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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF408 |
| Orig transcript id | gnl|cribi|Naga_100442g2.7162.mrna |
| Orig protein id | gnl|cribi|Naga_100442g2.7162 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037255.1 | supercontig | KK037255.1:274312..276594 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9728 ID=rna9728|Name=rna9728|organism=Nannochloropsis gaditana|type=mRNA|length=1185bp
ATGAGGACCCGCCCTCCGGCGCCAACACCGGTCCTTCTCGTGCTGACTAT
TTCCCATGCAGTCTGCGCCAAGAGAAATAGTGGCTGGCTCGAGCCCTGGC
CGCGCAAGATCGTACAGCAGGATTGCAGAGGCTACTTTCCAAAGACGACA
GACCTAGTGCTTCCTGCCTCAGTGGCTACATCCCATTATTCCTCCCTCTG
GACAGCCACAGCACTGCCTTCACTCAGCATGGTGATAAATAGTATCTCCG
CTGCCCGCCCTCCTCTCCTCGACCGTGGTAATGTCCCGCCCATACCACCC
GCGCGTGACGTCGGGTGGGGGGGAGATGGGCGTCCTGAACGCAACGATGC
TTATCACGACAAAATCTACGGACAGCACACGCCCGCCTCCCTAGCCGGGT
CAGCAACACCATCCTTGGCTCCTCGAGTGTATTTATTCACGAAATACCCG
GTGCCCGGCCAGGTCAAGACCAGGATGATCCCCGCCTTGGGGCGTGAAGG
GGCAATGAGGCTGCACCGCCGCTTGGTCCACCGGACCTTGGCGTCTCTGG
ATGCTTTTCGGAGGCAAGGGTGCCCGGGCCGCAGAAAGAGGGGCCAGGAC
GCACGCGGGGAAGGGGCGGTCGTGGATTGCCGCGTCCGGTACGACGATGG
CTTGACCGGACAGGGCGGGATGGCCTTGATGCAGGCGTGGCTGGGGATGG
ACTGGATCTACGAGGCGCAAGGCCCCGGGGATTTGGGGGCTCGCCTGGCC
GCCGCGACAGCCATGGCCGACGGGGGCGAGGAAGGGGTCGGGTCTGTGGT
CGTGGTCGGGAGCGACTGCCCCTTCCTCCGTCCCCGGCACCTGCGGGCGG
CAATCCGCGCCCTGTCCGACACCCAAGAGGGCGGAGGAGAGGAGGAGGAG
GAGGAAGGGGGGCATGACCTGGTGCTTGGTCCGGCCACGGACGGGGGGTA
TTGGTTGGTAGGCCTCCGTCGGCCCTGCCCCGCCCTCTTTAGGGACGTGG
ATTGGGGCACCTCGCGCGTGCTGAACCAGACGTTGGCCCGCGCCGAGAGC
CTGGGGTTGAAGGTGAAGCTTTTGGAGGCGCTCTCCGACATGGACCGGCC
CCAAGACCTGGCCCTCTGGCGCCCTCCGCCCCTGACCTCGGTGGTAATCC
CTGTGGTGAACGAGGCGGAGGAGGGAGGAAGGTGA back to topprotein sequence of rna9728 >rna9728-protein ID=rna9728-protein|Name=rna9728|organism=Nannochloropsis gaditana|type=polypeptide|length=574bp
MDRLGPAKWCGRQSILVTYKEQKRKGADKKSGKDDVRVRACALPFRPSMA
GLPTSTARAPQQRQPKRGLQGPETELIDAKLLEMQFKLLSTNEPVTEVEL
YACQPWFLPEHFAGVVEELAAEGHCGHPVCKKTLNATQGGSGASGVKVGQ
KRVDMKAKKVVDITQVHAMFCSDVCEGAARSFLAQLSTEGICFRPVARAY
LAQKRAQAAGQELVTPSPSYVYDLVAKRHEARGNPVDKNGMDRKANKAMA
CEEKNEEGPGPPGVPVPPPGQPRGPPGLGTGHEGCDSEKMELGGKEGRGP
LKMKVLERERPVAPRPLSVWTTRGDIVEGHAVSDMLSGTQKERRRVEEGR
PRDGEGQEGEEKEEESVSMGRGDGEDADEAFGAPVGHLRSLVREAPAMVA
GDFFLQLWSTLSSWVSPASHQYVALLASNGGDENAALRTVHGNPTDPLQV
QRALLDVQQRERALGGMLAHHVTGAMEIMGLTKALAPSTGTHRLQGLLST
FDLYRPLPSFLSSAHYTAMALLFMEVLFQGELTELEGEEDEQEQRERLKE
SVLQKLKLSTAEYASLKRDLEISP back to topmRNA from alignment at KK037255.1:274312..276594- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9728 ID=rna9728|Name=rna9728|organism=Nannochloropsis gaditana|type=mRNA|length=2283bp|location=Sequence derived from alignment at KK037255.1:274312..276594- (Nannochloropsis gaditana)
ATGGATCGGTTGGGACCTGCCAAGTGGTGCGGACGCCAAAGCATCTTAGT
TACATATAAGGAACAAAAAAGAAAAGGGGCTGATAAAAAAAGTGGCAAAG
ATGACGTACGGGTGCGGTGTCATTTTGCTTTTGCTTGGGGGGGCAGGTTT
TTTATCCGTACACTTTCGTCTAAAAGGCTGCAGAGCCTTAAATGAGACGA
TTTGTTATTAAAGAATAGGGCGCTTGATCCATATCATTTCGCACTCCACT
GTCCGATGCATTGTCAGGGCAAGTCTTTGGAACATGAAGGGAAGGGGGAG
GAGGTTATTCTGGACGTATTTTGTCGAAGCGAAACGCTCTTAGAGAGTAC
TCGTGATGTTTGAAATACTTTGTGGATGACAAATGTAGGGATAATATAAT
CCCGCTGCTTATATGAGACAAAGACGGGTATGTGTGAAGCCTGCAGCTTC
CCGGTGGACCTGCGGCTGTAAACTCAAGGAGGCACTGATTCTCCCCTTGA
GGCGCCGTCTGTCCTGACCCACTTCGTACGCCCATTTACTACCCATCTTA
CTACTACTTTACTTACATCTTTCTTCTCCATTTTCTCCTTATGATTCTCT
CACAGGGCCTGTGCTCTCCCCTTTCGACCTAGCATGGCCGGGCTCCCTAC
CTCCACCGCCCGGGCACCTCAACAACGGCAGCCCAAAAGGGGACTGCAGG
GTCCTGAGACAGAGTTGATAGATGCCAAGCTTTTGGAAATGCAATTTAAA
CTTCTGTCCACGAACGAGGTGAGACAAAAGCGAGGAGACCCGCAGGGAAT
CATCAGCTTCTGATTTCTTTCGATTCGTTCCCCACAGCCCGTGACGGAGG
TAGAGCTGTACGCATGCCAACCCTGGTTCCTCCCCGAGCATTTCGCCGGA
GTGGTCGAAGAACTGGCAGCGGAGGGACATTGCGGGCATCCTGTGTGCAA
AAAAACTTTGAACGCGACCCAGGGAGGCTCTGGCGCTAGTGGTGTCAAAG
TCGGACAAAAACGGGTGGATATGAAGGCAAAAAAAGTGGTGGATATCACT
CAGGTGCATGCCATGTTTTGCAGTGATGTGTGCGAGGGGGCGGCACGCTC
CTTTCTGGCCCAATTGTCCACGGAGGGCATTTGTTTCCGTCCGGTTGCGC
GTGCTTATCTGGCACAGAAGCGGGCACAGGCCGCGGGGCAAGAACTCGTC
ACGCCGTCCCCGTCCTACGTGTACGACCTCGTGGCCAAGAGGCATGAGGC
ACGAGGGAATCCGGTGGATAAAAATGGAATGGACCGGAAAGCAAACAAGG
CCATGGCATGCGAGGAAAAGAACGAGGAAGGCCCTGGACCTCCAGGCGTG
CCCGTCCCACCTCCAGGTCAGCCTCGAGGCCCCCCTGGACTAGGCACAGG
CCACGAAGGCTGTGACAGTGAGAAGATGGAGTTGGGAGGGAAGGAAGGTC
GGGGCCCCTTGAAGATGAAGGTGCTAGAGCGAGAGCGACCGGTGGCGCCC
CGTCCCTTAAGCGTGTGGACGACGCGAGGAGACATCGTGGAGGGGCATGC
GGTGTCCGACATGCTATCGGGTACACAAAAAGAGCGGCGACGTGTCGAGG
AAGGAAGGCCAAGAGATGGGGAGGGGCAGGAAGGAGAGGAAAAGGAGGAG
GAGTCGGTCTCGATGGGCCGCGGGGACGGGGAGGACGCAGACGAAGCATT
CGGAGCCCCGGTGGGGCATCTTCGGAGCCTGGTCCGGGAGGCCCCTGCGA
TGGTAGCGGGGGATTTCTTCTTGCAGCTATGGTCAACCCTGAGCAGTTGG
GTGTCCCCCGCCTCGCATCAATACGTCGCCCTTCTCGCATCGAACGGGGG
CGACGAGAACGCTGCTTTACGGACCGTACATGGCAACCCCACGGATCCCT
TGCAGGTACAACGGGCACTTCTAGACGTTCAGCAGCGGGAAAGGGCGCTC
GGTGGTATGTTGGCGCATCACGTGACGGGCGCGATGGAGATAATGGGGTT
GACGAAAGCCCTGGCGCCCTCGACGGGCACTCATCGATTGCAAGGACTCC
TTTCTACATTTGACTTATACCGCCCATTGCCCTCTTTTCTGTCATCTGCG
CATTATACGGCGATGGCGTTGCTGTTCATGGAAGTTTTGTTCCAGGGCGA
GCTGACGGAATTGGAGGGAGAGGAGGACGAGCAGGAGCAGAGGGAGAGGT
TGAAAGAGAGTGTCTTGCAGAAACTAAAACTGTCGACGGCGGAGTATGCA
TCGTTGAAACGTGACTTGGAAATATCGCCTTAA back to topCoding sequence (CDS) from alignment at KK037255.1:274312..276594- >rna9728 ID=rna9728|Name=rna9728|organism=Nannochloropsis gaditana|type=CDS|length=5175bp|location=Sequence derived from alignment at KK037255.1:274312..276594- (Nannochloropsis gaditana)
CCCGTGACGGAGGTAGAGCTGTACGCATGCCAACCCTGGTTCCTCCCCGA
GCATTTCGCCGGAGTGGTCGAAGAACTGGCAGCGGAGGGACATTGCGGGC
ATCCTGTGTGCAAAAAAACTTTGAACGCGACCCAGGGAGGCTCTGGCGCT
AGTGGTGTCAAAGTCGGACAAAAACGGGTGGATATGAAGGCAAAAAAAGT
GGTGGATATCACTCAGGTGCATGCCATGTTTTGCAGTGATGTGTGCGAGG
GGGCGGCACGCTCCTTTCTGGCCCAATTGTCCACGGAGGGCATTTGTTTC
CGTCCGGTTGCGCGTGCTTATCTGGCACAGAAGCGGGCACAGGCCGCGGG
GCAAGAACTCGTCACGCCGTCCCCGTCCTACGTGTACGACCTCGTGGCCA
AGAGGCATGAGGCACGAGGGAATCCGGTGGATAAAAATGGAATGGACCGG
AAAGCAAACAAGGCCATGGCATGCGAGGAAAAGAACGAGGAAGGCCCTGG
ACCTCCAGGCGTGCCCGTCCCACCTCCAGGTCAGCCTCGAGGCCCCCCTG
GACTAGGCACAGGCCACGAAGGCTGTGACAGTGAGAAGATGGAGTTGGGA
GGGAAGGAAGGTCGGGGCCCCTTGAAGATGAAGGTGCTAGAGCGAGAGCG
ACCGGTGGCGCCCCGTCCCTTAAGCGTGTGGACGACGCGAGGAGACATCG
TGGAGGGGCATGCGGTGTCCGACATGCTATCGGGTACACAAAAAGAGCGG
CGACGTGTCGAGGAAGGAAGGCCAAGAGATGGGGAGGGGCAGGAAGGAGA
GGAAAAGGAGGAGGAGTCGGTCTCGATGGGCCGCGGGGACGGGGAGGACG
CAGACGAAGCATTCGGAGCCCCGGTGGGGCATCTTCGGAGCCTGGTCCGG
GAGGCCCCTGCGATGGTAGCGGGGGATTTCTTCTTGCAGCTATGGTCAAC
CCTGAGCAGTTGGGTGTCCCCCGCCTCGCATCAATACGTCGCCCTTCTCG
CATCGAACGGGGGCGACGAGAACGCTGCTTTACGGACCGTACATGGCAAC
CCCACGGATCCCTTGCAGGTACAACGGGCACTTCTAGACGTTCAGCAGCG
GGAAAGGGCGCTCGGTGGTATGTTGGCGCATCACGTGACGGGCGCGATGG
AGATAATGGGGTTGACGAAAGCCCTGGCGCCCTCGACGGGCACTCATCGA
TTGCAAGGACTCCTTTCTACATTTGACTTATACCGCCCATTGCCCTCTTT
TCTGTCATCTGCGCATTATACGGCGATGGCGTTGCTGTTCATGGAAGTTT
TGTTCCAGGGCGAGCTGACGGAATTGGAGGGAGAGGAGGACGAGCAGGAG
CAGAGGGAGAGGTTGAAAGAGAGTGTCTTGCAGAAACTAAAACTGTCGAC
GGCGGAGTATGCATCGTTGAAACGTGACTTGGAAATATCGCCTTAAGGCC
TGTGCTCTCCCCTTTCGACCTAGCATGGCCGGGCTCCCTACCTCCACCGC
CCGGGCACCTCAACAACGGCAGCCCAAAAGGGGACTGCAGGGTCCTGAGA
CAGAGTTGATAGATGCCAAGCTTTTGGAAATGCAATTTAAACTTCTGTCC
ACGAACGAGATGGATCGGTTGGGACCTGCCAAGTGGTGCGGACGCCAAAG
CATCTTAGTTACATATAAGGAACAAAAAAGAAAAGGGGCTGATAAAAAAA
GTGGCAAAGATGACGTACGGGTGCGCCCGTGACGGAGGTAGAGCTGTACG
CATGCCAACCCTGGTTCCTCCCCGAGCATTTCGCCGGAGTGGTCGAAGAA
CTGGCAGCGGAGGGACATTGCGGGCATCCTGTGTGCAAAAAAACTTTGAA
CGCGACCCAGGGAGGCTCTGGCGCTAGTGGTGTCAAAGTCGGACAAAAAC
GGGTGGATATGAAGGCAAAAAAAGTGGTGGATATCACTCAGGTGCATGCC
ATGTTTTGCAGTGATGTGTGCGAGGGGGCGGCACGCTCCTTTCTGGCCCA
ATTGTCCACGGAGGGCATTTGTTTCCGTCCGGTTGCGCGTGCTTATCTGG
CACAGAAGCGGGCACAGGCCGCGGGGCAAGAACTCGTCACGCCGTCCCCG
TCCTACGTGTACGACCTCGTGGCCAAGAGGCATGAGGCACGAGGGAATCC
GGTGGATAAAAATGGAATGGACCGGAAAGCAAACAAGGCCATGGCATGCG
AGGAAAAGAACGAGGAAGGCCCTGGACCTCCAGGCGTGCCCGTCCCACCT
CCAGGTCAGCCTCGAGGCCCCCCTGGACTAGGCACAGGCCACGAAGGCTG
TGACAGTGAGAAGATGGAGTTGGGAGGGAAGGAAGGTCGGGGCCCCTTGA
AGATGAAGGTGCTAGAGCGAGAGCGACCGGTGGCGCCCCGTCCCTTAAGC
GTGTGGACGACGCGAGGAGACATCGTGGAGGGGCATGCGGTGTCCGACAT
GCTATCGGGTACACAAAAAGAGCGGCGACGTGTCGAGGAAGGAAGGCCAA
GAGATGGGGAGGGGCAGGAAGGAGAGGAAAAGGAGGAGGAGTCGGTCTCG
ATGGGCCGCGGGGACGGGGAGGACGCAGACGAAGCATTCGGAGCCCCGGT
GGGGCATCTTCGGAGCCTGGTCCGGGAGGCCCCTGCGATGGTAGCGGGGG
ATTTCTTCTTGCAGCTATGGTCAACCCTGAGCAGTTGGGTGTCCCCCGCC
TCGCATCAATACGTCGCCCTTCTCGCATCGAACGGGGGCGACGAGAACGC
TGCTTTACGGACCGTACATGGCAACCCCACGGATCCCTTGCAGGTACAAC
GGGCACTTCTAGACGTTCAGCAGCGGGAAAGGGCGCTCGGTGGTATGTTG
GCGCATCACGTGACGGGCGCGATGGAGATAATGGGGTTGACGAAAGCCCT
GGCGCCCTCGACGGGCACTCATCGATTGCAAGGACTCCTTTCTACATTTG
ACTTATACCGCCCATTGCCCTCTTTTCTGTCATCTGCGCATTATACGGCG
ATGGCGTTGCTGTTCATGGAAGTTTTGTTCCAGGGCGAGCTGACGGAATT
GGAGGGAGAGGAGGACGAGCAGGAGCAGAGGGAGAGGTTGAAAGAGAGTG
TCTTGCAGAAACTAAAACTGTCGACGGCGGAGTATGCATCGTTGAAACGT
GACTTGGAAATATCGCCTTAAGGCCTGTGCTCTCCCCTTTCGACCTAGCA
TGGCCGGGCTCCCTACCTCCACCGCCCGGGCACCTCAACAACGGCAGCCC
AAAAGGGGACTGCAGGGTCCTGAGACAGAGTTGATAGATGCCAAGCTTTT
GGAAATGCAATTTAAACTTCTGTCCACGAACGAGATGGATCGGTTGGGAC
CTGCCAAGTGGTGCGGACGCCAAAGCATCTTAGTTACATATAAGGAACAA
AAAAGAAAAGGGGCTGATAAAAAAAGTGGCAAAGATGACGTACGGGTGCG
CCCGTGACGGAGGTAGAGCTGTACGCATGCCAACCCTGGTTCCTCCCCGA
GCATTTCGCCGGAGTGGTCGAAGAACTGGCAGCGGAGGGACATTGCGGGC
ATCCTGTGTGCAAAAAAACTTTGAACGCGACCCAGGGAGGCTCTGGCGCT
AGTGGTGTCAAAGTCGGACAAAAACGGGTGGATATGAAGGCAAAAAAAGT
GGTGGATATCACTCAGGTGCATGCCATGTTTTGCAGTGATGTGTGCGAGG
GGGCGGCACGCTCCTTTCTGGCCCAATTGTCCACGGAGGGCATTTGTTTC
CGTCCGGTTGCGCGTGCTTATCTGGCACAGAAGCGGGCACAGGCCGCGGG
GCAAGAACTCGTCACGCCGTCCCCGTCCTACGTGTACGACCTCGTGGCCA
AGAGGCATGAGGCACGAGGGAATCCGGTGGATAAAAATGGAATGGACCGG
AAAGCAAACAAGGCCATGGCATGCGAGGAAAAGAACGAGGAAGGCCCTGG
ACCTCCAGGCGTGCCCGTCCCACCTCCAGGTCAGCCTCGAGGCCCCCCTG
GACTAGGCACAGGCCACGAAGGCTGTGACAGTGAGAAGATGGAGTTGGGA
GGGAAGGAAGGTCGGGGCCCCTTGAAGATGAAGGTGCTAGAGCGAGAGCG
ACCGGTGGCGCCCCGTCCCTTAAGCGTGTGGACGACGCGAGGAGACATCG
TGGAGGGGCATGCGGTGTCCGACATGCTATCGGGTACACAAAAAGAGCGG
CGACGTGTCGAGGAAGGAAGGCCAAGAGATGGGGAGGGGCAGGAAGGAGA
GGAAAAGGAGGAGGAGTCGGTCTCGATGGGCCGCGGGGACGGGGAGGACG
CAGACGAAGCATTCGGAGCCCCGGTGGGGCATCTTCGGAGCCTGGTCCGG
GAGGCCCCTGCGATGGTAGCGGGGGATTTCTTCTTGCAGCTATGGTCAAC
CCTGAGCAGTTGGGTGTCCCCCGCCTCGCATCAATACGTCGCCCTTCTCG
CATCGAACGGGGGCGACGAGAACGCTGCTTTACGGACCGTACATGGCAAC
CCCACGGATCCCTTGCAGGTACAACGGGCACTTCTAGACGTTCAGCAGCG
GGAAAGGGCGCTCGGTGGTATGTTGGCGCATCACGTGACGGGCGCGATGG
AGATAATGGGGTTGACGAAAGCCCTGGCGCCCTCGACGGGCACTCATCGA
TTGCAAGGACTCCTTTCTACATTTGACTTATACCGCCCATTGCCCTCTTT
TCTGTCATCTGCGCATTATACGGCGATGGCGTTGCTGTTCATGGAAGTTT
TGTTCCAGGGCGAGCTGACGGAATTGGAGGGAGAGGAGGACGAGCAGGAG
CAGAGGGAGAGGTTGAAAGAGAGTGTCTTGCAGAAACTAAAACTGTCGAC
GGCGGAGTATGCATCGTTGAAACGTGACTTGGAAATATCGCCTTAAGGCC
TGTGCTCTCCCCTTTCGACCTAGCATGGCCGGGCTCCCTACCTCCACCGC
CCGGGCACCTCAACAACGGCAGCCCAAAAGGGGACTGCAGGGTCCTGAGA
CAGAGTTGATAGATGCCAAGCTTTTGGAAATGCAATTTAAACTTCTGTCC
ACGAACGAGATGGATCGGTTGGGACCTGCCAAGTGGTGCGGACGCCAAAG
CATCTTAGTTACATATAAGGAACAAAAAAGAAAAGGGGCTGATAAAAAAA
GTGGCAAAGATGACGTACGGGTGCG back to top
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