLPDPMPDWYSPHSFLGLTAIALVGLQVLVGLYSYVWPRLGL---SHRMALGPLHRF---WGAAAWLAALGAVATGLQEKVTF 211
BLAST of EWM20938.1 vs. NCBI_GenBank
Match: gi|953453187|ref|XP_014570146.1| (hypothetical protein L969DRAFT_81397 [Mixia osmundae IAM 14324] >gi|358058693|dbj|GAA95656.1| hypothetical protein E5Q_02312 [Mixia osmundae IAM 14324] >gi|658166845|gb|KEI41555.1| hypothetical protein L969DRAFT_81397 [Mixia osmundae IAM 14324]) HSP 1 Score: 62.3882 bits (150), Expect = 1.660e-7 Identity = 64/238 (26.89%), Postives = 97/238 (40.76%), Query Frame = 0 Query: 24 PDGSGGGLLVEDDDNYRQRPFV---KTLDNV---TELRRNFVARLKILDPLVESNLIIH------LFAISLLLWIWGISLARAHTLTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLVKS 249 PD S DN RP + T DN + + + +L+ L + + LFAI+ W+ I H LFS+HP S+ V F GIL L P A+ K QN+H+ F LA V ++ G+A I NK K H + H LG +L+V Q I GL + ++GG + +++H G L+ + + T T + + Sbjct: 6 PDASVRSPSSAQSDNGEDRPLLGNSTTADNPDLEESMAKAQASYASLLNNLANRTMALAAQVGVILFAITT--WVMLIE----HPAGLFSYHPALQSLAIVFF-GYGILV---------LQPTKSPQAKRKGQNVHQIFQGLALVSILGGVAIIIFNK-KLHEAAHFATWHGILGITTVSLLVFQAIVGLLQAYPAGQKLLGGEAK--AKATWKYHRALGYTLFILLILTPMTAVTSA 224
BLAST of EWM20938.1 vs. NCBI_GenBank
Match: gi|813158013|ref|XP_012202355.1| (hypothetical protein SPRG_07687 [Saprolegnia parasitica CBS 223.65] >gi|641532967|gb|KDO26974.1| hypothetical protein SPRG_07687 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 62.3882 bits (150), Expect = 1.675e-7 Identity = 43/151 (28.48%), Postives = 71/151 (47.02%), Query Frame = 0 Query: 97 LTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLV 247 + L H + M++G V F +E +L YR SP + R++ +NIH+ H ++G+A I ++ + + P + H +GF+ ALM+LQM G KL + GR ++ WHG G + Y +A+ GL Sbjct: 91 VNLLFVHILMMTLGWVAFSSEAMLVYRPFDGLNARSP----NKRIQ-RNIHKFMHYAVLATTLLGLAGILISRGMAGKRLFPHNKHGWMGFITVALMLLQMEVGRRKLK-----FLQFQGR----TIFEWHGMVGKLTYASGIASTILGLT 227
BLAST of EWM20938.1 vs. NCBI_GenBank
Match: gi|669169219|ref|XP_008619958.1| (hypothetical protein SDRG_15560 [Saprolegnia diclina VS20] >gi|530728378|gb|EQC26620.1| hypothetical protein SDRG_15560 [Saprolegnia diclina VS20]) HSP 1 Score: 62.003 bits (149), Expect = 1.965e-7 Identity = 43/151 (28.48%), Postives = 71/151 (47.02%), Query Frame = 0 Query: 97 LTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLV 247 + L H + M++G V F +E +L YR SP + R++ +NIH+ H ++G+A I ++ + + P + H +GF+ ALM+LQM G KL + GR ++ WHG G + Y +A+ GL Sbjct: 91 VNLLFVHILMMTLGWVAFSSEAMLVYRPFDGLNARSP----NKRIQ-RNIHKFMHYAVLATTLLGLAGILISRGMAGKRLFPHNKHGWMGFITVALMLLQMEVGRRKLK-----FLQFQGR----TIFEWHGFVGKLTYASGIASTILGLT 227
BLAST of EWM20938.1 vs. NCBI_GenBank
Match: gi|669169223|ref|XP_008619960.1| (hypothetical protein SDRG_15562 [Saprolegnia diclina VS20] >gi|530728380|gb|EQC26622.1| hypothetical protein SDRG_15562 [Saprolegnia diclina VS20]) HSP 1 Score: 61.6178 bits (148), Expect = 2.461e-7 Identity = 43/151 (28.48%), Postives = 71/151 (47.02%), Query Frame = 0 Query: 97 LTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGLV 247 + L H + M++G V F +E +L YR SP + R++ +NIH+ H ++G+A I ++ + + P + H +GF+ ALM+LQM G KL + GR ++ WHG G + Y +A+ GL Sbjct: 91 VNLLFVHILMMTLGWVAFSSEAMLVYRPFDGLNARSP----NKRIQ-RNIHKFMHYAVLATTLLGLAGILISRGMAGKRLFPHNKHGWMGFITVALMLLQMEVGRRKLK-----FLQFQGR----TIFEWHGFVGKLTYASGIASTILGLT 227
BLAST of EWM20938.1 vs. NCBI_GenBank
Match: gi|1173927838|gb|OQR81641.1| (hypothetical protein THRCLA_23332 [Thraustotheca clavata]) HSP 1 Score: 61.6178 bits (148), Expect = 2.555e-7 Identity = 41/150 (27.33%), Postives = 69/150 (46.00%), Query Frame = 0 Query: 97 LTLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILPTSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGVLYRWHGKAGLILYDVAMATVATGL 246 L L+ H + M++ V F +E +L YR SP + R++ +NIH+ C ++G+A I ++ + + P + H +GF+ LM+LQM G KL + + G +Y WH G + Y +A+ GL Sbjct: 81 LNLYFVHILLMTVAWVAFSSEALLVYRPFDGLNTRSP----NRRIQ-RNIHKIMLYSVGACTLLGLAAILFSRAMAGKRLFPHNWHGWMGFITIGLMLLQMEIGRRKLK---------HLQFQGRTIYEWHAVVGKLTYASGIASTLFGL 216
BLAST of EWM20938.1 vs. NCBI_GenBank
Match: gi|1108934812|ref|XP_010736985.2| (PREDICTED: cytochrome b561 domain-containing protein 2 [Larimichthys crocea] >gi|808878387|gb|KKF26639.1| Cytochrome b561 domain-containing protein 2 [Larimichthys crocea]) HSP 1 Score: 60.4622 bits (145), Expect = 4.637e-7 Identity = 49/142 (34.51%), Postives = 67/142 (47.18%), Query Frame = 0 Query: 98 TLFSFHPVFMSMGCVLFMTEGILAYRNHACFQFLSPIMRNSARVKLQNIHRGFHILAAVCVVMGMAFIFSNKVKKHRTILP--TSIHAALGFLVCALMVLQMIAGLEKLDAQRSGVIGGNGRDGGGV--LYRWHGKAGLILY 235 +LFS+HP M++ LFMTE IL + H SPI R + K +H L C V+G+A IF N KH P TS H LG L ++VLQ +A + +I + G + L R+H GL+ Y Sbjct: 45 SLFSWHPFLMTLAFSLFMTEAILLFSPHG-----SPIKRFPHKTK-GRVHWILQCLCVSCAVLGLAAIFYN---KHLNGKPHFTSWHGLLGLLTVCVVVLQSLAAVP--------LIYHSLAKGWSLAKLKRYHAATGLVTY 169 The following BLAST results are available for this feature:
BLAST of EWM20938.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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