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Properties
| Property Name | Value |
|---|
| Product | F-box domain, cyclin-like protein |
| Orig transcript id | gnl|cribi|Naga_100442g4.7160.mrna |
| Orig protein id | gnl|cribi|Naga_100442g4.7160 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037255.1 | supercontig | KK037255.1:279371..282246 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9730 ID=rna9730|Name=rna9730|organism=Nannochloropsis gaditana|type=mRNA|length=765bp
ATGTGTTTTGGCTCGGCTTTGGCAACTTCAGCTTGCCTACAATTCTACGC
CACACATGGCAAGATACAGGTTGCCTCTTTCTTCATCTCGTCCCACTCAT
TCATTCTTCTTCTGTCACCCAAACAGCACATTCCTCTCCCCTACACCATG
AAGTTCTTGGCCACTACCCTCGTCGCTCTCGCCGCCCCGGCCCTGGCTTT
CATGCCCATGGCCCGCGTGCCTGCCACCCCTGCCACGGCCCTGTCCGCGG
TGATCAAAGCCGGTGGAGACTACTATCCCGGGCAGGTCGACTACGGTTCC
TCCTCCATCGACGTCTACGAAACCCTGAAGCAGACGGGGAAGTTCAACCA
GCTTGCCAAGGCCTTGGAAGCGACCGGGTTGGATAAGGCCCTGGCGCAGG
AGAACGGCATTTTTTGCCTGTACGCGCCCACGGACGAGGCCTTCGAGAAG
GCGGGCGGCGTGGACAAGCTTTTGGAGGACAAAGCGGGGCTGGAGGAGGT
GTTGAAGTACCACGTGGTGAAGCTCTTCGTCAAGGACAAGGAGCACATCC
GCTCGTTCCGCCTCTCCAACAAGGCGACCCTGCAGGGTGGCAAGGTCCGG
GTCCAGGTCAAGGCCAACCCAGATGGGGAATCCTTCGTCATCTTCAACAA
CGGCGAAGCCCAGTGCGTGGACGGCCTCTCCGATATTGACGCGGTCAACG
GCCACATTCATGGCATCTCTGGTATCCTGACCCCCCAGGCCGGCGGCTCC
ATTCCCGTGAAATAA back to topprotein sequence of rna9730 >rna9730-protein ID=rna9730-protein|Name=rna9730|organism=Nannochloropsis gaditana|type=polypeptide|length=567bp
MGIQHSRTLACPSPAPPLHAPPSSRPPPWESKRFPIAFLPVEILTVIFHH
LPICDLQMVGETCQDLQRAVRHDASLWTHVEVPVQDGRLEQTKEEFLCRL
LRQRPRDVHSLSLLGARAVRGDCLMAFGTPLPSAVSSSILSSLSSSPSLG
PASPAVSPPSLTSLRELDLSHCPGLQLSLLERALPALRHSLRSLSLRNTD
HLLNDDAIAVILSRLALPAPSGTTALISLHLGTSTRRAARPSPPLSDHSM
RVIHAACPSLQSLSLHNQTRITDAGLHHLLTPTPLPLSVLDLGLCASLSD
QSILSLAAHCPSLRRLSLRNCWRLTTPAVQALLGTNPHLVALNLYACTFI
TPDAFDPRRFPFLPPALPPALPRLALQEINLSYMRGLHDADLLSLSALTH
HGLREVSIAKCDTVTNEVLVQLCADCRLEALNIADCLRIDASFIHMLAAA
AAAGGRKRPTQCLPPPPPPPPPPPPPPPPPPPPPPPPPPPLRPSSYSSSL
LLLLVPPPLAREPQGFAFVEFYDERDAEYAKRKLDREMLNGRELTVIFAK
QQRKRPDDMRARAQRER back to topmRNA from alignment at KK037255.1:279371..282246+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9730 ID=rna9730|Name=rna9730|organism=Nannochloropsis gaditana|type=mRNA|length=2876bp|location=Sequence derived from alignment at KK037255.1:279371..282246+ (Nannochloropsis gaditana)
CTGTTTTCTCTTTAGGCAGATTGGGGGGCAGAACGGCAAAGTTCCTGCAA
CCTGTGGAGCAGAAACTCAATATATCGCACAATGGGAATCCAACATTCCC
GTACCTTGGCATGTCCATCGCCTGCGCCACcactccacgcccccccttcg
agtcggcctcctccatgggAATCCAAACGATTCCCCATAGCTTTCCTACC
TGTGGAGATCTTGACGGTCATATTTCACCACCTGCCAATCTGCGACCTGC
AAATGGTGGGTGAGACCTGCCAAGACCTTCAACGGGCCGTCCGTCACGAT
GCTAGCCTGTGGACCCACGTGGAGGTGCCGGTCCAAGACGGGCGCCTGGA
GCAAACCAAGGAAGAATTCCTCTGTCGCCTTCTCCGACAACGGCCCCGGG
ACGTgcattccctctccttgttgGGCGCCCGCGCCGTTCGTGGGGACTGC
TTGATGGCCTTCGGCACTCCACTGCCCTCGGCTGTTTCCTCTTCTATACT
CTCGTccttatcctcctctccgtccctggggcccgcctcccccgccgtct
cccccccttccctgacCTCTTTACGCGAGCTGGACCTGTCTCACTGCCCC
GGCCTGCAGCTGTCGCTGCTCGAAcgtgccctccctgccctccggCACAG
CCTCCggagcctctccctccggaACACCGACCATCTCTTAAACGATGACG
CCATCgccgtcatcctctcccggcttgccctccccgccccctcagGGACC
ACGGCTTTGATCTCCCTCCACTTAGGCACCAGTACCCGCCGCGCCGCCCG
CCCCAGCCCCCCCTTGAGCGACCACAGCATGCGCGTCATCCACgctgcct
gcccctccctccagagcctctccctccacaaCCAGACCCGCATCACTGAC
GCTgggctccaccacctcttgaCCCCGACccctttgcccctctccgtcct
cgaTTTGGGCCTatgcgcctccctctcggacCAGTCCATCCTCAGCTTGG
CCGCCCattgtccctccctccgccgcctcagCCTGCGGAACTGCTGGCGC
CTCACCACCCCTGCCGTTCAAGCCCTCCTTGGCACAAATCCCCACCTGGT
GGCCCTCAATCTCTACGCATGCACCTTCATCACTCCCGACGCCTTCGATC
CCcgccgcttccccttcctcccccccgccctcccccccgccttgccccgc
ctcgccctccaggAGATCAACCTCTCCTACATGCGCGGGCTCCACGAcgc
cgacctcctctccctctccgccctcacCCACCACGGGCTTCGAGAAGTTT
CCATCGCCAAGTGCGACACGGTCACGAACGAGGTGCTTGTCCAACTCTGC
GCCGACTGTCGCCTCGAGGCTTTGAACATCGCGGATTGCCTGCGGATCGA
CGCCTCTTTCATCCACATGCTtgccgcggccgccgccgccggggGACGAA
AAAGGCCGACGcagtgcctccctcctcctcctcctcctcctcctcctcct
cctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcc
tcttcgtccctcctcctactcttcgtccctcctcctcctcctcgtccctc
ctcctcttgccagAGAGCCTCAAGGATTCGCCTTCGTCGAATTCTACGAT
GAACGGGTCCgttctccctcattccctccctccctccctccatccatcct
tccttcccacccctccctctctccgtcccctccatcctccctccatcctc
cctccctctgagcctcttccctcctcataACCCCCTCAGGACGCTGAGTA
TGCCAAGCGCAAGCTCGACCGAGAGATGCTGAACGGTCGGGAGCTTACCG
TCATCTTTGccaaggtagggaaggaggggggagggaaggaaagaggggaa
gcgaTGGATGCGGCCGTGCAGGGCCCtgtcatggaggaggagggaagagg
aaaagggaggaagggaaggtggggagagaagggagaaagagaaggaaaaa
ctGACAGGAATGGACTcgttttcctttccagcAACAACGGAAGCGCCCGG
ACGACATGCGCGCGCGAGCCCAGCGAGAACGGTGAGGGATCCATGAGCTG
GGAGGGTGGGGTTGATGAAGTGGGAGGGGTAATGAAGTGGATGAGGTGGG
GACGAGAGGATGGGTGATGAGGTGGGAGGCAGCACGAGGAAGGtttcgag
ggagagggggaacgatgtaagggaaggaaaagagatgaTTGGAtgggaag
gcggaaagaAGCGGGATGGAAGGAACAAGACGATGGCAGGTGAGCCTCCA
CAATTTTTCGCACCcatttgctcctccctccctccttccctccctccttc
cctccctccctccctcccaagctCGCAATCGCCCCGACGACGTCGCTCTC
GCTCTGGCTCCCGCGGCCGTCGCGACGCCGACAggtacgccctccctccc
tctgtttcTTGCCCCGGCCGGCTCGGTCCCTCACTGTCTCTAGATGCCAA
AAGCAGTGAgcgcctttctccctccctcccacctgaacctctttcctctc
ccttcaggAACcggtcctccaccccttcgccCGCACCCCgcaaggagagc
gggaggaaggaacgtgcgcactctccttccgcctccccgccccgacggga
ggcggtggaagagagggaggaagcggggaccgagtgaagaggaaggaaag
ggacaggcgggagacatggaggaaggaggagggaggaaaggattggatag
gaagggaggtgaagacTCCGCCAATCAttaaaaaggggaagggaaaatgg
tATAAAGAAGCTCAGGCGAGGTGAAAGAGGATCGGAGGAGGTAATAATAA
GATAAAGGCGATAGATGCAGCGAAAT back to topCoding sequence (CDS) from alignment at KK037255.1:279371..282246+ >rna9730 ID=rna9730|Name=rna9730|organism=Nannochloropsis gaditana|type=CDS|length=5112bp|location=Sequence derived from alignment at KK037255.1:279371..282246+ (Nannochloropsis gaditana)
ATGGGAATCCAACATTCCCGTACCTTGGCATGTCCATCGCCTGCGCCACc
actccacgcccccccttcgagtcggcctcctccatgggAATCCAAACGAT
TCCCCATAGCTTTCCTACCTGTGGAGATCTTGACGGTCATATTTCACCAC
CTGCCAATCTGCGACCTGCAAATGGTGGGTGAGACCTGCCAAGACCTTCA
ACGGGCCGTCCGTCACGATGCTAGCCTGTGGACCCACGTGGAGGTGCCGG
TCCAAGACGGGCGCCTGGAGCAAACCAAGGAAGAATTCCTCTGTCGCCTT
CTCCGACAACGGCCCCGGGACGTgcattccctctccttgttgGGCGCCCG
CGCCGTTCGTGGGGACTGCTTGATGGCCTTCGGCACTCCACTGCCCTCGG
CTGTTTCCTCTTCTATACTCTCGTccttatcctcctctccgtccctgggg
cccgcctcccccgccgtctcccccccttccctgacCTCTTTACGCGAGCT
GGACCTGTCTCACTGCCCCGGCCTGCAGCTGTCGCTGCTCGAAcgtgccc
tccctgccctccggCACAGCCTCCggagcctctccctccggaACACCGAC
CATCTCTTAAACGATGACGCCATCgccgtcatcctctcccggcttgccct
ccccgccccctcagGGACCACGGCTTTGATCTCCCTCCACTTAGGCACCA
GTACCCGCCGCGCCGCCCGCCCCAGCCCCCCCTTGAGCGACCACAGCATG
CGCGTCATCCACgctgcctgcccctccctccagagcctctccctccacaa
CCAGACCCGCATCACTGACGCTgggctccaccacctcttgaCCCCGACcc
ctttgcccctctccgtcctcgaTTTGGGCCTatgcgcctccctctcggac
CAGTCCATCCTCAGCTTGGCCGCCCattgtccctccctccgccgcctcag
CCTGCGGAACTGCTGGCGCCTCACCACCCCTGCCGTTCAAGCCCTCCTTG
GCACAAATCCCCACCTGGTGGCCCTCAATCTCTACGCATGCACCTTCATC
ACTCCCGACGCCTTCGATCCCcgccgcttccccttcctcccccccgccct
cccccccgccttgccccgcctcgccctccaggAGATCAACCTCTCCTACA
TGCGCGGGCTCCACGAcgccgacctcctctccctctccgccctcacCCAC
CACGGGCTTCGAGAAGTTTCCATCGCCAAGTGCGACACGGTCACGAACGA
GGTGCTTGTCCAACTCTGCGCCGACTGTCGCCTCGAGGCTTTGAACATCG
CGGATTGCCTGCGGATCGACGCCTCTTTCATCCACATGCTtgccgcggcc
gccgccgccggggGACGAAAAAGGCCGACGcagtgcctccctcctcctcc
tcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctc
ctcctcctcctcctcctcctcttcgtccctcctcctactcttcgtccctc
ctcctcctcctcgtccctcctcctcttgccagAGAGCCTCAAGGATTCGC
CTTCGTCGAATTCTACGATGAACGGGACGCTGAGTATGCCAAGCGCAAGC
TCGACCGAGAGATGCTGAACGGTCGGGAGCTTACCGTCATCTTTGccaag
cAACAACGGAAGCGCCCGGACGACATGCGCGCGCGAGCCCAGCGAGAACG
GTGAATGGGAATCCAACATTCCCGTACCTTGGCATGTCCATCGCCTGCGC
CACcactccacgcccccccttcgagtcggcctcctccatgggAATCCAAA
CGATTCCCCATAGCTTTCCTACCTGTGGAGATCTTGACGGTCATATTTCA
CCACCTGCCAATCTGCGACCTGCAAATGGTGGGTGAGACCTGCCAAGACC
TTCAACGGGCCGTCCGTCACGATGCTAGCCTGTGGACCCACGTGGAGGTG
CCGGTCCAAGACGGGCGCCTGGAGCAAACCAAGGAAGAATTCCTCTGTCG
CCTTCTCCGACAACGGCCCCGGGACGTgcattccctctccttgttgGGCG
CCCGCGCCGTTCGTGGGGACTGCTTGATGGCCTTCGGCACTCCACTGCCC
TCGGCTGTTTCCTCTTCTATACTCTCGTccttatcctcctctccgtccct
ggggcccgcctcccccgccgtctcccccccttccctgacCTCTTTACGCG
AGCTGGACCTGTCTCACTGCCCCGGCCTGCAGCTGTCGCTGCTCGAAcgt
gccctccctgccctccggCACAGCCTCCggagcctctccctccggaACAC
CGACCATCTCTTAAACGATGACGCCATCgccgtcatcctctcccggcttg
ccctccccgccccctcagGGACCACGGCTTTGATCTCCCTCCACTTAGGC
ACCAGTACCCGCCGCGCCGCCCGCCCCAGCCCCCCCTTGAGCGACCACAG
CATGCGCGTCATCCACgctgcctgcccctccctccagagcctctccctcc
acaaCCAGACCCGCATCACTGACGCTgggctccaccacctcttgaCCCCG
ACccctttgcccctctccgtcctcgaTTTGGGCCTatgcgcctccctctc
ggacCAGTCCATCCTCAGCTTGGCCGCCCattgtccctccctccgccgcc
tcagCCTGCGGAACTGCTGGCGCCTCACCACCCCTGCCGTTCAAGCCCTC
CTTGGCACAAATCCCCACCTGGTGGCCCTCAATCTCTACGCATGCACCTT
CATCACTCCCGACGCCTTCGATCCCcgccgcttccccttcctcccccccg
ccctcccccccgccttgccccgcctcgccctccaggAGATCAACCTCTCC
TACATGCGCGGGCTCCACGAcgccgacctcctctccctctccgccctcac
CCACCACGGGCTTCGAGAAGTTTCCATCGCCAAGTGCGACACGGTCACGA
ACGAGGTGCTTGTCCAACTCTGCGCCGACTGTCGCCTCGAGGCTTTGAAC
ATCGCGGATTGCCTGCGGATCGACGCCTCTTTCATCCACATGCTtgccgc
ggccgccgccgccggggGACGAAAAAGGCCGACGcagtgcctccctcctc
ctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcct
cctcctcctcctcctcctcctcctcttcgtccctcctcctactcttcgtc
cctcctcctcctcctcgtccctcctcctcttgccagAGAGCCTCAAGGAT
TCGCCTTCGTCGAATTCTACGATGAACGGGACGCTGAGTATGCCAAGCGC
AAGCTCGACCGAGAGATGCTGAACGGTCGGGAGCTTACCGTCATCTTTGc
caagcAACAACGGAAGCGCCCGGACGACATGCGCGCGCGAGCCCAGCGAG
AACGGTGAATGGGAATCCAACATTCCCGTACCTTGGCATGTCCATCGCCT
GCGCCACcactccacgcccccccttcgagtcggcctcctccatgggAATC
CAAACGATTCCCCATAGCTTTCCTACCTGTGGAGATCTTGACGGTCATAT
TTCACCACCTGCCAATCTGCGACCTGCAAATGGTGGGTGAGACCTGCCAA
GACCTTCAACGGGCCGTCCGTCACGATGCTAGCCTGTGGACCCACGTGGA
GGTGCCGGTCCAAGACGGGCGCCTGGAGCAAACCAAGGAAGAATTCCTCT
GTCGCCTTCTCCGACAACGGCCCCGGGACGTgcattccctctccttgttg
GGCGCCCGCGCCGTTCGTGGGGACTGCTTGATGGCCTTCGGCACTCCACT
GCCCTCGGCTGTTTCCTCTTCTATACTCTCGTccttatcctcctctccgt
ccctggggcccgcctcccccgccgtctcccccccttccctgacCTCTTTA
CGCGAGCTGGACCTGTCTCACTGCCCCGGCCTGCAGCTGTCGCTGCTCGA
AcgtgccctccctgccctccggCACAGCCTCCggagcctctccctccgga
ACACCGACCATCTCTTAAACGATGACGCCATCgccgtcatcctctcccgg
cttgccctccccgccccctcagGGACCACGGCTTTGATCTCCCTCCACTT
AGGCACCAGTACCCGCCGCGCCGCCCGCCCCAGCCCCCCCTTGAGCGACC
ACAGCATGCGCGTCATCCACgctgcctgcccctccctccagagcctctcc
ctccacaaCCAGACCCGCATCACTGACGCTgggctccaccacctcttgaC
CCCGACccctttgcccctctccgtcctcgaTTTGGGCCTatgcgcctccc
tctcggacCAGTCCATCCTCAGCTTGGCCGCCCattgtccctccctccgc
cgcctcagCCTGCGGAACTGCTGGCGCCTCACCACCCCTGCCGTTCAAGC
CCTCCTTGGCACAAATCCCCACCTGGTGGCCCTCAATCTCTACGCATGCA
CCTTCATCACTCCCGACGCCTTCGATCCCcgccgcttccccttcctcccc
cccgccctcccccccgccttgccccgcctcgccctccaggAGATCAACCT
CTCCTACATGCGCGGGCTCCACGAcgccgacctcctctccctctccgccc
tcacCCACCACGGGCTTCGAGAAGTTTCCATCGCCAAGTGCGACACGGTC
ACGAACGAGGTGCTTGTCCAACTCTGCGCCGACTGTCGCCTCGAGGCTTT
GAACATCGCGGATTGCCTGCGGATCGACGCCTCTTTCATCCACATGCTtg
ccgcggccgccgccgccggggGACGAAAAAGGCCGACGcagtgcctccct
cctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctcctcttcgtccctcctcctactctt
cgtccctcctcctcctcctcgtccctcctcctcttgccagAGAGCCTCAA
GGATTCGCCTTCGTCGAATTCTACGATGAACGGGACGCTGAGTATGCCAA
GCGCAAGCTCGACCGAGAGATGCTGAACGGTCGGGAGCTTACCGTCATCT
TTGccaagcAACAACGGAAGCGCCCGGACGACATGCGCGCGCGAGCCCAG
CGAGAACGGTGA back to top
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