EWM20952.1, cds9721 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20952.1 vs. NCBI_GenBank
Match: gi|585100910|gb|EWM20952.1| (hypothetical protein Naga_100455g6 [Nannochloropsis gaditana]) HSP 1 Score: 156.762 bits (395), Expect = 1.405e-48 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 Query: 1 MSDDVRVRKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTME 76 MSDDVRVRKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTME Sbjct: 1 MSDDVRVRKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTME 76
BLAST of EWM20952.1 vs. NCBI_GenBank
Match: gi|695432195|ref|XP_009530872.1| (hypothetical protein PHYSODRAFT_514094 [Phytophthora sojae] >gi|348673624|gb|EGZ13443.1| hypothetical protein PHYSODRAFT_514094 [Phytophthora sojae]) HSP 1 Score: 87.8113 bits (216), Expect = 1.258e-18 Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 0 Query: 8 RKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTM 75 R ++PIY A+DAR YK AIKLC K + + DIV+ LKAH LER GRV+EALD+CR V +QP DET + Sbjct: 3 RYVRPIYEAIDARQYKNAIKLCAHKRVAQLDIVQVLKAHCLERTGRVDEALDICRRVQLKQPTDETLL 70
BLAST of EWM20952.1 vs. NCBI_GenBank
Match: gi|970629543|gb|KUF76778.1| (N-alpha-acetyltransferase 25 [Phytophthora nicotianae] >gi|970657933|gb|KUF95757.1| hypothetical protein AM588_10006847 [Phytophthora nicotianae]) HSP 1 Score: 86.6557 bits (213), Expect = 3.601e-18 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 1 MSDDVRV--RKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTM 75 MSD+ R+ R ++PIY A+D R YK AIKLC + + DIV+ LKAH LER GRVEEALD+CR + ++P DET + Sbjct: 1 MSDEARLMARFVRPIYEAIDNRQYKNAIKLCAHRRVAHLDIVQVLKAHCLERTGRVEEALDICRRIQLKRPTDETLL 77
BLAST of EWM20952.1 vs. NCBI_GenBank
Match: gi|566015131|gb|ETI38042.1| (hypothetical protein F443_16137 [Phytophthora parasitica P1569]) HSP 1 Score: 86.6557 bits (213), Expect = 3.672e-18 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 1 MSDDVRV--RKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTM 75 MSD+ R+ R ++PIY A+D R YK AIKLC + + DIV+ LKAH LER GRVEEALD+CR + ++P DET + Sbjct: 1 MSDEARLMARFVRPIYEAIDNRQYKNAIKLCAHRRVAHLDIVQVLKAHCLERTGRVEEALDICRRIQLKRPTDETLL 77
BLAST of EWM20952.1 vs. NCBI_GenBank
Match: gi|675204693|ref|XP_008911231.1| (hypothetical protein PPTG_15689 [Phytophthora parasitica INRA-310] >gi|567981248|gb|ETL31691.1| hypothetical protein L916_15578 [Phytophthora parasitica] >gi|568010738|gb|ETL84921.1| hypothetical protein L917_15401 [Phytophthora parasitica] >gi|568040618|gb|ETM38066.1| hypothetical protein L914_15535 [Phytophthora parasitica] >gi|568088601|gb|ETN03458.1| hypothetical protein PPTG_15689 [Phytophthora parasitica INRA-310] >gi|570318863|gb|ETO66811.1| hypothetical protein F444_16122 [Phytophthora parasitica P1976]) HSP 1 Score: 86.6557 bits (213), Expect = 3.744e-18 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 1 MSDDVRV--RKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTM 75 MSD+ R+ R ++PIY A+D R YK AIKLC + + DIV+ LKAH LER GRVEEALD+CR + ++P DET + Sbjct: 1 MSDEARLMARFVRPIYEAIDNRQYKNAIKLCAHRRVAHLDIVQVLKAHCLERTGRVEEALDICRRIQLKRPTDETLL 77
BLAST of EWM20952.1 vs. NCBI_GenBank
Match: gi|567952584|gb|ETK78256.1| (hypothetical protein L915_15683 [Phytophthora parasitica]) HSP 1 Score: 86.6557 bits (213), Expect = 3.781e-18 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 1 MSDDVRV--RKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTM 75 MSD+ R+ R ++PIY A+D R YK AIKLC + + DIV+ LKAH LER GRVEEALD+CR + ++P DET + Sbjct: 1 MSDEARLMARFVRPIYEAIDNRQYKNAIKLCAHRRVAHLDIVQVLKAHCLERTGRVEEALDICRRIQLKRPTDETLL 77
BLAST of EWM20952.1 vs. NCBI_GenBank
Match: gi|570942674|gb|ETP07931.1| (hypothetical protein F441_15965 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 86.2705 bits (212), Expect = 4.352e-18 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 1 MSDDVRV--RKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTM 75 MSD+ R+ R ++PIY A+D R YK AIKLC + + DIV+ LKAH LER GRVEEALD+CR + ++P DET + Sbjct: 1 MSDEARLMARFVRPIYEAIDNRQYKNAIKLCAHRRVAHLDIVQVLKAHCLERTGRVEEALDICRRIQLKRPTDETLL 77
BLAST of EWM20952.1 vs. NCBI_GenBank
Match: gi|570973295|gb|ETP35962.1| (hypothetical protein F442_15990 [Phytophthora parasitica P10297]) HSP 1 Score: 86.2705 bits (212), Expect = 5.100e-18 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0 Query: 1 MSDDVRV--RKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTM 75 MSD+ R+ R ++PIY A+D R YK AIKLC + + DIV+ LKAH LER GRVEEALD+CR + ++P DET + Sbjct: 1 MSDEARLMARFVRPIYEAIDNRQYKNAIKLCAHRRVAHLDIVQVLKAHCLERTGRVEEALDICRRIQLKRPTDETLL 77
BLAST of EWM20952.1 vs. NCBI_GenBank
Match: gi|953501426|emb|CEG37427.1| (Mitochondrial inheritance and actin cytoskeleton organization protein [Plasmopara halstedii]) HSP 1 Score: 84.3445 bits (207), Expect = 2.405e-17 Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 0 Query: 1 MSDD--VRVRKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTM 75 MSD+ + R ++PIY A+D YK AIKLC K + DIV+ LKAH+LER GRVEEAL++CR + +QP DET + Sbjct: 1 MSDNAWLMARYVRPIYQAIDDHQYKNAIKLCSHKRVAHLDIVQVLKAHSLERTGRVEEALNICRYLQLKQPTDETLL 77
BLAST of EWM20952.1 vs. NCBI_GenBank
Match: gi|1214693084|gb|OWZ07511.1| (hypothetical protein PHMEG_00020085, partial [Phytophthora megakarya]) HSP 1 Score: 82.0333 bits (201), Expect = 5.373e-17 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 0 Query: 4 DVRVRKLQPIYNALDARNYKMAIKLCGKKDMERWDIVKTLKAHALERMGRVEEALDLCREVASRQPRDETTM 75 DV R ++PIY A+D R YK AIKLC K + DIV+ LKAH ER GRV+EALD+CR + ++P D+T + Sbjct: 3 DVLSRYVRPIYEAIDNRQYKNAIKLCAHKRVAHLDIVQVLKAHCFERTGRVDEALDICRRIQLKRPTDDTLL 74 The following BLAST results are available for this feature:
BLAST of EWM20952.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|