EWM30592.1, cds97 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30592.1 vs. NCBI_GenBank
Match: gi|585113259|gb|EWM30592.1| (hypothetical protein Naga_100033g22 [Nannochloropsis gaditana]) HSP 1 Score: 833.558 bits (2152), Expect = 0.000e+0 Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0
Query: 1 MHLDLRPRIPYIGVSGVLKASVRSDLVWRLAALIYMPVFRGRHLKSGTRNKSDVGKLSQQYTYLAGLFLWLTSPALASAFVSQFSSCSSIREAALPMIHSPFSIRGDYHCTALNAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFSW 405
MHLDLRPRIPYIGVSGVLKASVRSDLVWRLAALIYMPVFRGRHLKSGTRNKSDVGKLSQQYTYLAGLFLWLTSPALASAFVSQFSSCSSIREAALPMIHSPFSIRGDYHCTALNAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFSW
Sbjct: 1 MHLDLRPRIPYIGVSGVLKASVRSDLVWRLAALIYMPVFRGRHLKSGTRNKSDVGKLSQQYTYLAGLFLWLTSPALASAFVSQFSSCSSIREAALPMIHSPFSIRGDYHCTALNAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFSW 405
BLAST of EWM30592.1 vs. NCBI_GenBank
Match: gi|553181356|ref|XP_005853550.1| (hypothetical protein NGA_0357402, partial [Nannochloropsis gaditana CCMP526] >gi|422295510|gb|EKU22809.1| hypothetical protein NGA_0357402, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 824.698 bits (2129), Expect = 0.000e+0 Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0
Query: 4 DLRPRIPYIGVSGVLKASVRSDLVWRLAALIYMPVFRGRHLKSGTRNKSDVGKLSQQYTYLAGLFLWLTSPALASAFVSQFSSCSSIREAALPMIHSPFSIRGDYHCTALNAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFSW 405
DLRPRIPYIGVSGVLKASVRSDLVWRLAALIYMPVFRGRHLKSGTRNKSDVGKLSQQYTYLAGLFLWLTSPALASAFVSQFSSCSSIREAALPMIHSPFSIRGDYHCTALNAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFSW
Sbjct: 16 DLRPRIPYIGVSGVLKASVRSDLVWRLAALIYMPVFRGRHLKSGTRNKSDVGKLSQQYTYLAGLFLWLTSPALASAFVSQFSSCSSIREAALPMIHSPFSIRGDYHCTALNAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFSW 417
BLAST of EWM30592.1 vs. NCBI_GenBank
Match: gi|873231814|emb|CEM07055.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 198.364 bits (503), Expect = 1.188e-56 Identity = 122/281 (43.42%), Postives = 162/281 (57.65%), Query Frame = 0
Query: 128 RQAELKLR-PQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGGG---GGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQ-GNDVVHTF 403
+QA +LR P P + R +I +D AV +MR SY VADELDFVPMNDFQKDFF +RQ EWE Y P+ + QG+L +YFDFISFAQY TL EM G+ FVE A GE+++VRR P+ DNSLLP+EHSRRVGDR+L L++ + SG+ VV +V++I +L T + + GE K+ E++ G +++ M + PA LW Q L R L ND+E K AY + G + TY + G+ VVHTF
Sbjct: 55 KQAADELRSPAPVKIPRTRINQDFAVQMMRQSYNVADELDFVPMNDFQKDFFLYRQNEWERYRERLKPMPITQGDLADANYFDFISFAQYLTLYTEMCSGQQLFVEKTGATGEEQLVRR---PAFLADNSLLPSEHSRRVGDRLLDFLIDR---FNTDESGKTCCIIRAAARPSPSFVVSNVQQIANLMTILGYAEKGEAKLTGERD---DGKFSFEMMLV-----LPATLWGQQVLSIRGAGLPNDYEAKIAMAYTRRCGYR-ATYRTSFEGGSSVVHTF 320
BLAST of EWM30592.1 vs. NCBI_GenBank
Match: gi|922868712|gb|KOO35024.1| (hypothetical protein Ctob_009999 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 184.111 bits (466), Expect = 4.036e-48 Identity = 117/277 (42.24%), Postives = 151/277 (54.51%), Query Frame = 0
Query: 131 ELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPE-VYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYA-VQVQGNDVVHTFSW 405
E +RP+ R ++E+D AVLLMR+SY VADELDF+PM++FQK+ F FRQ EW+ Y P V QG+LT P+YFDFISF QY ++ MR G++ F EL+ A G +V R+ P+LPQ N LLP HS RVGDR+L +LE + V P + +VE +R+ D+FT +F V LA GA G AW T APA LW Q L R + NDFE AV AYL+ G + + G V H W
Sbjct: 439 EASMRPKIRALPRRRLEQDFAVLLMRTSYAVADELDFMPMDEFQKEQFLFRQREWDTYREKLP---VMQGDLTDPAYFDFISFCQYASIASGMRRGRMIFEELIDANGTSVIVSRA--PTLPQRNELLPEAHSIRVGDRLLNWMLERYDGVLRPVIPPTSSALP---RAPVLVEGCQRVADIFTLNEFALTSTVTPLA--SGA---GVAW-------TLVAPATLWGAQVLQLRGDEPKNDFEVMAVLAYLRRCGVPATSITRFEKGGTQVTHEIRW 695
BLAST of EWM30592.1 vs. NCBI_GenBank
Match: gi|551582842|ref|XP_005776863.1| (hypothetical protein EMIHUDRAFT_238471 [Emiliania huxleyi CCMP1516] >gi|551585765|ref|XP_005778047.1| hypothetical protein EMIHUDRAFT_237380 [Emiliania huxleyi CCMP1516] >gi|485629043|gb|EOD24434.1| hypothetical protein EMIHUDRAFT_238471 [Emiliania huxleyi CCMP1516] >gi|485630401|gb|EOD25618.1| hypothetical protein EMIHUDRAFT_237380 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 174.481 bits (441), Expect = 2.907e-47 Identity = 103/260 (39.62%), Postives = 150/260 (57.69%), Query Frame = 0
Query: 146 IERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFSW 405
I+ D AVLLMR+SY ADELDF+PM++FQK F RQ +WE Y PP V+QG+++ P+YFDF+S+ QY T+ MR G++ F EL+ A G VV R DP+LP+DN+ LPA S RVGD+IL + E AP + R ++E VK + +F + + A E + +G ++++ APA +WS Q L R + L+NDFE KA+ AYL+ + +Y + +G++VVH F +
Sbjct: 125 IDIDFAVLLMRTSYATADELDFMPMDEFQKRQFLLRQDDWEGYRQPLPP--VKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVAR--DPALPRDNARLPALLSLRVGDKILDAIAERYPGLAPTVELRPSRAA-------LLEGVKALAQVFEYNNY------LLSARLEPSERG--------FQLSAIAPATVWSQQVLSLRGD-LVNDFEAKAIAAYLRRCA-VDASYTTRYEGSEVVHIFVY 357
BLAST of EWM30592.1 vs. NCBI_GenBank
Match: gi|551553664|ref|XP_005764128.1| (hypothetical protein EMIHUDRAFT_120287 [Emiliania huxleyi CCMP1516] >gi|485613713|gb|EOD11699.1| hypothetical protein EMIHUDRAFT_120287 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 175.637 bits (444), Expect = 4.793e-47 Identity = 103/260 (39.62%), Postives = 150/260 (57.69%), Query Frame = 0
Query: 146 IERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFSW 405
I+ D AVLLMR+SY ADELDF+PM++FQK F RQ +WE Y PP V+QG+++ P+YFDF+S+ QY T+ MR G++ F EL+ A G VV R DP+LP+DN+ LPA S RVGD+IL + E AP + R ++E VK + +F + + A E + +G ++++ APA +WS Q L R + L+NDFE KA+ AYL+ + +Y + +G++VVH F +
Sbjct: 180 IDIDFAVLLMRTSYATADELDFMPMDEFQKRQFLLRQDDWEGYRQPLPP--VKQGDISDPNYFDFMSYCQYATIAAGMRDGRVVFEELIDANGTSVVVAR--DPALPRDNARLPALLSLRVGDKILDAIAERYPGLAPTVELRPSRAA-------LLEGVKALAQVFEYNNY------LLSARLEPSERG--------FQLSAIAPATVWSQQVLSLRGD-LVNDFEAKAIAAYLRRCA-VDASYTTRYEGSEVVHIFVY 412
BLAST of EWM30592.1 vs. NCBI_GenBank
Match: gi|1210517851|dbj|GAX23252.1| (hypothetical protein FisN_21Hh064 [Fistulifera solaris]) HSP 1 Score: 165.236 bits (417), Expect = 7.159e-44 Identity = 110/289 (38.06%), Postives = 153/289 (52.94%), Query Frame = 0
Query: 126 LGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHG-KLAFVEL--------VSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGG-GGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFS 404
LG Q KLRP+P + LR K+ D AVLLMRSSY V DELD VPM+ FQ+DFF R AE+E YV P V QG+LT P YFDFISFAQY T+N + + + F E V E K +VRR DP++ D L +EH+ RVG +IL RL E++ S G G +EV+ +++ LF + G +AE + A G +T ++PA LW ++L F+ PL ND+ K A Q +G + + +++ +GN + +
Sbjct: 71 LGAQTLRKLRPKPPRILRQKLNLDFAVLLMRSSYAVTDELDIVPMDQFQRDFFLIRSAEYEPYVNDLGPGLVSQGDLTDPYYFDFISFAQYMTINRILTNDPPMVFEEQQAINKGDDVPNEFVKVIVRR--DPTITNDRLL--SEHNERVGKKILDRL---NEIFGDSPSSLPKFPSGSRPGADEVLASFSQLIKLFLINGYAFDG----VAEVKKASTIPGTASGATFSLTLQSPATLWGGKALAFQKSPLPNDYLLKTSIALAQDLGYRVVSSSLKYEGNSEISLLT 348
BLAST of EWM30592.1 vs. NCBI_GenBank
Match: gi|1210514488|dbj|GAX26597.1| (hypothetical protein FisN_21Lh064 [Fistulifera solaris]) HSP 1 Score: 162.54 bits (410), Expect = 9.851e-43 Identity = 108/294 (36.73%), Postives = 153/294 (52.04%), Query Frame = 0
Query: 126 LGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVEL---------VSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLE----APEVYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAK--QFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGNDVVHTFS 404
LG Q + RP+P + LR K+ D AV LMRSSY V DELD VPM+ FQ+DFF R AE+E YV P V QG+LT P YFDFISFAQY T+N + + E V E K +VRR DPS+ D L +EH+ RVG +IL +L E +P L+G G +E++ + +++ LF F+ EVK+ + G+ G +T ++PA LW ++L F+ PL ND+ K A Q +G + + +V+ +GN + +
Sbjct: 71 LGAQTLRRFRPKPPRILRQKLNLDFAVSLMRSSYAVTDELDIVPMDQFQRDFFLIRSAEYEPYVNDLGPGLVSQGDLTDPYYFDFISFAQYLTINRILINDPPVVFEEQQAINKGDDVPNEFVKVIVRR--DPSITNDRLL--SEHNERVGKKILDKLNETFGDSPSSLPKFLNGSRPGA------DEIMASLSQLIKLFLINGYAFDGVAEVKIASAIPGSASGAT------FSLTLQSPATLWGGKALAFQKSPLRNDYLLKTSIALAQDLGYRVVSSSVKYEGNSEISLLT 348
BLAST of EWM30592.1 vs. NCBI_GenBank
Match: gi|224001312|ref|XP_002290328.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973750|gb|EED92080.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 160.614 bits (405), Expect = 2.473e-39 Identity = 114/323 (35.29%), Postives = 161/323 (49.85%), Query Frame = 0
Query: 70 WLTSPALASAFVSQFSSCSSIREAALPMIHSPFSIRGDYHCTALNAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVE---LVSAEGEKR-----VVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEAPEVYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVG 384
WL+ ++SA + SI AA P+ TA A+ + + E LRP+P + LR ++ D AVLLMRSSY D +D V M+ FQ+DFF RQAE+ Y A P +++QG+L P+YFDFISFAQY T+N E+ + F E + EGE + VV+R DP+L N LP +H+ VGD IL LLE A + D V+ + +K++V+LF F G ++ + K G + +T +PA LWS QSL +N L+NDF K +A +Q G
Sbjct: 52 WLS--CMSSASTTSILLAQSIANAAPPL-------------TAEEADNTSARF--------ERALRPKPPKVLRPRMNLDFAVLLMRSSYNAVDTIDIVAMDQFQRDFFLIRQAEYLPYANALGPGAMQQGDLADPNYFDFISFAQYSTINREINNPPAVFEEQQPVEVGEGEPQQFVSVVVKR--DPTL--SNKDLPVKHAEIVGDAILDTLLEKFGGTASAIPKIESSSRPD--VDTLFASIKQVVNLFVVSGFAWDGNASIVQ----SGKSGTDASETQFAITFTSPATLWSGQSLKAKNAVLMNDFALKTAKALIQRAG 341
BLAST of EWM30592.1 vs. NCBI_GenBank
Match: gi|1072223093|gb|OEU07850.1| (hypothetical protein FRACYDRAFT_197207 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 151.369 bits (381), Expect = 6.106e-39 Identity = 99/284 (34.86%), Postives = 144/284 (50.70%), Query Frame = 0
Query: 133 KLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFV------------ELVSAEGEKR----VVRRSDDPSLPQDNSLLPAEHSRRVGDRILQRLLEA---PEVYAPRLSGRGGGGGGDVGVEEVVEDVKRIVDLFTAKQFNQGGEVKMLAEKEGARKGGAAWQGMKLKVTSRAPANLWSLQSLMFRNEPLLNDFEGKAVRAYLQGVGKKEGTYAVQVQGN 397
K RP+P + LR K+ +D AVLLMRSSY DE+D + M+ FQ+DFF R AE++ Y V+QG+LT P YFDFIS+AQY T+N + + L E ++G R VV+R DP+L N +L HS++VG IL +L E + P + R G +G +++IV LF + GEV + + RKGG + K +T AP LWS ++L +PL NDF K + Y++ G +++ G+
Sbjct: 29 KFRPKPPKVLRRKLSQDFAVLLMRSSYNALDEMDCIAMDQFQRDFFLIRVAEYQIYTNNLGAGMVQQGDLTDPYYFDFISYAQYKTINRAVTNDPLVVFEEQQVPPEGSSEEKTDSKGNARFIPVVVKR--DPNLT--NKMLIPTHSKKVGSTILDKLEETFGKTDSKIPNVGNRPDSGTLLLG-------IRQIVTLFLISGYAFKGEVVVESNDGDTRKGGKSLFA-KYVITLDAPVTLWSGKALQLEGDPLDNDFTSKTITEYIRRSGYNNIKSSIKFDGS 300 The following BLAST results are available for this feature:
BLAST of EWM30592.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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