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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100033g22.8431.mrna |
| Orig protein id | gnl|cribi|Naga_100033g22.8431 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:261255..262778 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna97 ID=rna97|Name=rna97|organism=Nannochloropsis gaditana|type=mRNA|length=1129bp
AGATCGAGCACAGTAGATACATTGGGTGCCTGTGAAGCCATGGCAAGTGA
GTTGAACGAGGAGGACATCCCAGCGTCAGCGGGGCCCACGAGCAAGCCTG
CCGAAGACGAGGCCTTGAGCATGGCAACTACAACAAAAAGTGATACAAAC
ACCTCAGCCGCGCTAATTTGCACGTTTCCTGCATCGATGAAGGCGGAGCT
CAAACGCCTCCTTCGTGCCTATCACCATTGCCTTGTCACCCGTCCAGTAC
TGACCAAGGCCCTGACCAGCGCCGTAATCTCCGCCCTGGGAGACATCTTA
GCCTCTTCCGGAAAAGGAGGCAGGGGACGGAGTGGTCGCCGGACCCTGGG
GTTCTTCCTTTTCGGAGGCCTGGTCACCGGGCCTCTGTGCCATTACTGGT
ACGGCCTGTTGGAGAAGAAGGTGCGGGGCTTGCAAGGCGGCAAGAACGTG
GCGATGAAGGTGCTGCTGGACAAGCTCCTCTTCACCCCTCCCTTCCTGGC
TCTGACCCTCTTCCTTCTCCGCTTGCTCGAGAGCGGGCGGCCGGGGGCGG
CTTGGCGAGGAATGAAGCAAGTCTATTTCCCCACCTTGAAGACGAATCTC
CAGGTGTGGACTGTGGCCCAGGCGATCAATTTCTCGTACGTATCCCCCGC
CTACCGGGTACTCTTCGGCAACCTGGTGGCCTTGTGGTGGAGCTTCTACT
TGTCCCGGCTGGGGGGGGGCGCGGGGGGGCGGGCCTCGTCGGTGGTATTG
ATGCGAAAAAGGTATTGAGGGGACAAGGAGAGGCCATGGGGTGAGAAGGA
CGATGGGGAAAGCGAGGCCTGCGTGCGTGCGCGGCGCCGCGGAGAGAGGG
GTTGAGAGGGGGAAGAGGTGGAGGAGAGCGATATGCAAGAGATGTACATT
CCGAAGGGGCGGAGACAAGGGGGGACCGGCATGAGGGTTGGGGATTGAGG
ACAGAGCAAGACGGCCGTGAAAGGGAGCATGGTCCTCCCTGTACAGGCTC
TCCCGCACTTTCCTGGTACGACGATGTACAAAAGCTAAGGTGCCGTCTTG
CTCGACAATTGTTTAGGACCAGCGAAGACGCACGGAGGACACGCATTGCT
GGAAGCGAAACAAAGCGTTGAAGATATCC back to topprotein sequence of rna97 >rna97-protein ID=rna97-protein|Name=rna97|organism=Nannochloropsis gaditana|type=polypeptide|length=405bp
MHLDLRPRIPYIGVSGVLKASVRSDLVWRLAALIYMPVFRGRHLKSGTRN
KSDVGKLSQQYTYLAGLFLWLTSPALASAFVSQFSSCSSIREAALPMIHS
PFSIRGDYHCTALNAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDL
AVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQG
ELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPS
LPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGGGGGGDVGVEE
VVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRA
PANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVV
HTFSW back to topmRNA from alignment at CM002455.1:261255..262778+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna97 ID=rna97|Name=rna97|organism=Nannochloropsis gaditana|type=mRNA|length=1524bp|location=Sequence derived from alignment at CM002455.1:261255..262778+ (Nannochloropsis gaditana)
ATGCATCTTGGTGAAAACTAAACGACACACTATGAAACAGGTTTTGTTCT
ACGTGTGTCGGATTTTTGGTTTTTCCGCCCAGATTTGCGGCCACGGATCC
CCTATATAGGAGTCTCCGGAGTGCTGAAAGCCAGCGTGAGGTCGGACCTC
GTGTGGCGCTTGGCAGCCTTAATATACATGCCTGTTTTCCGTGGCCGTCA
CCTGAAAAGTGGCACAAGAAATAAAAGCGATGTTGGAAAGCTGTCCCAGC
AGTACACCTACCTCGCGGGTCTATTTTTATGGTTaacttcccccgccctc
gcatCCGCTTTCGTATCCCaattctcctcctgctcatcCATCCGGGAAGC
CGCGCTCCCGATGAtccactctcccttctccatccgTGGTGACTACCATT
GTACCGCTCTTAATGCAGAACGGTCTGGGCCTACCTACTTTGAATGGCTT
GGTCGGCAAGCCGAATTGAAGCTTCGGCCGCAGCCGTATCAGGGTCTACG
CTTAAAGATCGAGAGGGATCTGGCTGTTTTACTCATGCGCTCCTCCTATG
AGGTTGCGGACGAATTAGATTTTGTACCTATGAACGATTTTCAAAAAGAC
TTTTTCACGTTTCGGCAGGTAAGTGTTTCAAAACACGTGATTGATGAGGT
CCCCTGCTCGTGCCCAGAGGCTCGTACAACATAAGCAGGGCGAAATTCTC
TTTGCGGCCCCATCCTTCGATACGATGCAAGTGTGGAAATGCAGAGTATA
GAGCACAGCAATATGTGAATAATGTGATAATGGCACATTGTCTTCAGACT
AATAGCACATGGCTTGAATTTTACCAACAAATACGTCACTTGTCAATTGT
AGGCAGAATGGGAAGACTACGTGGGggcattcccccctctctctgtgCGG
CAAGGGGAGTTAACGCAACCGTCCTACTTCGACTTCATTTCTTTCGCCCA
ATATTGCACCCTCAACGAGGAAATGCGGCATGGCAAGCTGGCCTTTGTCG
AGCTCGTCTCcgccgagggggagaaacgaGTAGTCCGGCGGTCGGATgat
ccttctcttccgcaAGACAATTCCTTGCTGCCGGCTGAACACTCAAGAAG
GGTGGGGGACAGGATTCTGCAGAGGCTTTTGGAAGCACCGGAGGTATACG
CGCCAAGATTatcagggagagggggcggaggaggaggggatgtaggggtg
gaggaggtcgtggaAGATGTCAAAAGAATCGTAGATTTGTTTACAGCAAA
ACAATTCAATCAAGGTGGCGAAGTCAAAATGCTcgcggagaaagaagggg
caagaaaagggggggcagcctGGCAAGGGATGAAGTTGAAGGTAACGAGC
AGGGCCCCAGCGAATCTGTGGAGCTTACAGTCTTTGATGTTCAGGAACGA
GCCGTTGCTGAATGACTTCGAAGGCAAGGCCGTTCGCGCTTACCTgcagg
gggtgggaaagaaagaagggacgtATGCAGTGCAGGTTCAGGGCAACGAT
GTGGTGCATACTTTCTCTTGGTGA back to topCoding sequence (CDS) from alignment at CM002455.1:261255..262778+ >rna97 ID=rna97|Name=rna97|organism=Nannochloropsis gaditana|type=CDS|length=3654bp|location=Sequence derived from alignment at CM002455.1:261255..262778+ (Nannochloropsis gaditana)
ATGCATCTTGATTTGCGGCCACGGATCCCCTATATAGGAGTCTCCGGAGT
GCTGAAAGCCAGCGTGAGGTCGGACCTCGTGTGGCGCTTGGCAGCCTTAA
TATACATGCCTGTTTTCCGTGGCCGTCACCTGAAAAGTGGCACAAGAAAT
AAAAGCGATGTTGGAAAGCTGTCCCAGCAGTACACCTACCTCGCGGGTCT
ATTTTTATGGTTaacttcccccgccctcgcatCCGCTTTCGTATCCCaat
tctcctcctgctcatcCATCCGGGAAGCCGCGCTCCCGATGAtccactct
cccttctccatccgTGGTGACTACCATTGTACCGCTCTTAATGCAGAACG
GTCTGGGCCTACCTACTTTGAATGGCTTGGTCGGCAAGCCGAATTGAAGC
TTCGGCCGCAGCCGTATCAGGGTCTACGCTTAAAGATCGAGAGGGATCTG
GCTGTTTTACTCATGCGCTCCTCCTATGAGGTTGCGGACGAATTAGATTT
TGTACCTATGAACGATTTTCAAAAAGACTTTTTCACGTTTCGGCAGGCAG
AATGGGAAGACTACGTGGGggcattcccccctctctctgtgCGGCAAGGG
GAGTTAACGCAACCGTCCTACTTCGACTTCATTTCTTTCGCCCAATATTG
CACCCTCAACGAGGAAATGCGGCATGGCAAGCTGGCCTTTGTCGAGCTCG
TCTCcgccgagggggagaaacgaGTAGTCCGGCGGTCGGATgatccttct
cttccgcaAGACAATTCCTTGCTGCCGGCTGAACACTCAAGAAGGGTGGG
GGACAGGATTCTGCAGAGGCTTTTGGAAGCACCGGAGGTATACGCGCCAA
GATTatcagggagagggggcggaggaggaggggatgtaggggtggaggag
gtcgtggaAGATGTCAAAAGAATCGTAGATTTGTTTACAGCAAAACAATT
CAATCAAGGTGGCGAAGTCAAAATGCTcgcggagaaagaaggggcaagaa
aagggggggcagcctGGCAAGGGATGAAGTTGAAGGTAACGAGCAGGGCC
CCAGCGAATCTGTGGAGCTTACAGTCTTTGATGTTCAGGAACGAGCCGTT
GCTGAATGACTTCGAAGGCAAGGCCGTTCGCGCTTACCTgcagggggtgg
gaaagaaagaagggacgtATGCAGTGCAGGTTCAGGGCAACGATGTGGTG
CATACTTTCTCTTGGTGAATGCATCTTGATTTGCGGCCACGGATCCCCTA
TATAGGAGTCTCCGGAGTGCTGAAAGCCAGCGTGAGGTCGGACCTCGTGT
GGCGCTTGGCAGCCTTAATATACATGCCTGTTTTCCGTGGCCGTCACCTG
AAAAGTGGCACAAGAAATAAAAGCGATGTTGGAAAGCTGTCCCAGCAGTA
CACCTACCTCGCGGGTCTATTTTTATGGTTaacttcccccgccctcgcat
CCGCTTTCGTATCCCaattctcctcctgctcatcCATCCGGGAAGCCGCG
CTCCCGATGAtccactctcccttctccatccgTGGTGACTACCATTGTAC
CGCTCTTAATGCAGAACGGTCTGGGCCTACCTACTTTGAATGGCTTGGTC
GGCAAGCCGAATTGAAGCTTCGGCCGCAGCCGTATCAGGGTCTACGCTTA
AAGATCGAGAGGGATCTGGCTGTTTTACTCATGCGCTCCTCCTATGAGGT
TGCGGACGAATTAGATTTTGTACCTATGAACGATTTTCAAAAAGACTTTT
TCACGTTTCGGCAGGCAGAATGGGAAGACTACGTGGGggcattcccccct
ctctctgtgCGGCAAGGGGAGTTAACGCAACCGTCCTACTTCGACTTCAT
TTCTTTCGCCCAATATTGCACCCTCAACGAGGAAATGCGGCATGGCAAGC
TGGCCTTTGTCGAGCTCGTCTCcgccgagggggagaaacgaGTAGTCCGG
CGGTCGGATgatccttctcttccgcaAGACAATTCCTTGCTGCCGGCTGA
ACACTCAAGAAGGGTGGGGGACAGGATTCTGCAGAGGCTTTTGGAAGCAC
CGGAGGTATACGCGCCAAGATTatcagggagagggggcggaggaggaggg
gatgtaggggtggaggaggtcgtggaAGATGTCAAAAGAATCGTAGATTT
GTTTACAGCAAAACAATTCAATCAAGGTGGCGAAGTCAAAATGCTcgcgg
agaaagaaggggcaagaaaagggggggcagcctGGCAAGGGATGAAGTTG
AAGGTAACGAGCAGGGCCCCAGCGAATCTGTGGAGCTTACAGTCTTTGAT
GTTCAGGAACGAGCCGTTGCTGAATGACTTCGAAGGCAAGGCCGTTCGCG
CTTACCTgcagggggtgggaaagaaagaagggacgtATGCAGTGCAGGTT
CAGGGCAACGATGTGGTGCATACTTTCTCTTGGTGAATGCATCTTGATTT
GCGGCCACGGATCCCCTATATAGGAGTCTCCGGAGTGCTGAAAGCCAGCG
TGAGGTCGGACCTCGTGTGGCGCTTGGCAGCCTTAATATACATGCCTGTT
TTCCGTGGCCGTCACCTGAAAAGTGGCACAAGAAATAAAAGCGATGTTGG
AAAGCTGTCCCAGCAGTACACCTACCTCGCGGGTCTATTTTTATGGTTaa
cttcccccgccctcgcatCCGCTTTCGTATCCCaattctcctcctgctca
tcCATCCGGGAAGCCGCGCTCCCGATGAtccactctcccttctccatccg
TGGTGACTACCATTGTACCGCTCTTAATGCAGAACGGTCTGGGCCTACCT
ACTTTGAATGGCTTGGTCGGCAAGCCGAATTGAAGCTTCGGCCGCAGCCG
TATCAGGGTCTACGCTTAAAGATCGAGAGGGATCTGGCTGTTTTACTCAT
GCGCTCCTCCTATGAGGTTGCGGACGAATTAGATTTTGTACCTATGAACG
ATTTTCAAAAAGACTTTTTCACGTTTCGGCAGGCAGAATGGGAAGACTAC
GTGGGggcattcccccctctctctgtgCGGCAAGGGGAGTTAACGCAACC
GTCCTACTTCGACTTCATTTCTTTCGCCCAATATTGCACCCTCAACGAGG
AAATGCGGCATGGCAAGCTGGCCTTTGTCGAGCTCGTCTCcgccgagggg
gagaaacgaGTAGTCCGGCGGTCGGATgatccttctcttccgcaAGACAA
TTCCTTGCTGCCGGCTGAACACTCAAGAAGGGTGGGGGACAGGATTCTGC
AGAGGCTTTTGGAAGCACCGGAGGTATACGCGCCAAGATTatcagggaga
gggggcggaggaggaggggatgtaggggtggaggaggtcgtggaAGATGT
CAAAAGAATCGTAGATTTGTTTACAGCAAAACAATTCAATCAAGGTGGCG
AAGTCAAAATGCTcgcggagaaagaaggggcaagaaaagggggggcagcc
tGGCAAGGGATGAAGTTGAAGGTAACGAGCAGGGCCCCAGCGAATCTGTG
GAGCTTACAGTCTTTGATGTTCAGGAACGAGCCGTTGCTGAATGACTTCG
AAGGCAAGGCCGTTCGCGCTTACCTgcagggggtgggaaagaaagaaggg
acgtATGCAGTGCAGGTTCAGGGCAACGATGTGGTGCATACTTTCTCTTG
GTGA back to top
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