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Properties
| Property Name | Value |
|---|
| Product | splicing arginine serine-rich 2 |
| Orig transcript id | gnl|cribi|Naga_100487g3.5517.mrna |
| Orig protein id | gnl|cribi|Naga_100487g3.5517 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037255.1 | supercontig | KK037255.1:245070..247347 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9720 ID=rna9720|Name=rna9720|organism=Nannochloropsis gaditana|type=mRNA|length=2073bp
TGGCATCATCTCCAGGGCTTGTCTTCCTCGTGTCATCGCTGTGTGTGGTA
GAGGGGCGCATGGAGGGAATGAGGAGGCAGTTAAGGATACGTGAAGACGC
TGAGGTGGAGATGACGAAGAATATCAGGGTGATGCGACATACGTGCCCCC
CGAGAGGGTGGGTGGGGTGACTCCTTCGGCCTTAAATTTTGTCACGATTT
CTTCAAATCCCGCACCCTACACGCAATGACATGACAAAAGAGTATGTGGA
AGGAGGATGAGATGCGCTTTCGTTCCCGGCGGTCCCCCGTTCTTGGTCGT
CATGGCATGGTGGCGACATCCCAGCCCCTGGCCTCGCAGGCGGGCCTCGA
GGTCCTGAAGGCGGGGGGAAACGCCGTGGACGCCGCCATTGCCGTGGCTG
CCGTCCTGAATGTGACGGAGCCGTGTTCGACGGGCCTTGGCGGGGACTGT
TTCATGCTGTATTACGAGGCGGCAACGGAAAAAGTGCACGGCCTGAATGG
GAGCGGTCGAAGCCCGCGGGCCCTGACACTGGAGCGAGCCCGGGCGGAGG
CGCGGAAGACGGGCGCCAGTGAAGAGGACGACGAGATGGATCCTACGCAC
GTTCATTGTGTCACGGTGCCGGGGACGGCTGCAGGATGGGCCGACAGCCT
GGAACGCTTCGGCTCGGGCGGGGCCTTCACCCTCTCCCGTGTGCTCGCCC
CCGCCGTCCGCCTGGCCGACGAAGGCTTCCCCGTGGGCCCCGTCACGGCG
CACTGGTGGAGGGAGAACGAAAAGCAACTTAACCGCCCAGGCAACCACCA
AGAGGAGCTCTTGTCCCCCGCCACGGGGCGGGCGCCTGTGGCGGGGGAGG
TGTTTCGCAACCCCGCCCTGGCAGCCACGATGCGGGAGTTGGGGGCCGGG
GGCAAGGAAGCCTTCTACCAAGGGAGGGTGGGACGGGCCATCGTGGAGGT
GGTGCGGGCACAGGGGGGCTGCCTGACGCTGGAGGACCTGGCGGCGCACG
AGAGCGCGTGGGTGGAGCCCATTTTCACCGATTACGGCCCGGTGCGCGTC
TGGGAGATTCCCCCCAACGGGCAGGGGCTGACGGCCTTACTCGCCCTCAA
TTACCTGAGCGCGCTGGACCGACTGGAGGGACTCCCGCACAACGGCCCGG
ACTATTTGCACCAGCTCCTCGAGGTGATGCGCCTGGCCTTTGCGGACACC
CGCTACTTCGTGGCCGACCCCGCCCTCTGCCCCGCCCCCCTACCCGACCT
CCTCTCCCCCGCCTACGCCGCCCGCCGCGTCGCAGGCTTCCACCCCACGC
GCGCACAGGCCGACGTCCAGGCGGGCACGCCCACCCGGTCCTCCTCTACG
GTCTCCTTCCAAGTGGTGGACCCCGCGGGGAACGCCGTCTCCTTCGTCAA
CAGCAACTACATGCACTTCGGCTCCGGCCTCGTGCCCCGGGGCTGCGGCT
TCACACTGCAGAACCGCGGGCACAACTTCTCCCTGAGCCCGACCCACCCC
AACGTCCTCGCGCCCGGGAAGCGGCCCTTCCACACCATCATCCCGGGCCT
CGCCACCCGCCTCGACTCGGGCGCCCTGTATGCCTCCTTCAGCAACATGG
GCGGGTTCATGCAGCCCCAGGGGCACGTCCAGCTCCTCCTCAACCTCCTC
CTCCACCGCATGGACCCCCAGGCCGCCGTGGATGCCCCCCGATTCTGTAT
CCAGGACGGGAGCGCGCAGGGGGCAGCGGCTCTGGAGGAAGGGATCGAGG
AGGACGTGCTGGAGGAGCTCCGAGCGCGGGGCCACCGGGTGGCGGGGGAG
GAGCGGCGGGGATACGCTCACCGGGTCGTCTTTGGGAAGGCGCAGGTGAT
CGTGAGGGACCCAGTTACGGGGGTGCTCTGGGGGGGCTCAGACGGGCGGG
GGGACGGGTGCGTGTATGGCTGGTAGGGAGGGAGGGAGGGAGGGAGGGAT
CGGGGCCTCGCCCGGAAGCCTTCTCGTGGGGAAGGGAGCGTGACGAGGCG
GAGGCCCGAATTGCAGGGAGAGGGGGAAGAGGGGGTAAGGGGTTCACGAA
AGCAAACAGAGAGGGAACAAGGA back to topprotein sequence of rna9720 >rna9720-protein ID=rna9720-protein|Name=rna9720|organism=Nannochloropsis gaditana|type=polypeptide|length=185bp
MGDNGENGEPNRDGGGGAGGRGPPKIDGMTTLKIDNIRYDCTTEDLRELF
KDTGEIGDVYIPRDHNSGDNRGFAFVRYHEKEDAERALEKVDGTDFKGRD
LRVSVATRKRPDHFRDGGGGHRGGDEAAAATDDDRDRRGGYYGGGGGGYD
DRGGRGYGGGYPDRRDRSRSPPRRRSRSRSPPRYD back to topmRNA from alignment at KK037255.1:245070..247347- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9720 ID=rna9720|Name=rna9720|organism=Nannochloropsis gaditana|type=mRNA|length=2278bp|location=Sequence derived from alignment at KK037255.1:245070..247347- (Nannochloropsis gaditana)
CCGCGCCTCAAGAGCCCATCTCGCCCGTGCTCACCCTCACAAGGTGGTGC
ACCCGTCTCACCTATCGCACCTCCCTCTTACCAGCAAGTTATACAGCATG
GGTGACAATGGGGAAAACGGGGAGCCTAATCGCGACGGTGGTGGAGGGGC
CGGAGGGCGCGGCCCCCCCAAAATCGACGGCATGACGGTAAGAGAACAAT
ATACCTTCTTTGAGCCCGGGTTGAGAGGGAAGTAAAGGCAGCTTGTTTTA
ACGGATGATTGAAGAGTCGCCTGGGTGCTTGGAGAAATAGGGACCGGGAA
GTGTCGCGCGGATGGAGTTTGTGGAGACTGAGACGGGCTGTGAGCCTTGG
GAGAAGCGTCGGAGTGATGCCGAATGGCGAGGGCCCCGGTCCTGGCGTGA
ATTGTGGCCTGCTCCTGACCTGACGTGGATCTAAACCCTTGCGTCTGACT
GATATCCCCCCAGACCCTCAAGATCGACAACATCCGCTACGACTGCACCA
CGGAGGACCTGCGGGAGCTGTTCAAAGAGTAAGTGCCTAGTCCGCGATCC
CGTCGAGAGCCCGCCCGGGCTGGGCCCTGCCTCCCTCTGTGCCACCTGAA
CGGCCGGGGACCCTCCTGTGTGTGTCTGAGCCCCTTCTAACCCGCGATTT
ACTCCGACTGTCTGCGCACGGAGGGCGGAAGGGAGGGCGGGAAAGTGAGC
GAGGGGGAGGAAAGAGGTGGCGTCGTGGCAGCAGTGGCAGAAGTCTGCGG
GGAAACGTGTGTTGCTGTGTGCCTGTAGCAATTCCAGTGCTAGCAGTGAC
AGAAGTCTGCGGGGAAACGCGTGTTGCTGTGTGCCTGTAGCAATTCCAGT
GCCAGCAGTGACAGAAGTCTGCGGGGAAACGCGTGTTGCTGTGTGCCTGT
AGCAATTCCGGTGTCAGCCCCCCGGGCGGCTCGCGAACAGAAGGCGGAGA
CTTAGACGGCGTGCGTGTCCCGGCCCCTGAGGTGGCGCTTGGTCGCAGTC
CATGGCGCCCCCGAGGTCTCTCCGCCTTGGCGCTGTCGCCGTCGCCGTCC
TGTCTGACCGCCCCCCCTCACCTCACTGTCTATCCCTCCCCCTCCCAACC
TCCGCCCCTCCCTCCGCCCCGGCCCAGCACGGGCGAGATCGGGGACGTGT
ACATCCCCCGGGACCACAACTCGGGCGACAACCGGGGCTTCGCCTTCGTG
CGCTACCACGAGAAGGAGGACGCGGAGCGGGCCCTGGAGAAAGTGGACGG
CACGGACTTCAAGGGCCGGGACCTCCGGGTATCCGTGGCCACTCGGAAAC
GACCCGACCACTTCCGCGACGGCGGGGGCGGGCACCGCGGGGGGGACGAG
GCGGCGGCCGCTACGGGTGAGGTGGTGGGGGAGGACAGGAGGGAGGGCGG
GCGGGAGGGAGGTCGGTCGCGGTGGCTGGTGCGGGTGAGAAGCCTCGAAA
CCCTGTCGCCGGCGCGACCGCTCTCATCCGGACGCTTCCGTGTCACCCGC
AGGGATGATAGGCGGGGCGGCTACGGGAGGGGCTACGGCGGGGGCTACGG
CGACCGAGACGGCGGCTACGGGGGCCGAGACGGCGGCTACGGGGGCCGAG
ACGGCGGCTACGGGGGCGGACGCGACCGATGTGAGTGCCTGGCGAAGCGT
GCCCTGCCTCCCTCCCCTCTCTCGTGACCTGTCGCTGCCCCTGATCCTCT
CCCTCTTCCCCGTCTACCCCCAGACGACGACCGCGACAGGCGGGGCGGCT
ACTACGGCGGCGGCGGCGGCGGATGTGAGTGCGCCCTTCCCCTTCCTCCT
TCCCTCTCTCCCTCCCTCCCCTTCCTCCTTCCCTCTCTCCCTCCCTCCCC
TCAACTCCCCCTCTTTACGCGTCAACCCGTCCTCCCCTCGTCCCGCAGAC
GGTGACAGGCGCGGGGGCTACTCGGACCGTGGCGGGCGCGACCGATGTGA
GTCCTCCCCGACCGCGTCGCATTCTCGGCCCGCTCTCTCTCATCTTCCCG
GTCGAGGAGACAGGCTCATGGCTCCCCTCTGTCCCGCCCCTCTAGCCCGC
CCTCCCTCCCGCCCTTATTTTTCCCCCTCCCCGCCCCCTCACGCCCTCCC
CTCTCTTCTACCCCCCTCCCTTCCCCTCTCCCCACCTTTCCCTCCCTCCC
CCTCCTCCCCGCCAGACGACGACCGCGGGGGCCGCGGCTACGGGGGAGGC
TACCCGGACCGACGGGACCGCTCTCGTTCCCCTCCTCGACGCAGATCCCG
CAGCCGCTCCCCGCCTCGCTACGACTAG back to topCoding sequence (CDS) from alignment at KK037255.1:245070..247347- >rna9720 ID=rna9720|Name=rna9720|organism=Nannochloropsis gaditana|type=CDS|length=2790bp|location=Sequence derived from alignment at KK037255.1:245070..247347- (Nannochloropsis gaditana)
ACGACGACCGCGGGGGCCGCGGCTACGGGGGAGGCTACCCGGACCGACGG
GACCGCTCTCGTTCCCCTCCTCGACGCAGATCCCGCAGCCGCTCCCCGCC
TCGCTACGACTAGACGACGACCGCGACAGGCGGGGCGGCTACTACGGCGG
CGGCGGCGGCGGATCACGGGCGAGATCGGGGACGTGTACATCCCCCGGGA
CCACAACTCGGGCGACAACCGGGGCTTCGCCTTCGTGCGCTACCACGAGA
AGGAGGACGCGGAGCGGGCCCTGGAGAAAGTGGACGGCACGGACTTCAAG
GGCCGGGACCTCCGGGTATCCGTGGCCACTCGGAAACGACCCGACCACTT
CCGCGACGGCGGGGGCGGGCACCGCGGGGGGGACGAGGCGGCGGCCGCTA
CGGACCCTCAAGATCGACAACATCCGCTACGACTGCACCACGGAGGACCT
GCGGGAGCTGTTCAAAGAATGGGTGACAATGGGGAAAACGGGGAGCCTAA
TCGCGACGGTGGTGGAGGGGCCGGAGGGCGCGGCCCCCCCAAAATCGACG
GCATGACGACGACGACCGCGGGGGCCGCGGCTACGGGGGAGGCTACCCGG
ACCGACGGGACCGCTCTCGTTCCCCTCCTCGACGCAGATCCCGCAGCCGC
TCCCCGCCTCGCTACGACTAGACGACGACCGCGACAGGCGGGGCGGCTAC
TACGGCGGCGGCGGCGGCGGATCACGGGCGAGATCGGGGACGTGTACATC
CCCCGGGACCACAACTCGGGCGACAACCGGGGCTTCGCCTTCGTGCGCTA
CCACGAGAAGGAGGACGCGGAGCGGGCCCTGGAGAAAGTGGACGGCACGG
ACTTCAAGGGCCGGGACCTCCGGGTATCCGTGGCCACTCGGAAACGACCC
GACCACTTCCGCGACGGCGGGGGCGGGCACCGCGGGGGGGACGAGGCGGC
GGCCGCTACGGACCCTCAAGATCGACAACATCCGCTACGACTGCACCACG
GAGGACCTGCGGGAGCTGTTCAAAGAATGGGTGACAATGGGGAAAACGGG
GAGCCTAATCGCGACGGTGGTGGAGGGGCCGGAGGGCGCGGCCCCCCCAA
AATCGACGGCATGACGACGACGACCGCGGGGGCCGCGGCTACGGGGGAGG
CTACCCGGACCGACGGGACCGCTCTCGTTCCCCTCCTCGACGCAGATCCC
GCAGCCGCTCCCCGCCTCGCTACGACTAGACGACGACCGCGACAGGCGGG
GCGGCTACTACGGCGGCGGCGGCGGCGGATCACGGGCGAGATCGGGGACG
TGTACATCCCCCGGGACCACAACTCGGGCGACAACCGGGGCTTCGCCTTC
GTGCGCTACCACGAGAAGGAGGACGCGGAGCGGGCCCTGGAGAAAGTGGA
CGGCACGGACTTCAAGGGCCGGGACCTCCGGGTATCCGTGGCCACTCGGA
AACGACCCGACCACTTCCGCGACGGCGGGGGCGGGCACCGCGGGGGGGAC
GAGGCGGCGGCCGCTACGGACCCTCAAGATCGACAACATCCGCTACGACT
GCACCACGGAGGACCTGCGGGAGCTGTTCAAAGAATGGGTGACAATGGGG
AAAACGGGGAGCCTAATCGCGACGGTGGTGGAGGGGCCGGAGGGCGCGGC
CCCCCCAAAATCGACGGCATGACGACGACGACCGCGGGGGCCGCGGCTAC
GGGGGAGGCTACCCGGACCGACGGGACCGCTCTCGTTCCCCTCCTCGACG
CAGATCCCGCAGCCGCTCCCCGCCTCGCTACGACTAGACGACGACCGCGA
CAGGCGGGGCGGCTACTACGGCGGCGGCGGCGGCGGATCACGGGCGAGAT
CGGGGACGTGTACATCCCCCGGGACCACAACTCGGGCGACAACCGGGGCT
TCGCCTTCGTGCGCTACCACGAGAAGGAGGACGCGGAGCGGGCCCTGGAG
AAAGTGGACGGCACGGACTTCAAGGGCCGGGACCTCCGGGTATCCGTGGC
CACTCGGAAACGACCCGACCACTTCCGCGACGGCGGGGGCGGGCACCGCG
GGGGGGACGAGGCGGCGGCCGCTACGGACCCTCAAGATCGACAACATCCG
CTACGACTGCACCACGGAGGACCTGCGGGAGCTGTTCAAAGAATGGGTGA
CAATGGGGAAAACGGGGAGCCTAATCGCGACGGTGGTGGAGGGGCCGGAG
GGCGCGGCCCCCCCAAAATCGACGGCATGACGACGACGACCGCGGGGGCC
GCGGCTACGGGGGAGGCTACCCGGACCGACGGGACCGCTCTCGTTCCCCT
CCTCGACGCAGATCCCGCAGCCGCTCCCCGCCTCGCTACGACTAGACGAC
GACCGCGACAGGCGGGGCGGCTACTACGGCGGCGGCGGCGGCGGATCACG
GGCGAGATCGGGGACGTGTACATCCCCCGGGACCACAACTCGGGCGACAA
CCGGGGCTTCGCCTTCGTGCGCTACCACGAGAAGGAGGACGCGGAGCGGG
CCCTGGAGAAAGTGGACGGCACGGACTTCAAGGGCCGGGACCTCCGGGTA
TCCGTGGCCACTCGGAAACGACCCGACCACTTCCGCGACGGCGGGGGCGG
GCACCGCGGGGGGGACGAGGCGGCGGCCGCTACGGACCCTCAAGATCGAC
AACATCCGCTACGACTGCACCACGGAGGACCTGCGGGAGCTGTTCAAAGA
ATGGGTGACAATGGGGAAAACGGGGAGCCTAATCGCGACGGTGGTGGAGG
GGCCGGAGGGCGCGGCCCCCCCAAAATCGACGGCATGACG back to top
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