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Properties
| Property Name | Value |
|---|
| Product | glyceraldehyde-3-phosphate dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100081g16.754.mrna |
| Orig protein id | gnl|cribi|Naga_100081g16.754 |
| Gene | GapC1 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037255.1 | supercontig | KK037255.1:187288..189838 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9699 ID=rna9699|Name=rna9699|organism=Nannochloropsis gaditana|type=mRNA|length=3974bp
TTGTCAACAGGAGGGCCTCTTTTCTAAATTTCTCATCGAAGCAATTCAGG
GCGTCTTCCACCGACTGCAAAAACGCGTCTTGACCCGCACACTTAATCAT
CAGTTGAAGGACATTTTTCATTCCACCTCAAGGCTGTGCATCGCCGCCGG
TCTGGCCTTGGAATGGCATAGGAAGCAGAGGTGAAAGAGATCTCGACGTC
GGCATCCCATCTCTCCAGATCAAGGTCCTGAACGACCCTCTCTTTTAGCG
TTGTTCCCATGGCGTCATCCGACCCAGTGCCGGCTGACGACGTGATGAAG
GAGGCCGCTGCCCTTCAAGAGGAGGTTGCGCTGCCGCCAGAGCTGGTGGT
TGACTCTGACCTCGAGGTAGCGGAGGCAGCAGCAGCGGCAGCGGACGAGG
TTTTAAGAGGGGGAGGGGGAGGAGGGGGGGGGGCGACAGGCGGGGCCAGT
CTAATCAGTGGTGCATCGCCGAGGAGTTTGGGGGCGGAGGAGCTGCTGAA
GGCCGTCGCGGACGAGGCCCAGGTCACGAAGCGCGGCAAGACGCCGAATG
AGGTCATGTCCCTCCAGGAGCAAGCCATCCTGGCCAACATTCAGGAGCTT
CAGCGCCAGCTCTGGAAGGTGAAGAGCGAGCAGGAGAAGCGGGACACGGG
CGAGGAGAACGGTGCCGCGGGGGAGGCGTCGGAAAGCGTGGCAAAGCACC
GCGTGATAATCGTCGCCAACCGCCTGCCGGTGTCGGGCGGGCGGGACGAG
AAGACCGGGGAGTGGGACTTTCGGATGTCCTCGGGTGGGCTGGTTACGGC
CTTGAAGGGGTCGCGGGAGGAGTTGAACGCGGTGTGGATCGGTTGGTTGG
GGCAGGAGATACCAGAGGAGGACCGGGAGCAGGTGCGGGAGAAGCTTCTG
CGCGAGTACAACGCGGTGCCCGTCTTCCTCTCGGACGAGCTGGTCAACAA
GTACTACAACGGCTTCTCCAACGACGTGCTCTGGCCCCTTTTCCACTACA
TGCCCCTGCCCATTTACCAGTCCGAGGCGGGCTCCGACAAGCGCTTCGAC
ACGGTGCTGTGGGACGCGTACAGGGAGGCGAACGTGCTCTTCGCCGACGC
GGTGGCGGCGATTTGGGTCGAGTCCGACTACATCTGGGTCCACGACTACC
ACCTCATGTGGCTGCCCCTGGAACTTCGACAGCGCTTCAAGCACGCCAAC
ATCGGCTGGTTCCTGCACACACCCTTCCCCTCCTCGGAGATCTACCGCAT
CCTCCCCGTGCGCAAGCCCCTCTTGGAGGCCCTCCTGGCCTCGGACCTGC
TCGGCTTTCACACCTACGACTACGCCCGCCACTTCCTCTCGGCCTGCGCC
CGTGTCCTGGAGGTGGACACCACCCCGCGGGGCCTGGAGTACGCCTCGCA
CTTCATGTCCCTGGGCGTCTTCCCCATTGGGATCGACCCGGAGCACATCG
CCCACATCCTCCAGCGGCCCGCGGTCCACGCGCGCATCGCGGAACTCACG
GAAACCTTCGCGGGTCGAAAGGTGCTGCTGGGAGTCGACCGGCTGGACTA
CATCAAGGGCATGCCGCACAAGCTGCTGGCGCTGGAGCTGTTCCTGACGC
GGCACCCGGAGTGGCGCGGGAAGGTGACGCTTATCCAGGTGGGAGTGCCC
TCGCGGACCGAAGTACCAGAGTACCAGCGGCTGTCGGAGCGCGTGAACGA
GCTGGTGGGCAGGATTAACGGGACCTTCGGGAACCTGGAGTACGCCCCGG
TGCACTACATCAACCAGAGCATCACGCAGGAGGAGCTGGTGGCGATCTAC
AACATGGCCGACGTGTGCCTGGTCACTTCTCTGCGGGACGGAATGAACCT
GGTCTCGTACGAATTCGTGGCCGCGCAGAGAGACATGCCGGGCGTGCACC
AGAAGGACGGGCCGGGTGTCTTGGTCCTCAGCGAGTTTGCGGGCAGCGCG
CAGTCTCTGAGCGGGGCTATCCGCATCAACCCCTGGAACACAGAGGAGGT
CTGCCACGCCATCCAGCAGGCACTCACACTTTCACGGGCGGAGCGGGAGA
TCCGGCAGCACAAGCTCTCCCGCTACGTCTCCGTGAACACGGCCTCCTCC
TGGGCCAAGTCCTTCGTCGCGGAGCTGCGCACGGTCTGCGCCAACAAGCC
GAACCTGTCCAAGCTCCCGCGCCTGCCGTTCGACCTCGCCCGCTCTGCTT
ACGAGCGGGCCAGGAACCGGCTCATCGTCGCGGACTACGACGGCACCCTC
ACTCAGCTCCAGTCCGTCCCGCAGCTCGCCACCCCGTCGCCCTACATCAC
CAACCTGCTGGACTCCCTGAGCAAGGACCCGCGCAACACGGTGGTGATCG
TGTCAGGCCGGGAGAAGCGCTTCATGGACACGTGGCTGGGCAAGCTGAAG
ATGGCCTTGGCGGCCGAGTACGGCTTCTACTACCGGATGCCGGAGGAGGA
GGAGTGGCAGACCATGGCGCCGGAGGTAGACACGTCTTGGCGGGACATCG
TTCGGCCCATCCTCGAGTACTTTACGGAGCGCACGCCGGGCACGTACATC
GAGAAGAAGGAGTCGAGTCTGACCTGGCACTACCGGGACGCGGATCCGAA
TTTCGGCTCCTGGCAAGCCAAGGACATGCAGATCCAGCTGGAAGACGTGC
TCTCGAACCTGCCGCTGGAGATCATCCAGGGGAATCGGATGGTGGAGGTG
AGGCACCAGGGCGCCAGCAAGGGGATGGTGGTGGAAAGCGTCCTCCGGTA
CATGGCGGACCCGTCCCGGGGGGCGAAGAACTCGGACACGCCCCTCGACT
TTGTATTCTGCGTGGGCGACGACCGGACCGACGAGGACATGTTCCAGGTC
CTGAAGATTTTGCGGGGGGAAGCGGCGCGTTTCACGGCCCCTTCCTCGGT
AGGCGGGTCGCACCCTCTCTCGCACGGCGGCCTTACCCCCTTCTCCTCCC
ACGTGGGACCCGACCTCATCCCCTTGGACTCGATCCCGGGGGGCGGGCAG
CCAGAGCTGCGGCCCTCGAGTGCAACTCCACGGAGCGTGTCGACGCCCAC
GGCCGGGGACGGGCTCGGGCGGGAGTCGGCGTCGAACAGCGCGTTCACCG
AGTCGCGCCCGAACCCGTCGGGGATGGAGCAGTCACAAGACGCGCAGCAG
AAACCCCCTGTCATTGGGGAGCCGTGCCGAAGGCAAGAGGATTCCCACGC
GGAGAAGAAGGGCGGGAGGGAGATGTGTGAGGGCGGGCTGGAGAGAGGAG
ATCTCGCGAGCCCGAGCCTCGGCCCCCAGATGGACCACCTGACGCTGGAG
GACGAGGCTGTCACGGAGAATGCGCTGATGCTGAGCAGCAGGCCCTGCAC
CCCGAAGGGGGGGGTGAGCACTGGGATAGGGCGGGACATGCCGCTGATGG
CCCGGGACGCGAAAGTCTTCACCGTGCATGTGGGAAACACGTACAGTCAG
GCCGAGTACCATGTTGAGAGCTTGCTGGATGTGCGCCGCCTGCTCCGAGA
TTTTGCCTCCATCAGCTTTCGACAGACGACGCGGAGGTGAGAGAGACCGG
AAGCTGTCAGCAGCTACGAGAAGGGGACAGCACTCTTTCTGCAGCAAGAT
GGTAATATGCCCACGGCCGCTGCATGACTAAGATAGTGCTCCCGTTGCGA
ACCGAGGGCTGCGATTTTGGGGCTTCCACTCGATATCGCGAGGATCTTCA
TTCATAATCAGACATTTGACTAGGGGAGAAAGTTTGGGGAGGATAAATAG
ATCACTCTTCACATACCATTAATATGTTAATAGAAACATGCTTGGGGGGG
GGGGGAGGGGGGTTGAGGAAAAGGTCTATACATTTTGCTCAGTTTAGGGC
TTGTAGTGGGAACGACCAATACGTAATTACCACCCGCGGTGGCATGTGTG
AGGTAAGTGGCAAAGCGTCGATGGTCGAGGAATGTTGTAGGGGAAAGTAA
AAGACGATTTTGAGAGCTTTGTGC back to topprotein sequence of rna9699 >rna9699-protein ID=rna9699-protein|Name=rna9699|organism=Nannochloropsis gaditana|type=polypeptide|length=377bp
MAPVQSTLIGALALAGSASAFVTPSFKLNAVQHARTNDVHMAVPMGINGF
GRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDV
EGDDIIIDGHRIKTTHTRKPEEIGWGKLGASYLCESTGAFLTKDTCQVHL
DGGAKKVVMSAPAKDDSQVIVMGVNEVDYKGADILSCASCTTNGLAPIVK
VVNDEFGIEEALMTTVHSFTATQMVVDGSSKKDWRGGRAASVNIIPSSTG
AAKAVTKVIPSLKGKLTGMAFRVPTPDVSVVDLTARLSKPTTYEAICAAI
KKASETTHKGVIGYTELPMVSQDFVSDPRSTIFDAGAGIALNPQFVKLVA
WYDNEWGYSCRVVDLIKMVAKQDGVSL back to topmRNA from alignment at KK037255.1:187288..189838+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9699 ID=rna9699|Name=rna9699|organism=Nannochloropsis gaditana|type=mRNA|length=2551bp|location=Sequence derived from alignment at KK037255.1:187288..189838+ (Nannochloropsis gaditana)
CCCTGATGTTGCTTTGCGTCTGACCAGACGGAGATCTTTGCTTTATCATA
TCTGAGCTGGTCTTGCATTTAATAGCAAAGTGGCGATGCGCATCACTTCT
TCATTGTTTCTCTCCCACGACCTTCTCTGGAAGTTCATCTTGTTCTTGCA
CAAGATCCTCCGTCTCCAAAAAGCGTTGTTCGGCTTGCGTGTCGGAAGCT
GCGCTTACAAGACCCAATCTTCTTGTTGTTAGAAGTATACTTTTCGAAAT
AATTCGCGGTGTATGGACGCACTCCCTGCATCTGAAAAGCTTGTTTGAAG
CCCGTCAACCTTCATGGTATCTTTTCACCCTTACGTTACCTGCCGAGCGC
AACGTTCACACGACGGCTTTGTGTGGTGAGTGGCTGCTGCAACGCGACAG
TAATGTCCAGATCTTTTATTCTTATTTTACCTTCCCCTCTTGCGTAAGAA
CGGGCTTGGCCCCTGTGTGCACAATACAACCTCTTCTCTGAGAAGCATTG
TTTGTGTCAGATGAATTGGAAAAATGCATGCCGATCTTTGGCGGTCGATG
CATTGGGCACagatgcaggaggaaagattgCTCTTGATGAAAGGAGATTG
GGATTTGACACGGGCCAGACATTCTGACCCGACACGGTTACTCCTTGACT
TGCACGCGCATTGCGATGCGTATTTTAACGGCACTGCtatttcctctcct
tgcctgctcTGCCACGTTGACAGCTTACTTTTCACGCTCAGCATTTAAGA
TGGCCCCCGTGCAATCCACCCTCATCGGTgccctggccctggccggctcc
gcctccgccttcgtgactccctccttcaagctcAACGCGGTGCAGCACGC
ACGCACCAACGACGTGCACATGGCGGTCCCCATGGGCATCAACGGCTTCG
GACGCATTGGTCGCTTGGTGGCTCGCATTGCCGTCAAGGACCCGCAGTGC
AACCTTGTCGCCATCAACACGGGCGCCGACGCCGAGTACATGGCATACCA
GTTCAAGTACGACTCCGTGCACGGGCGCTTCGACGGgaaggtggacgtgg
agggcgacgacaTCATCATCGACGGCCACCGCATCAAGACCACCCACACT
CGCAAGCCCGAGGAGATCGGCTGGGGCAAGCTGGGCGCCAGCTACCTGTG
CGAGTCCACGGGGGCCTTTTTGACTAAGGACACGTGCCAGGTGCATCTGG
ATGGCGGCGCCAAGAAGGTGGTCATGTCCGCGCCGGCCAAGGACGACTCC
CAGGTCATTGTCATGGGCGTGAACGAGGTCGACTACAAGGGTGCGGATAT
CCTgtcctgcgcctcctgcaCGACCAACGGCCTTGCTCCCATCGTCAAGG
TTGTCAACGACGAGTTCGGCATCGAGGAGGCACTCATGACCACCGTGCAC
TCCTTCACGGCCACCCAGATGGTTGTGGACGGCTCCTCCAAGAAGGACTG
GCGCGGCGGACGTGCGGCCTCGGTCAAcatcattccctcctccaccggcg
ccgccaaggccgtgACCAAggtcatcccctcccttaAGGGCAAGCTCACC
GGCATGGCCTTTCGCGTGCCCACGCCCGACGTGTCCGTGGTTGACCTCAC
GGCCCGTCTCTCCAAGCCCACAACCTACGAGGCCATCTGCGCGGCCATCA
AGAAGGCCTCCGAGACCACCCACAAGGGCGTGATCGGCTACACGGAACTC
CCCATGGTCTCCCAGGACTTTGTGTCCGACCCGCGCTCCACCATCTTCGA
CGCAGGCGCCGGCATTGCTCTCAACCCGCAGTTTGTGAAGCTTGTGGCCT
GGTACGACAACGAGTGGGGGTACTCTTGCCGCGTCGTCGACCTGATCAAG
ATGGTCGCCAAGCAAGACGGCGTCTCGCTCTAAGCTACTAAGCGCACGCT
GCCCGCCTGGCATTAGGATTGGGCAGCAGCATTTCAGCTCGGGCAATATG
CTATCCTTATATATGTGCGGTGTAGCTGGTGTGTCAAGAGGATTCTAAGC
TTCAAGCCTTGAGGCCTCGGACGCGCACTGCGGCCCGCCCTTGTATTTGT
CCTGCTCAATAGTTCGCTTGGTCGTTTTATGCTGTCTGTCCCCGGCCTGA
CAGTTCGTGATGTTGTCGTGAAAGAGCGTTTCTCTGTGTGGTTCCCGGTG
ACGTGCGATTTTGTGGAAGGATGAGAAAACGTCTGATATCGAAGAGCAGA
CGCAcgaagaaaatgaaagatTTCTGATGGACAgccaggggagagaaagc
caTCGCCAAGGGCGTGGCGCTCGTCTTCCCCAAAGCTACTCCTGCGGCTT
CGTGATGTGTCCCGTAACGTGATATCTTCTTTTTTCAATCTCCGTTCTGT
GCAATTCATGCTCCTGACCTCAGGCATGGGATGCAAAAATCATCATATCC
GTATCCGTTCACTGGCAAAACTTCCGACCGCAATACCTCGCAATTCATCT
AaccgtccttccccgcaATATATGTATGGAAAAAATTTGAACTCTTCCTT
CACTGCGTGCATCATAGTGCTTGTAAAAGCCACCTCCGGACGAGACAAGT
C back to topCoding sequence (CDS) from alignment at KK037255.1:187288..189838+ >rna9699 ID=rna9699|Name=rna9699|organism=Nannochloropsis gaditana|type=CDS|length=1134bp|location=Sequence derived from alignment at KK037255.1:187288..189838+ (Nannochloropsis gaditana)
ATGGCCCCCGTGCAATCCACCCTCATCGGTgccctggccctggccggctc
cgcctccgccttcgtgactccctccttcaagctcAACGCGGTGCAGCACG
CACGCACCAACGACGTGCACATGGCGGTCCCCATGGGCATCAACGGCTTC
GGACGCATTGGTCGCTTGGTGGCTCGCATTGCCGTCAAGGACCCGCAGTG
CAACCTTGTCGCCATCAACACGGGCGCCGACGCCGAGTACATGGCATACC
AGTTCAAGTACGACTCCGTGCACGGGCGCTTCGACGGgaaggtggacgtg
gagggcgacgacaTCATCATCGACGGCCACCGCATCAAGACCACCCACAC
TCGCAAGCCCGAGGAGATCGGCTGGGGCAAGCTGGGCGCCAGCTACCTGT
GCGAGTCCACGGGGGCCTTTTTGACTAAGGACACGTGCCAGGTGCATCTG
GATGGCGGCGCCAAGAAGGTGGTCATGTCCGCGCCGGCCAAGGACGACTC
CCAGGTCATTGTCATGGGCGTGAACGAGGTCGACTACAAGGGTGCGGATA
TCCTgtcctgcgcctcctgcaCGACCAACGGCCTTGCTCCCATCGTCAAG
GTTGTCAACGACGAGTTCGGCATCGAGGAGGCACTCATGACCACCGTGCA
CTCCTTCACGGCCACCCAGATGGTTGTGGACGGCTCCTCCAAGAAGGACT
GGCGCGGCGGACGTGCGGCCTCGGTCAAcatcattccctcctccaccggc
gccgccaaggccgtgACCAAggtcatcccctcccttaAGGGCAAGCTCAC
CGGCATGGCCTTTCGCGTGCCCACGCCCGACGTGTCCGTGGTTGACCTCA
CGGCCCGTCTCTCCAAGCCCACAACCTACGAGGCCATCTGCGCGGCCATC
AAGAAGGCCTCCGAGACCACCCACAAGGGCGTGATCGGCTACACGGAACT
CCCCATGGTCTCCCAGGACTTTGTGTCCGACCCGCGCTCCACCATCTTCG
ACGCAGGCGCCGGCATTGCTCTCAACCCGCAGTTTGTGAAGCTTGTGGCC
TGGTACGACAACGAGTGGGGGTACTCTTGCCGCGTCGTCGACCTGATCAA
GATGGTCGCCAAGCAAGACGGCGTCTCGCTCTAA back to top
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