rna9695, rna9695 (mRNA) Nannochloropsis gaditana

Overview
Namerna9695
Unique Namerna9695
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2034
Alignment locationKK037255.1:179906..180893 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100081g12.752.mrna
Orig protein idgnl|cribi|Naga_100081g12.752
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:179906..180893 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100081g12gene9416Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9695rna9695-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21005.1cds9664Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9695 ID=rna9695|Name=rna9695|organism=Nannochloropsis gaditana|type=mRNA|length=2034bp
TTGAAATAGCGACCCATTACCTTCATATATTACCCACAGATCGAGGGGCC
GGACGGGCATGGGAGGAAAGGAGACCCCAGAGAAGGTGACGTCACTGAAA
GCGCGGACCGTTTCTGTCCCTGAACATAGTGCTCCTAAACTTTGCTGCGT
CAAAACATGATTTTATAATTTTACCGACGTATCTGGAAGAAGGATCCAAC
CGGGTTGGGGGAGAAGATGCCGTCCGTGTTGTCCACAGGTTTGCCAAGGG
CCGCGTTTATTTCTGCATTCTCCCAAGCACACTGACAAGCCCCTGAATCC
GATCGTAAAACTTAGGATTCGATGACAATGACACCTCTATGTCTCTTCCC
CCTCAAGGAAGAGACTGTCTTTATGGGAGTTGTAATAGGTGTGGGGGCCA
CTATCATCTTCTTTCCCCTTCTCCTACGGTTTCCCCCAATTCTGCGGAAA
CTTCGTACACTTCATACCACGCCTTTATCGGACGTGCCCGGCTGCCCAGA
GCACTACGACGAAGCCTTCACTTCAGCTCTTTTTACCCTTCCGGACCCAA
ACAACTACCTCTCTGTGTACAGCTATCTTCCCCTTGACGAGGGCATCCGT
TTCCGACATCCAAGGATGCCCGTTTGTCGCTACTTCTCGCTCTCTCTGTA
CGCTGGCCTCTTCGACCCCGTGCAAGACCAGGTCCCGCCCAGCCTCTGCG
ACATGGACCTCGTCTACAATCTGGATGGGAGCTTCGATGTAGCCATTTGT
GATGAGGAAGAGAGGCCGGCAGACATCTCCCCGGCGAACTGGCTGCCGCG
ACACGGAGTCCGCGACGCCTTGCTGGTGGTGAGGAGGTACGGGACTCTGC
CTGGACAGCGCCTCGACATGCCCTCCTTCCACTCTATGGGCCCTGGCACG
CCCAAAGAGCTTAAACCCGCCCACCACAGCTTTTCTGGGCCTCATTACGC
GGAGAAAGCGCCCTCGCACCGCTTCCAGCGGCTTCTGCGCCTCCTCGCCT
ACCTCGGGGCCGTGGCTTGTGCCTTACTCCTGGCGGGCAGGTGGTCGGCG
GCGGAGATAACCGCGATGCTGCTGGTAGCTGGGGCTATGCCGGCCATTCT
CTTGCGTCTGTTGTATGCGAGGGGTCGGAGGAAGGCGAAGAGGGTCTTGT
CAGACAGGGCGTACAAGGTCAACGAGTTCACAGACCCGCCGGAGGCCCGG
GTCTACGACGCGGACTCGCCCAAGGCCCATCCCAACCACAAGTACTACTC
CTGCCCCTTTGACGCCCGCCAAGGCGACCTGCTTATCATCGGCCGGATCT
TCCCGGGAAAGCAGAGGATGTGGACCTTTGTCGTGTACGACGAGTGCGGC
CTGCCGCAGTACCAGCACTTCACGGACGAGACGCTCCGGACCTCGCCTGG
CGCCAAGTCTCACCTTCCCGGGGCCAGACGAAGGAGGGAAGGAACGGAGG
AGCCGCGGGCCCTGGACGCGGGGAGGGAGCAGGCGGGGCTGGCGTATCGC
TTGGTCCTGACGACGGACATGCGCCGCCACTCGGGCAGGGAGGAGAACGT
GGTTGACGTGTCCAGGATCCCGCAGGGACTGGTCTTGCTCCGCCTCATAT
ACCCCGAGACCAGGGAGGTGTTCGAGCGCAGCAAGCCGAGCGTGACGGTA
CTCTGTACGGAGGATGCGAGAGGGCACCGGAAACAGGCTTAGGGTAAGGG
GTGACACAAGGCCCCCCAAGCCCTCGAGGGCGACCCGGGTCCTGTCCAAA
AAGACGTGAGGCAGCTGCCTTACAGCTGAGAAAGGGAAATTCGTCCGTAT
CGCCGAAAGGTTCGGGGCTAAGCAATGTTCAGATCGAGCATGAGCCGGCA
GAGAAGCTATGTATGGCGTGAGAGCTCTCATGAGAAGTCCCTTAGCCATG
CTAGGGGAGACTTCTTCAGCACTGAACCAATCGAGTAAACAGACAAACCG
CTCTTTTCCAAGGCATTGATTATTTGTTATAAATGGATGATTTGGTTGTT
TCCTTCAATGGCTGCACAGTCCCGTGTTTGACCG
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protein sequence of rna9695

>rna9695-protein ID=rna9695-protein|Name=rna9695|organism=Nannochloropsis gaditana|type=polypeptide|length=133bp
MALPSAHAATLKNVAGKSSVQLYRDCLRVADHIASKSPKGIALRKMLRSE
FKKNAAVDDAKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKTTSDM
IKQCMNNAKRERERKEKAERGEGAELEHFHVKI
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mRNA from alignment at KK037255.1:179906..180893-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9695 ID=rna9695|Name=rna9695|organism=Nannochloropsis gaditana|type=mRNA|length=988bp|location=Sequence derived from alignment at KK037255.1:179906..180893- (Nannochloropsis gaditana)
GACGGCAGACTCTCAGTCCCGCTCAAAATCCTTCATTCCTTGTGTGCCAT
TCCTGCTCAATCAGGCCTTGGGTACGCGCGAATCTGAGAACAAAGTACGT
CGAGGATGGCTTTGCCGTCGGCACACGCAGCAACGCTCAAGAACGTTGCT
GGAAAAAGCAGTGTCCAGGTGAGGTTAGGAAAGAAGGGTAACGCCGTCAC
AAATGCCACCCCGCTGACCCAGCACAAAGCTCACAGCTAGTATATTATAA
TTCGCAAAAAATAGTTGTACCGAGATTGTCTCCGCGTCGCCGACCACATT
GCCAGTAAGGTAAGCAATCCATTGCCTGCCCGTGCTCAGCCTGAAGCATG
ACGAGATTCCCACCCCTACAAATCGCCTTGCATCAGAGCCCGAAAGGAAT
TGCACTCAGGAAGATGCTTCGCTCTGAGTTCAAAAAGAATGCCGCGGTGG
ATGATGCCAAGCAAGTGGAACAGCTAAAGATGAAGTAAGAATGGCTTGCG
AGGTCCCGCGGGCGGAGCAGAGGCAATCAATAAAATGAAAAGGGCAAATG
GAACCTGCCCACCAGGTTTCTGACACGCACCCCTTTTCTATTTACATATA
TAGTGCGGCCAGGGGGTTAGCTAATTATTTGCTTTATGAGTCAGGAAGGT
AAGTGTCTTCTTTCTCTATTGTTCTAGACATGTCTTCTCCTGAACCTCAT
CCTCTCCCTCCTCTTATCGCAGCAAGGAGCCCAAGATACGGGCACGGATG
AATAAAACCACCTCGGATATGATTAAGCAATGCATGAACAATGCCAAGCG
AGAACGAGAACGAAAAGAGAAGGCTGAGAGAGGAGAAGGGGCAGAATTGG
AGCACTTCCACGTAAAGATTTAACAAGTGAATAGCTAATGCATGTCTATG
AAGATGGCGAGAAGGCAGTGTAAATTCACCGAATGAAGAACTTTAAACGG
GTATTTTGGGTACCTTGGATTTTTTTTTGAAATACGCA
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Coding sequence (CDS) from alignment at KK037255.1:179906..180893-

>rna9695 ID=rna9695|Name=rna9695|organism=Nannochloropsis gaditana|type=CDS|length=2010bp|location=Sequence derived from alignment at KK037255.1:179906..180893- (Nannochloropsis gaditana)
CAAGGAGCCCAAGATACGGGCACGGATGAATAAAACCACCTCGGATATGA
TTAAGCAATGCATGAACAATGCCAAGCGAGAACGAGAACGAAAAGAGAAG
GCTGAGAGAGGAGAAGGGGCAGAATTGGAGCACTTCCACGTAAAGATTTA
ATGCGGCCAGGGGGTTAGCTAATTATTTGCTTTATGAGTCAGGAAGAGCC
CGAAAGGAATTGCACTCAGGAAGATGCTTCGCTCTGAGTTCAAAAAGAAT
GCCGCGGTGGATGATGCCAAGCAAGTGGAACAGCTAAAGATGAATTGTAC
CGAGATTGTCTCCGCGTCGCCGACCACATTGCCAGTAAGATGGCTTTGCC
GTCGGCACACGCAGCAACGCTCAAGAACGTTGCTGGAAAAAGCAGTGTCC
AGCAAGGAGCCCAAGATACGGGCACGGATGAATAAAACCACCTCGGATAT
GATTAAGCAATGCATGAACAATGCCAAGCGAGAACGAGAACGAAAAGAGA
AGGCTGAGAGAGGAGAAGGGGCAGAATTGGAGCACTTCCACGTAAAGATT
TAATGCGGCCAGGGGGTTAGCTAATTATTTGCTTTATGAGTCAGGAAGAG
CCCGAAAGGAATTGCACTCAGGAAGATGCTTCGCTCTGAGTTCAAAAAGA
ATGCCGCGGTGGATGATGCCAAGCAAGTGGAACAGCTAAAGATGAATTGT
ACCGAGATTGTCTCCGCGTCGCCGACCACATTGCCAGTAAGATGGCTTTG
CCGTCGGCACACGCAGCAACGCTCAAGAACGTTGCTGGAAAAAGCAGTGT
CCAGCAAGGAGCCCAAGATACGGGCACGGATGAATAAAACCACCTCGGAT
ATGATTAAGCAATGCATGAACAATGCCAAGCGAGAACGAGAACGAAAAGA
GAAGGCTGAGAGAGGAGAAGGGGCAGAATTGGAGCACTTCCACGTAAAGA
TTTAATGCGGCCAGGGGGTTAGCTAATTATTTGCTTTATGAGTCAGGAAG
AGCCCGAAAGGAATTGCACTCAGGAAGATGCTTCGCTCTGAGTTCAAAAA
GAATGCCGCGGTGGATGATGCCAAGCAAGTGGAACAGCTAAAGATGAATT
GTACCGAGATTGTCTCCGCGTCGCCGACCACATTGCCAGTAAGATGGCTT
TGCCGTCGGCACACGCAGCAACGCTCAAGAACGTTGCTGGAAAAAGCAGT
GTCCAGCAAGGAGCCCAAGATACGGGCACGGATGAATAAAACCACCTCGG
ATATGATTAAGCAATGCATGAACAATGCCAAGCGAGAACGAGAACGAAAA
GAGAAGGCTGAGAGAGGAGAAGGGGCAGAATTGGAGCACTTCCACGTAAA
GATTTAATGCGGCCAGGGGGTTAGCTAATTATTTGCTTTATGAGTCAGGA
AGAGCCCGAAAGGAATTGCACTCAGGAAGATGCTTCGCTCTGAGTTCAAA
AAGAATGCCGCGGTGGATGATGCCAAGCAAGTGGAACAGCTAAAGATGAA
TTGTACCGAGATTGTCTCCGCGTCGCCGACCACATTGCCAGTAAGATGGC
TTTGCCGTCGGCACACGCAGCAACGCTCAAGAACGTTGCTGGAAAAAGCA
GTGTCCAGCAAGGAGCCCAAGATACGGGCACGGATGAATAAAACCACCTC
GGATATGATTAAGCAATGCATGAACAATGCCAAGCGAGAACGAGAACGAA
AAGAGAAGGCTGAGAGAGGAGAAGGGGCAGAATTGGAGCACTTCCACGTA
AAGATTTAATGCGGCCAGGGGGTTAGCTAATTATTTGCTTTATGAGTCAG
GAAGAGCCCGAAAGGAATTGCACTCAGGAAGATGCTTCGCTCTGAGTTCA
AAAAGAATGCCGCGGTGGATGATGCCAAGCAAGTGGAACAGCTAAAGATG
AATTGTACCGAGATTGTCTCCGCGTCGCCGACCACATTGCCAGTAAGATG
GCTTTGCCGTCGGCACACGCAGCAACGCTCAAGAACGTTGCTGGAAAAAG
CAGTGTCCAG
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Synonyms
Publications