rna9748, rna9748 (mRNA) Nannochloropsis gaditana

Overview
Namerna9748
Unique Namerna9748
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length762
Alignment locationKK037256.1:13756..14693 -

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Properties
Property NameValue
Productkh domain containing protein
Orig transcript idgnl|cribi|Naga_100968g2.5827.mrna
Orig protein idgnl|cribi|Naga_100968g2.5827
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:13756..14693 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100968g2gene9468Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20955.1cds9717Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9748rna9748-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9748 ID=rna9748|Name=rna9748|organism=Nannochloropsis gaditana|type=mRNA|length=762bp
ATGTGGCTCGCCCGTCCGCCCTCCCTCCTCCTCCTCCTCCTCTCCCTCCT
CTCCTCCGCCATGCGCGCCTCCCGGGCAGCTGTCGCCCTCGCCACGTCAG
CTGCCATGGCCCGCGCCCATTTGAACGCCTCCGTACCATCCCCTGCCATT
CCCTCCTCCTCACCCGCCCCCGAAGAAGGGAAGGAAGGAGAGAAGGAGGG
AAGGAAGGAGGGAGGGAAGGAGGGCAAGCTTCGGGGGCGAGCGGCTGTGG
TGGCGAAAGCAGGGGAGGGAGTGCGCTTCCTCCTCCTGCAAGAGACGATC
ATCTGCAAGTGCTTGCTACGCGTGGCCGTCACCCTAAGCGGGGGAGACAC
CGCGGAGGAAGAGGGGGAGGAGGAAGGCGGGAAGGAGGGAGGGAGGGAGG
GCAGGCGTCGGAGCGTGGAAGGGCGAGGAGCGATCTGCCTCTTCCTTTCC
CACCTCCTCTCTTACCACCCTCCCGTCCTCCCCCTCCTCCTCCGTCGGGG
AGAACTCTCCTCCCCCGCCCTTCTCCTCTTAGCTGACTGCATCCCTGCTT
TCCTCCTCTTCCTCCCTCCCTCTCTCCCGCCCTCCATCCCTCCCTTCTCC
CTCCGCGGCACCTCCCTGGTCACGCACGCCCGCGACCTGGCAGTCCTCGC
CGAATTCATTCGGCGATACCCTTTGCCTGCCGCGTTCCGATCCGCCCACT
CCGCCATCATCGCCCTCCTCCACCGGCACCTGCGTCCCGTTGTCCTGCAG
GGGAAGACGTGA
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protein sequence of rna9748

>rna9748-protein ID=rna9748-protein|Name=rna9748|organism=Nannochloropsis gaditana|type=polypeptide|length=257bp
MIKTPDGGWSRYFDLCDTPLTPFPLVPPLSRSTTGPSLCQLTHIPTHTHT
MDGQVELSAPVTASTSRKRNAPASTPTTDQANEGLLSSQPSAAKRQSTGA
GVASSPPPRAHEVTVLLPIDAVGLMIGKGGQTLKRLLEEGNSACAIRVQD
YQEVRAGSKERGIILRGSFEAIENVERAMIDLLRHRRQKAVDAKREREEA
KEGGKEGGKAGGREGEERKRKTLRWLIPAELSGLLIGKKGIGREEIQQES
GAKRREG
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mRNA from alignment at KK037256.1:13756..14693-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9748 ID=rna9748|Name=rna9748|organism=Nannochloropsis gaditana|type=mRNA|length=938bp|location=Sequence derived from alignment at KK037256.1:13756..14693- (Nannochloropsis gaditana)
TGTCCTCTTTCCACTTTTTGCTTTGATTGGAGCCACCAGGGCCATATTGG
GTGCACTGCCGAGCTCCCGTTGCCTACTGAAAGAGAGAGAGACGACCATG
CACCTAGCTTTGTATATCCGCTTCTTGGTTGATTCCGTGATGAAACCCCG
CAATGGCAGGGCGATGAATGATCAAGACGCCAGACGGTGGGTGGTCGCGG
TACTTCGACTTGTGTGACACCCCCTTGACCCCTTTTCCCCTTGTCCCCCC
CCTTTCCAGGAGTACGACGGGACCCTCCTTGTGTCAATTGACGCACATAC
CCACACACACTCACACAATGGACGGCCAAGTTGAGCTCTCCGCCCCTGTC
ACCGCAAGCACGAGCCGCAAGCGTAACGCACCTGCCTCCACCCCCACCAC
CGACCAAGCAAACGAGGGTCTTCTATCTTCTCAACCCTCCGCAGCCAAAC
GCCAGTCTACAGGGGCAGGCGTCGCGTCCTCCCCGCCACCTCGGGCGCAT
GAGGTGACCGTCCTCCTCCCCATCGACGCGGTGGGCCTCATGATTGGGAA
AGGAGGGCAGACCTTGAAGCGTTTGCTCGAGGAGGGGAACAGCGCCTGTG
CCATCCGGGTGCAGGATTATCAGGAAGTGAGAGCAGGGAGCAAGGAGAGG
GGGATCATACTCCGAGGCAGCTTCGAAGCGATCGAGAATGTGGAGCGCGC
CATGATCGACCTCTTGCGTCACCGCCGACAGAAAGCTGTAGACGCGAAGA
GGGAGAGGGAGGAAGCGAAGGAGGGAGGGAAGGAGGGAGGAAAGGCGGGA
GGGAGGGAAGGGGAGGAGAGGAAGCGGAAGACGTTGCGGTGGCTGATTCC
CGCGGAGCTTTCTGGGTTGTTGATTGGGAAAAAAGGCATCGGGCGGGAGG
AGATCCAGCAGGAGTCCGGTGCGAAAAGAAGGGAGGGA
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Coding sequence (CDS) from alignment at KK037256.1:13756..14693-

>rna9748 ID=rna9748|Name=rna9748|organism=Nannochloropsis gaditana|type=CDS|length=771bp|location=Sequence derived from alignment at KK037256.1:13756..14693- (Nannochloropsis gaditana)
ATGATCAAGACGCCAGACGGTGGGTGGTCGCGGTACTTCGACTTGTGTGA
CACCCCCTTGACCCCTTTTCCCCTTGTCCCCCCCCTTTCCAGGAGTACGA
CGGGACCCTCCTTGTGTCAATTGACGCACATACCCACACACACTCACACA
ATGGACGGCCAAGTTGAGCTCTCCGCCCCTGTCACCGCAAGCACGAGCCG
CAAGCGTAACGCACCTGCCTCCACCCCCACCACCGACCAAGCAAACGAGG
GTCTTCTATCTTCTCAACCCTCCGCAGCCAAACGCCAGTCTACAGGGGCA
GGCGTCGCGTCCTCCCCGCCACCTCGGGCGCATGAGGTGACCGTCCTCCT
CCCCATCGACGCGGTGGGCCTCATGATTGGGAAAGGAGGGCAGACCTTGA
AGCGTTTGCTCGAGGAGGGGAACAGCGCCTGTGCCATCCGGGTGCAGGAT
TATCAGGAAGTGAGAGCAGGGAGCAAGGAGAGGGGGATCATACTCCGAGG
CAGCTTCGAAGCGATCGAGAATGTGGAGCGCGCCATGATCGACCTCTTGC
GTCACCGCCGACAGAAAGCTGTAGACGCGAAGAGGGAGAGGGAGGAAGCG
AAGGAGGGAGGGAAGGAGGGAGGAAAGGCGGGAGGGAGGGAAGGGGAGGA
GAGGAAGCGGAAGACGTTGCGGTGGCTGATTCCCGCGGAGCTTTCTGGGT
TGTTGATTGGGAAAAAAGGCATCGGGCGGGAGGAGATCCAGCAGGAGTCC
GGTGCGAAAAGAAGGGAGGGA
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Synonyms
Publications