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Properties
| Property Name | Value |
|---|
| Product | trna-specific adenosine deaminase-like protein 3 |
| Orig transcript id | gnl|cribi|Naga_100781g2.6052.mrna |
| Orig protein id | gnl|cribi|Naga_100781g2.6052 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:4296..6523 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9743 ID=rna9743|Name=rna9743|organism=Nannochloropsis gaditana|type=mRNA|length=456bp
ATGAGGGGTATAGTCCGTCGCGCCGCCCTCCACCAGCTCCGCCCACGTCT
TTCTTCATCTTCTACCATTGCTAGTGCCATGACTATGCGGGCCATGGCAA
CAATGCCCACTCCGAAATTCTTCGACTATGCCACGGTGAAGAAGACCCTC
AACGTCGGACAGGCCTTCACCGCCGTGGAAGAAGCTTTTGCCATGCTCGC
GGATGGGAAAGTCGACGTGCCACAGCCCATGCACATCGGGGTTCATGAGA
CTCCGACAGCGGGTCCCGGCGATTGCCACATCAAGGGCGGTTACATCGAA
GGGAAAACGACTTTTACGGTCAAACTGGCCACGGAGCTCCCGTGGGTACG
CCCGCCCTCCCTCCCGCCCTCCCTCTCGCTCCCTCCTCTTTCCCTCGATC
TTCCTGTGTGCTGTCATTCCTTCCCTCGTCCTCCTCATGGCATGTATTAC
AAATGA back to topprotein sequence of rna9743 >rna9743-protein ID=rna9743-protein|Name=rna9743|organism=Nannochloropsis gaditana|type=polypeptide|length=417bp
MVAESENDMAEMEEIFSLETADEEPTTVEVLVSPIAPHLANRALKRLHSL
LPTPDAQLGHLKRVRKDPDSSSLLLLLSTPARYHALTPSLRLALEQDLDL
HVEVREVPRRPCKTRHEQEIATGLWPLTYQGIEEVVEKEKAALDRDRKGK
EVFADCLGFGWRVHVVMRCVDRVADLVASAEKGDGMGRYKKGGKGGGREG
GREGGWVGCQEGKEEKEKAERGRGVASGRAGGRELAGGAPGLSVLSTSRE
TSSSLKIDSGLGLGLGFNVLIAGERRGKPSGSVCFQGVHGRNLEEAQARE
DKEASWRGALPEDQYLCTGLDAYMTHEPCVMCAMALVHSRIRRVFYCLPC
PEEGALESHFGVHALPSLNHRYRVFRWRGQEEEGQPFPSQGGRGEGGSEE
DWARSDVPVDDIELKVK back to topmRNA from alignment at KK037256.1:4296..6523- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9743 ID=rna9743|Name=rna9743|organism=Nannochloropsis gaditana|type=mRNA|length=2228bp|location=Sequence derived from alignment at KK037256.1:4296..6523- (Nannochloropsis gaditana)
ATGGTGGCAGAATCCGAAAACGATATGGCAGAGATGGAAGAGATATTCAG
CCTGGAAACGGCAGACGAGGTAAGGAAAGCTCCCATAGCCCTTTTCGCGG
AAATTCCCTCGATATTTTCACGTTTCTTCTGCTTAAATCGACTTTTTACC
AAATACATCACATCTCAAAAATTCACGCAGGAACCAACCACAGTCGAGGT
TTTGGTCTCCCCCATAGCCCCCCACCTTGCCAACCGGGCCCTGAAAAGAC
TGCATTCCCTCCTCCCCACCCCAGACGCACAGGTAAGATCCCAACTCATT
TCAATCATTGTCCCTCTTTCATGTCGAAACTTTTTTTGCGTGGCTTGAGA
CCATCCTTACACGCATTCGCCAGCACATAGTCCTCCTCAAGATCATCAGC
GCCTTTCCTCCTTCTCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTC
CCTCTCTTCCTCCCTCCCTTTCGCCCTACCTCTGCTCCCCTCTCTCCAGC
TTGGGCACCTCAAACGCGTCCGAAAAGACCCTGATTCCTCCTCCCTCCTC
CTCCTCCTCTCCACCCCCGCCCGCTACCATGCCCTCACCCCCTCACTTCG
TCTCGCCCTCGAACAAGACTTGGACCTGCATGTGGAGGTTCGGGAGGTGC
CTCGACGTCCGTGCAAGACCCGACATGAGCAGGAAATAGCCACTGGCTTG
TGGCCCCTGACCTACCAAGGGATTGAGGAGGTGGTGGAGAAGGAGAAGGC
CGCCCTGGATAGGTGAGTAAGACTGGGAGGAAAGGGAGGGAGGGAGGGAG
GGAGGGGGGAGGGAGGGAGCGAAGGCGGGAGGAGGCTTTTCGCCAAGCAA
CCGTTCTTCTTTTCCCAACCCTGTTTGATTTTCCTTCCTGCTCTCCTTTC
TCTTCCTCTGACCTGGTCTTGTAAGGGAAGAGATCGAAAGGGCAAGGAAG
TTTTTGCGGATTGTCTGGGGTTTGGCTGGAGGGTCGTGGGTTGGAAGGCC
GGACGAGGAGGAAGGGGGGGGGGAAGGGAAGAGTGAGGAGACGGAGGCTT
CGATGAGGGGCTGTAGGAGCGTTGAAAGGGAGAAAGGGGGAGGGGGGGAG
GGAGGGAGAGAGGGGGAAGGGAGGAGGAAGGGAGGGAGGGCGGCCTTAGT
CGTGAACCCGGAGAATGACGTCATTGTCGCGGGTGCCCTGTCATGGGAGT
CTGAGGGTGGGGTGGGGAGGAGGGAAAAGGAGGAGGAGGAGGGGGAGGAG
GAGGAGGAAGGGAGGGAGGGGGGGATTGAGGGAAGTGGAGGAAAGGAGGA
GGAGGAGGGGGAGGAGGAGGAGGAGGGGGAGGAGGAAAGGATTCTTCGTC
TTTCTTCCTCCGCCACTATTTCTGTCCAAGAGAGGATAAACGCATCGGCG
CCGCCCCTCCCGCCCTCCTTCCCTCCCTCCCTCCCTCCCCCTCCTCCTTC
CCATCCCTTGCAGCATGTGGTGATGCGTTGTGTGGACCGGGTGGCGGATT
TGGTGGCTTCGGCCGAAAAAGGGGACGGGATGGGAAGATACAAGAAGGGG
GGAAAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTGGGTGGGCTG
CCAAGAAGGGAAGGAGGAGAAGGAGAAGGCGGAGAGAGGGCGGGGGGTCG
CGTCAGGCCGTGCTGGAGGGAGGGAGTTAGCGGGCGGGGCCCCAGGCTTG
TCAGTCCTATCAACATCCCGAGAGACTTCATCTTCTTTGAAAATTGATTC
GGGGCTTGGGTTAGGATTAGGGTTCAATGTGCTAATAGCAGGAGAGAGGA
GAGGGAAGCCATCAGGTTCCGTCTGCTTCCAAGGCGTTCACGGGAGGAAT
TTGGAAGAGGCCCAAGCGCGGGAGGACAAGGAGGCATCGTGGAGAGGAGC
GCTCCCTGAGGACCAATATCTGTGCACCGGTTTAGATGCTTACATGACTC
ATGAACCTTGCGTCATGTGCGCCATGGCCCTGGTCCACTCACGGATACGG
AGGGTGTTTTATTGTCTCCCTTGTCCAGAGGAAGGGGCATTGGAGTCCCA
CTTTGGCGTGCATGCTTTGCCGTCGTTGAATCATCGGTATCGTGTGTTTC
GTTGGAGGGGTCAGGAGGAGGAAGGGCAGCCTTTCCCCTCGCAAGGGGGG
AGAGGGGAGGGCGGGAGCGAAGAGGACTGGGCAAGATCTGATGTCCCAGT
CGATGACATTGAACTGAAAGTAAAATAA back to topCoding sequence (CDS) from alignment at KK037256.1:4296..6523- >rna9743 ID=rna9743|Name=rna9743|organism=Nannochloropsis gaditana|type=CDS|length=6270bp|location=Sequence derived from alignment at KK037256.1:4296..6523- (Nannochloropsis gaditana)
CATGTGGTGATGCGTTGTGTGGACCGGGTGGCGGATTTGGTGGCTTCGGC
CGAAAAAGGGGACGGGATGGGAAGATACAAGAAGGGGGGAAAGGGAGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGTGGGTGGGCTGCCAAGAAGGGAAG
GAGGAGAAGGAGAAGGCGGAGAGAGGGCGGGGGGTCGCGTCAGGCCGTGC
TGGAGGGAGGGAGTTAGCGGGCGGGGCCCCAGGCTTGTCAGTCCTATCAA
CATCCCGAGAGACTTCATCTTCTTTGAAAATTGATTCGGGGCTTGGGTTA
GGATTAGGGTTCAATGTGCTAATAGCAGGAGAGAGGAGAGGGAAGCCATC
AGGTTCCGTCTGCTTCCAAGGCGTTCACGGGAGGAATTTGGAAGAGGCCC
AAGCGCGGGAGGACAAGGAGGCATCGTGGAGAGGAGCGCTCCCTGAGGAC
CAATATCTGTGCACCGGTTTAGATGCTTACATGACTCATGAACCTTGCGT
CATGTGCGCCATGGCCCTGGTCCACTCACGGATACGGAGGGTGTTTTATT
GTCTCCCTTGTCCAGAGGAAGGGGCATTGGAGTCCCACTTTGGCGTGCAT
GCTTTGCCGTCGTTGAATCATCGGTATCGTGTGTTTCGTTGGAGGGGTCA
GGAGGAGGAAGGGCAGCCTTTCCCCTCGCAAGGGGGGAGAGGGGAGGGCG
GGAGCGAAGAGGACTGGGCAAGATCTGATGTCCCAGTCGATGACATTGAA
CTGAAAGTAAAATAAAGATCGAAAGGGCAAGGAAGTTTTTGCGGATTGTC
TGGGGTTTGGCTGGAGGGTCCTTGGGCACCTCAAACGCGTCCGAAAAGAC
CCTGATTCCTCCTCCCTCCTCCTCCTCCTCTCCACCCCCGCCCGCTACCA
TGCCCTCACCCCCTCACTTCGTCTCGCCCTCGAACAAGACTTGGACCTGC
ATGTGGAGGTTCGGGAGGTGCCTCGACGTCCGTGCAAGACCCGACATGAG
CAGGAAATAGCCACTGGCTTGTGGCCCCTGACCTACCAAGGGATTGAGGA
GGTGGTGGAGAAGGAGAAGGCCGCCCTGGATAGGAACCAACCACAGTCGA
GGTTTTGGTCTCCCCCATAGCCCCCCACCTTGCCAACCGGGCCCTGAAAA
GACTGCATTCCCTCCTCCCCACCCCAGACGCACAGATGGTGGCAGAATCC
GAAAACGATATGGCAGAGATGGAAGAGATATTCAGCCTGGAAACGGCAGA
CGAGCATGTGGTGATGCGTTGTGTGGACCGGGTGGCGGATTTGGTGGCTT
CGGCCGAAAAAGGGGACGGGATGGGAAGATACAAGAAGGGGGGAAAGGGA
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTGGGTGGGCTGCCAAGAAGG
GAAGGAGGAGAAGGAGAAGGCGGAGAGAGGGCGGGGGGTCGCGTCAGGCC
GTGCTGGAGGGAGGGAGTTAGCGGGCGGGGCCCCAGGCTTGTCAGTCCTA
TCAACATCCCGAGAGACTTCATCTTCTTTGAAAATTGATTCGGGGCTTGG
GTTAGGATTAGGGTTCAATGTGCTAATAGCAGGAGAGAGGAGAGGGAAGC
CATCAGGTTCCGTCTGCTTCCAAGGCGTTCACGGGAGGAATTTGGAAGAG
GCCCAAGCGCGGGAGGACAAGGAGGCATCGTGGAGAGGAGCGCTCCCTGA
GGACCAATATCTGTGCACCGGTTTAGATGCTTACATGACTCATGAACCTT
GCGTCATGTGCGCCATGGCCCTGGTCCACTCACGGATACGGAGGGTGTTT
TATTGTCTCCCTTGTCCAGAGGAAGGGGCATTGGAGTCCCACTTTGGCGT
GCATGCTTTGCCGTCGTTGAATCATCGGTATCGTGTGTTTCGTTGGAGGG
GTCAGGAGGAGGAAGGGCAGCCTTTCCCCTCGCAAGGGGGGAGAGGGGAG
GGCGGGAGCGAAGAGGACTGGGCAAGATCTGATGTCCCAGTCGATGACAT
TGAACTGAAAGTAAAATAAAGATCGAAAGGGCAAGGAAGTTTTTGCGGAT
TGTCTGGGGTTTGGCTGGAGGGTCCTTGGGCACCTCAAACGCGTCCGAAA
AGACCCTGATTCCTCCTCCCTCCTCCTCCTCCTCTCCACCCCCGCCCGCT
ACCATGCCCTCACCCCCTCACTTCGTCTCGCCCTCGAACAAGACTTGGAC
CTGCATGTGGAGGTTCGGGAGGTGCCTCGACGTCCGTGCAAGACCCGACA
TGAGCAGGAAATAGCCACTGGCTTGTGGCCCCTGACCTACCAAGGGATTG
AGGAGGTGGTGGAGAAGGAGAAGGCCGCCCTGGATAGGAACCAACCACAG
TCGAGGTTTTGGTCTCCCCCATAGCCCCCCACCTTGCCAACCGGGCCCTG
AAAAGACTGCATTCCCTCCTCCCCACCCCAGACGCACAGATGGTGGCAGA
ATCCGAAAACGATATGGCAGAGATGGAAGAGATATTCAGCCTGGAAACGG
CAGACGAGCATGTGGTGATGCGTTGTGTGGACCGGGTGGCGGATTTGGTG
GCTTCGGCCGAAAAAGGGGACGGGATGGGAAGATACAAGAAGGGGGGAAA
GGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTGGGTGGGCTGCCAAG
AAGGGAAGGAGGAGAAGGAGAAGGCGGAGAGAGGGCGGGGGGTCGCGTCA
GGCCGTGCTGGAGGGAGGGAGTTAGCGGGCGGGGCCCCAGGCTTGTCAGT
CCTATCAACATCCCGAGAGACTTCATCTTCTTTGAAAATTGATTCGGGGC
TTGGGTTAGGATTAGGGTTCAATGTGCTAATAGCAGGAGAGAGGAGAGGG
AAGCCATCAGGTTCCGTCTGCTTCCAAGGCGTTCACGGGAGGAATTTGGA
AGAGGCCCAAGCGCGGGAGGACAAGGAGGCATCGTGGAGAGGAGCGCTCC
CTGAGGACCAATATCTGTGCACCGGTTTAGATGCTTACATGACTCATGAA
CCTTGCGTCATGTGCGCCATGGCCCTGGTCCACTCACGGATACGGAGGGT
GTTTTATTGTCTCCCTTGTCCAGAGGAAGGGGCATTGGAGTCCCACTTTG
GCGTGCATGCTTTGCCGTCGTTGAATCATCGGTATCGTGTGTTTCGTTGG
AGGGGTCAGGAGGAGGAAGGGCAGCCTTTCCCCTCGCAAGGGGGGAGAGG
GGAGGGCGGGAGCGAAGAGGACTGGGCAAGATCTGATGTCCCAGTCGATG
ACATTGAACTGAAAGTAAAATAAAGATCGAAAGGGCAAGGAAGTTTTTGC
GGATTGTCTGGGGTTTGGCTGGAGGGTCCTTGGGCACCTCAAACGCGTCC
GAAAAGACCCTGATTCCTCCTCCCTCCTCCTCCTCCTCTCCACCCCCGCC
CGCTACCATGCCCTCACCCCCTCACTTCGTCTCGCCCTCGAACAAGACTT
GGACCTGCATGTGGAGGTTCGGGAGGTGCCTCGACGTCCGTGCAAGACCC
GACATGAGCAGGAAATAGCCACTGGCTTGTGGCCCCTGACCTACCAAGGG
ATTGAGGAGGTGGTGGAGAAGGAGAAGGCCGCCCTGGATAGGAACCAACC
ACAGTCGAGGTTTTGGTCTCCCCCATAGCCCCCCACCTTGCCAACCGGGC
CCTGAAAAGACTGCATTCCCTCCTCCCCACCCCAGACGCACAGATGGTGG
CAGAATCCGAAAACGATATGGCAGAGATGGAAGAGATATTCAGCCTGGAA
ACGGCAGACGAGCATGTGGTGATGCGTTGTGTGGACCGGGTGGCGGATTT
GGTGGCTTCGGCCGAAAAAGGGGACGGGATGGGAAGATACAAGAAGGGGG
GAAAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTGGGTGGGCTGC
CAAGAAGGGAAGGAGGAGAAGGAGAAGGCGGAGAGAGGGCGGGGGGTCGC
GTCAGGCCGTGCTGGAGGGAGGGAGTTAGCGGGCGGGGCCCCAGGCTTGT
CAGTCCTATCAACATCCCGAGAGACTTCATCTTCTTTGAAAATTGATTCG
GGGCTTGGGTTAGGATTAGGGTTCAATGTGCTAATAGCAGGAGAGAGGAG
AGGGAAGCCATCAGGTTCCGTCTGCTTCCAAGGCGTTCACGGGAGGAATT
TGGAAGAGGCCCAAGCGCGGGAGGACAAGGAGGCATCGTGGAGAGGAGCG
CTCCCTGAGGACCAATATCTGTGCACCGGTTTAGATGCTTACATGACTCA
TGAACCTTGCGTCATGTGCGCCATGGCCCTGGTCCACTCACGGATACGGA
GGGTGTTTTATTGTCTCCCTTGTCCAGAGGAAGGGGCATTGGAGTCCCAC
TTTGGCGTGCATGCTTTGCCGTCGTTGAATCATCGGTATCGTGTGTTTCG
TTGGAGGGGTCAGGAGGAGGAAGGGCAGCCTTTCCCCTCGCAAGGGGGGA
GAGGGGAGGGCGGGAGCGAAGAGGACTGGGCAAGATCTGATGTCCCAGTC
GATGACATTGAACTGAAAGTAAAATAAAGATCGAAAGGGCAAGGAAGTTT
TTGCGGATTGTCTGGGGTTTGGCTGGAGGGTCCTTGGGCACCTCAAACGC
GTCCGAAAAGACCCTGATTCCTCCTCCCTCCTCCTCCTCCTCTCCACCCC
CGCCCGCTACCATGCCCTCACCCCCTCACTTCGTCTCGCCCTCGAACAAG
ACTTGGACCTGCATGTGGAGGTTCGGGAGGTGCCTCGACGTCCGTGCAAG
ACCCGACATGAGCAGGAAATAGCCACTGGCTTGTGGCCCCTGACCTACCA
AGGGATTGAGGAGGTGGTGGAGAAGGAGAAGGCCGCCCTGGATAGGAACC
AACCACAGTCGAGGTTTTGGTCTCCCCCATAGCCCCCCACCTTGCCAACC
GGGCCCTGAAAAGACTGCATTCCCTCCTCCCCACCCCAGACGCACAGATG
GTGGCAGAATCCGAAAACGATATGGCAGAGATGGAAGAGATATTCAGCCT
GGAAACGGCAGACGAGCATGTGGTGATGCGTTGTGTGGACCGGGTGGCGG
ATTTGGTGGCTTCGGCCGAAAAAGGGGACGGGATGGGAAGATACAAGAAG
GGGGGAAAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTGGGTGGG
CTGCCAAGAAGGGAAGGAGGAGAAGGAGAAGGCGGAGAGAGGGCGGGGGG
TCGCGTCAGGCCGTGCTGGAGGGAGGGAGTTAGCGGGCGGGGCCCCAGGC
TTGTCAGTCCTATCAACATCCCGAGAGACTTCATCTTCTTTGAAAATTGA
TTCGGGGCTTGGGTTAGGATTAGGGTTCAATGTGCTAATAGCAGGAGAGA
GGAGAGGGAAGCCATCAGGTTCCGTCTGCTTCCAAGGCGTTCACGGGAGG
AATTTGGAAGAGGCCCAAGCGCGGGAGGACAAGGAGGCATCGTGGAGAGG
AGCGCTCCCTGAGGACCAATATCTGTGCACCGGTTTAGATGCTTACATGA
CTCATGAACCTTGCGTCATGTGCGCCATGGCCCTGGTCCACTCACGGATA
CGGAGGGTGTTTTATTGTCTCCCTTGTCCAGAGGAAGGGGCATTGGAGTC
CCACTTTGGCGTGCATGCTTTGCCGTCGTTGAATCATCGGTATCGTGTGT
TTCGTTGGAGGGGTCAGGAGGAGGAAGGGCAGCCTTTCCCCTCGCAAGGG
GGGAGAGGGGAGGGCGGGAGCGAAGAGGACTGGGCAAGATCTGATGTCCC
AGTCGATGACATTGAACTGAAAGTAAAATAAAGATCGAAAGGGCAAGGAA
GTTTTTGCGGATTGTCTGGGGTTTGGCTGGAGGGTCCTTGGGCACCTCAA
ACGCGTCCGAAAAGACCCTGATTCCTCCTCCCTCCTCCTCCTCCTCTCCA
CCCCCGCCCGCTACCATGCCCTCACCCCCTCACTTCGTCTCGCCCTCGAA
CAAGACTTGGACCTGCATGTGGAGGTTCGGGAGGTGCCTCGACGTCCGTG
CAAGACCCGACATGAGCAGGAAATAGCCACTGGCTTGTGGCCCCTGACCT
ACCAAGGGATTGAGGAGGTGGTGGAGAAGGAGAAGGCCGCCCTGGATAGG
AACCAACCACAGTCGAGGTTTTGGTCTCCCCCATAGCCCCCCACCTTGCC
AACCGGGCCCTGAAAAGACTGCATTCCCTCCTCCCCACCCCAGACGCACA
GATGGTGGCAGAATCCGAAAACGATATGGCAGAGATGGAAGAGATATTCA
GCCTGGAAACGGCAGACGAG back to top
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