rna9752, rna9752 (mRNA) Nannochloropsis gaditana

Overview
Namerna9752
Unique Namerna9752
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length348
Alignment locationKK037256.1:28835..29142 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100455g6.3252.mrna
Orig protein idgnl|cribi|Naga_100455g6.3252
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:28835..29142 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100455g6gene9472Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9752rna9752-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20952.1cds9721Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9752 ID=rna9752|Name=rna9752|organism=Nannochloropsis gaditana|type=mRNA|length=348bp
ATGATTACCCTAACCCTAACCCGAACAGAAGAAAGCCGCGCGACCAAGTG
GCAAGGTCAATGGGGACAACGAAAAGTTGGGGGGAATTCTCGAGCATCTG
GTGGTCGTGACATCATTTTTTTCGTTGGTCCTTTTCGATCCGAGGGCTTC
TCAGTCAGTGTGCGCAAAGGAATTAGAGAAACGCGCTGCACGAGAGACAG
TATGACGAAGAGCTCTTTATTTGCAACACATAATGTGTCCAATAAAGCCC
TACTGCGAGTACGTCCTAAGCCTCGTTCCACTTTCATGCAAAAAATTCGC
AAGTCCGGGAGGGTTTTGACGCCCTTTTTCATGAGACTACGACGCTAA
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protein sequence of rna9752

>rna9752-protein ID=rna9752-protein|Name=rna9752|organism=Nannochloropsis gaditana|type=polypeptide|length=76bp
MSDDVRVRKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALER
MGRVEEALDLCREVASRQPRDETTME
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mRNA from alignment at KK037256.1:28835..29142-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9752 ID=rna9752|Name=rna9752|organism=Nannochloropsis gaditana|type=mRNA|length=308bp|location=Sequence derived from alignment at KK037256.1:28835..29142- (Nannochloropsis gaditana)
ATGTCAGATGATGTCCGAGTCCGCAAGCTCCAGCCTATCTACAATGCGCT
TGATGCGCGGAATTACAAGATGGCCATCAAACTCTGCGGTAAAAAAGACA
TGGAGCGATGGGACATCGTCAAAACCCTCAAAGCTCATGCCTTGGAGAGG
ATGGGAAGGGTCGAAGAGGCGCTGGACCTTTGTCGGGAGGTGGCGTCGCG
GCAGCCGAGGGATGAGACGGTGAGTGGGGGGGGGGGGGCGGGGGGAGGAG
GAGACTCGTTGTGGGGGCAAGTAGATGCCGTCATCATGATGGATAGACTA
TGGAGTGA
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Coding sequence (CDS) from alignment at KK037256.1:28835..29142-

>rna9752 ID=rna9752|Name=rna9752|organism=Nannochloropsis gaditana|type=CDS|length=462bp|location=Sequence derived from alignment at KK037256.1:28835..29142- (Nannochloropsis gaditana)
ACTATGGAGTGAATGTCAGATGATGTCCGAGTCCGCAAGCTCCAGCCTAT
CTACAATGCGCTTGATGCGCGGAATTACAAGATGGCCATCAAACTCTGCG
GTAAAAAAGACATGGAGCGATGGGACATCGTCAAAACCCTCAAAGCTCAT
GCCTTGGAGAGGATGGGAAGGGTCGAAGAGGCGCTGGACCTTTGTCGGGA
GGTGGCGTCGCGGCAGCCGAGGGATGAGACGACTATGGAGTGAATGTCAG
ATGATGTCCGAGTCCGCAAGCTCCAGCCTATCTACAATGCGCTTGATGCG
CGGAATTACAAGATGGCCATCAAACTCTGCGGTAAAAAAGACATGGAGCG
ATGGGACATCGTCAAAACCCTCAAAGCTCATGCCTTGGAGAGGATGGGAA
GGGTCGAAGAGGCGCTGGACCTTTGTCGGGAGGTGGCGTCGCGGCAGCCG
AGGGATGAGACG
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Synonyms
Publications