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Properties
| Property Name | Value |
|---|
| Product | voltage-gated ion channel superfamily |
| Orig transcript id | gnl|cribi|Naga_100860g1.1697.mrna |
| Orig protein id | gnl|cribi|Naga_100860g1.1697 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037255.1 | supercontig | KK037255.1:124029..125680 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9677 ID=rna9677|Name=rna9677|organism=Nannochloropsis gaditana|type=mRNA|length=1956bp
GCTTTTCTGAGTCCATCGCGAACTCTAGCAGTTGCGTTGTCTCCTTTCTT
CAAAGAATTATTGCCTTTCCCAACACCGCCTTCATCTTCATCGCTACGCA
ATCAGGCAGCCCAACACAATTATGCGCTGCTTTTTATTGAAGTTGCAGAG
CTAAGCAGACGGATACAGCGGTAGTCGAGTCGATTACAGGAGGCAGCACG
AACAGAGGAGCGACTCATGTCGTCGCCCCCGCCGACGCCGCATAAAAGTA
CACGCCAGTCCTTTGGCTTTGACGATGAAGACAAAATTGAAAAGAGGCGG
ACAGAACCATGCCAAATCAGCAGTGGTGGAGATTCACCTTCCAATCCGCC
TGAGGCTAGAGGGCGTCGCGGGACAGGCACGAGCAGCAACCATGGCGCGG
CCGACCTCGCCCAGACCCGAGATGCTGAGACGCGTGCCACCTCGCTTTCC
CTCGCTTCTCCTTCCCCTGCAACGTCCGTCCCACTCCCTGCCGATCCCTT
GTCCTCGTCGGCGCCGTCGATGCCCGCACAGGGGCCAGGCGCCCCTCTCC
CCCTCGAGTTTGGCGCCTTGACACTGGTCCCGTCACCTCCCTTGCGTGGC
CCTTCGCCCTCGCCCACGCCCTCCTCAGAGCGCATGGAGCATCAAGGCAG
AAGCGGGGGCCCGACTGCCCAGCTTGCTTCTCTCGTCCTCCCCGCCGACC
ACGACTCCCTCATCCCCCTGGCTCGAGGCTTCCTCACGCCGCCGCCGACG
CCACACGGGACCACCCGGAGCCCCGCGAGCAGCATGGACCCCGCACTGGC
ACCAAGAAGCTCCCAGTATTCCTTTCCTCGCCCCTCTTCGGCGTCTTCCT
GCGCTCGAGCTTCGGCGGGTCCAGGAGCCCGCCCCCCGGCCCTCCCTCCC
TCCAGCCTTCCCCGCCCCCGTCGTCTCCCCCGCAACCTCTCGCACGCGTT
TCGGAAAAGCTACCCTGCCTTCATTGAGTTCCACATTCCTATCACGCACC
CCCTCCGCCTCCCCGCCGTCCTCCTCTTCGACTCGGTGGCCTGGGACGCT
GGCATCCTCCTCCTCGTCCTCCTGAACGCCCTCACCCTCACCTTCTGGCG
CCCCACAAACGCCTTCTCCTCCTCCTCCCAGGCCATCCTCCTCTTCGAGA
TCATCTTCCAGCTCTGCTTCACGAACGAAGCCGTGGTCAAATTCATCGCC
CTCGGGCTTTTCCGGCATCCCCGTTCGTATTTCCGAGACCCCTGGAACGT
CTTCGACTTCTTCGTCCTCATCGCCGCCTGGCTCGCCCTTTATGCGAGTT
TTTCCTCCTCCGTTGCCCCCCCCCCGGACACCTCCCCAGACTCCCCAAAT
GCCGCGCCCTCCTTGCACGGACCCTTGATGGTCTTCGGTGTTTTGCGGGT
GCTACGACCGTTTCGGATTTTGAATCTCCTCCCCGAGCTGAAACGGCTGA
CCGGGGCCGTGTACCTTGCCCTGCCCTCCCTGACCACCCTCATGTCCCTC
ACCCTCCTCGTCTTCGTCACTCTGGGCGTGGTGGGTTTGAATTTGCTCCG
AGGGACCTTCCACCAACAGTGCTACCGGCCCCGGGGGAATTATTTCGAAT
TCACCGAGGCCAGCACGGACGGGCTGGCCCTCTGCAGTTTGAAGGGGGAG
ACGGGAGGGGGCCGGGAGTGTCCCGCCAATTTCGTCTGCAGGGACGCGCC
CTTGGGCCCCAATTTGGGGTTCACGAGTTTCGATAACGTGTGGGTGGCCT
TTTTGACGATTTTTCAGTGCATGACGCAAGAGGGATGGGTGCAAGTCTTA
TACTGGGCACGGCAGTCGGGGGGACGCTACACGACTGCATATTTCCTCCT
CATTTTCTTCCTTTCCTTTTTTCTCTTCAATTTGATCATCGTCTTCGTGA
TTGTCAACTACTCGTTGAGTCAGGAAAGGGGGGCGATCGACCGGCTGAGG
GAAAGG back to topprotein sequence of rna9677 >rna9677-protein ID=rna9677-protein|Name=rna9677|organism=Nannochloropsis gaditana|type=polypeptide|length=272bp
MTRRLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVV
ISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANS
LPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAV
ISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLGRPWIRRLPAST
ATPPSPPSCADSSSSPASSSPSTPPDLRGEDLRLSSAFSFASGRASFSPS
SSSNRCIARSVWAVSGPTRTPT back to topmRNA from alignment at KK037255.1:124029..125680+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9677 ID=rna9677|Name=rna9677|organism=Nannochloropsis gaditana|type=mRNA|length=1652bp|location=Sequence derived from alignment at KK037255.1:124029..125680+ (Nannochloropsis gaditana)
ATGACCCGTCGACTCGCCCGCGCCCTCACCCGCCTGAACAACCTCTTCGT
CCTGATTTTTTGCCTGGAGGCTTACATCAAGGTGCGGGGCTGGGGCTGGC
CTCTCTACAAAAAGTTGGGCTCGCCGGCCCTGGATTTCTTGGTGGTggtc
atctccctcctggagGTCTTCCTCGGCGGCACCTCCGCCCGTTCCTACGC
CCTGCGCtgcgtccgcctcctccgcctcttcagCCTGGGCCGGAAGTGGA
AGTCCTTCCGACTGGTGCTGACTAACGTGCTCTATACGGCCGccaactcc
ctccccttcctcctcctcaccaccaccttcctctccgtaTTCGCCATCGG
CGGGATGACCTTCCTGGGCGGGAAGCTCCGAGACACAGACCCGTCGACGG
GCCTCCCCGTGCCTGCTCGGGCGAATTTCGACTCCTTCTACTGGGCCGTC
ATCTCCATCTTTCAGATCATGACCCTGGACGACTGGAACCTCCACATGTA
CCGGGCCATGGGGGCAGCTGacgcggcgctggcggcgggGTTTTACGTGA
CAGCTGTCCTCTTGGGGAGGTACGGGCTTTTGAATTTGCTCACCGCCATT
TTGGTGGAGAACTACGCGCAgctccaggaggaggagggggaagggatgaa
ggaggaaggacgggaggttCGGGAGGCCCGGGCgatggggagagaagggg
cggtgacgatggggaaggaagggcggggcagtGGAAGCATCCGGTGcttg
gtgagggaggaggaggagggagggaagggggaggggggccacCCAGAACG
ACTGCCACCTCCCTGGCTCTACCTGTGGCGCCTCCTGACAAAGtggaaag
cctcctccccctcttcctcctccgcttcctcctcctcttcctcctccctc
ctgaagggccctccggccccctcgAAAACCCACACCCATCGCTTTCCCAA
GCAACCACCCCAtgccaccccttcctccttccttacctccttccctgccc
atGGTCCCCCatctaccctcctccccggtaAAAAgaatcccccccctccc
ctccccccttcctcctcccctccctccctccctcccaccggcgCGGGCGG
GCACCTCGTTGACCCCccccgggaggaaggggaggaggacggggaggaag
acacgaAGGGTggcaccctcctcgccctctgtcACCGGTGCTgtctcgcc
ccccccctctcctgcctcctccgcgggcTCCAGGCCCTGGATACGGCGGC
TGCCCGCCTCTACCGccaccccgccttccccaccttcatGCGCcgactcc
tcttcctctcctgcatcgtcctcgccctcgacaCCCCCGGACCTTCGGGG
CGAGGACCTGCGcctctcttccgccttctCATTCGCTTCGGGGAGGGCGT
CTTTTTCggtgcgggggagggagggagggagggagggagggagggaggga
gggagggagggagggaaaggaggggggggggacggcgggTAGGGGAGGGG
TTTTGCGTTTATGCGGCGGTATCGACCACGAagcccttcccatctcctca
cacggccccgccttccctccgcctcagccttcttcctcttcgaacAGGTG
TATTGCGCGAAGCGTCTGGGCGGTGTCTGGACCTACCCGGACTCCTACCT
GA back to topCoding sequence (CDS) from alignment at KK037255.1:124029..125680+ >rna9677 ID=rna9677|Name=rna9677|organism=Nannochloropsis gaditana|type=CDS|length=2457bp|location=Sequence derived from alignment at KK037255.1:124029..125680+ (Nannochloropsis gaditana)
ATGACCCGTCGACTCGCCCGCGCCCTCACCCGCCTGAACAACCTCTTCGT
CCTGATTTTTTGCCTGGAGGCTTACATCAAGGTGCGGGGCTGGGGCTGGC
CTCTCTACAAAAAGTTGGGCTCGCCGGCCCTGGATTTCTTGGTGGTggtc
atctccctcctggagGTCTTCCTCGGCGGCACCTCCGCCCGTTCCTACGC
CCTGCGCtgcgtccgcctcctccgcctcttcagCCTGGGCCGGAAGTGGA
AGTCCTTCCGACTGGTGCTGACTAACGTGCTCTATACGGCCGccaactcc
ctccccttcctcctcctcaccaccaccttcctctccgtaTTCGCCATCGG
CGGGATGACCTTCCTGGGCGGGAAGCTCCGAGACACAGACCCGTCGACGG
GCCTCCCCGTGCCTGCTCGGGCGAATTTCGACTCCTTCTACTGGGCCGTC
ATCTCCATCTTTCAGATCATGACCCTGGACGACTGGAACCTCCACATGTA
CCGGGCCATGGGGGCAGCTGacgcggcgctggcggcgggGTTTTACGTGA
CAGCTGTCCTCTTGGGGAGGCCCTGGATACGGCGGCTGCCCGCCTCTACC
GccaccccgccttccccaccttcatGCGCcgactcctcttcctctcctgc
atcgtcctcgccctcgacaCCCCCGGACCTTCGGGGCGAGGACCTGCGcc
tctcttccgccttctCATTCGCTTCGGGGAGGGCGTCTTTTTCgccttct
tcctcttcgaacAGGTGTATTGCGCGAAGCGTCTGGGCGGTGTCTGGACC
TACCCGGACTCCTACCTGAATGACCCGTCGACTCGCCCGCGCCCTCACCC
GCCTGAACAACCTCTTCGTCCTGATTTTTTGCCTGGAGGCTTACATCAAG
GTGCGGGGCTGGGGCTGGCCTCTCTACAAAAAGTTGGGCTCGCCGGCCCT
GGATTTCTTGGTGGTggtcatctccctcctggagGTCTTCCTCGGCGGCA
CCTCCGCCCGTTCCTACGCCCTGCGCtgcgtccgcctcctccgcctcttc
agCCTGGGCCGGAAGTGGAAGTCCTTCCGACTGGTGCTGACTAACGTGCT
CTATACGGCCGccaactccctccccttcctcctcctcaccaccaccttcc
tctccgtaTTCGCCATCGGCGGGATGACCTTCCTGGGCGGGAAGCTCCGA
GACACAGACCCGTCGACGGGCCTCCCCGTGCCTGCTCGGGCGAATTTCGA
CTCCTTCTACTGGGCCGTCATCTCCATCTTTCAGATCATGACCCTGGACG
ACTGGAACCTCCACATGTACCGGGCCATGGGGGCAGCTGacgcggcgctg
gcggcgggGTTTTACGTGACAGCTGTCCTCTTGGGGAGGCCCTGGATACG
GCGGCTGCCCGCCTCTACCGccaccccgccttccccaccttcatGCGCcg
actcctcttcctctcctgcatcgtcctcgccctcgacaCCCCCGGACCTT
CGGGGCGAGGACCTGCGcctctcttccgccttctCATTCGCTTCGGGGAG
GGCGTCTTTTTCgccttcttcctcttcgaacAGGTGTATTGCGCGAAGCG
TCTGGGCGGTGTCTGGACCTACCCGGACTCCTACCTGAATGACCCGTCGA
CTCGCCCGCGCCCTCACCCGCCTGAACAACCTCTTCGTCCTGATTTTTTG
CCTGGAGGCTTACATCAAGGTGCGGGGCTGGGGCTGGCCTCTCTACAAAA
AGTTGGGCTCGCCGGCCCTGGATTTCTTGGTGGTggtcatctccctcctg
gagGTCTTCCTCGGCGGCACCTCCGCCCGTTCCTACGCCCTGCGCtgcgt
ccgcctcctccgcctcttcagCCTGGGCCGGAAGTGGAAGTCCTTCCGAC
TGGTGCTGACTAACGTGCTCTATACGGCCGccaactccctccccttcctc
ctcctcaccaccaccttcctctccgtaTTCGCCATCGGCGGGATGACCTT
CCTGGGCGGGAAGCTCCGAGACACAGACCCGTCGACGGGCCTCCCCGTGC
CTGCTCGGGCGAATTTCGACTCCTTCTACTGGGCCGTCATCTCCATCTTT
CAGATCATGACCCTGGACGACTGGAACCTCCACATGTACCGGGCCATGGG
GGCAGCTGacgcggcgctggcggcgggGTTTTACGTGACAGCTGTCCTCT
TGGGGAGGCCCTGGATACGGCGGCTGCCCGCCTCTACCGccaccccgcct
tccccaccttcatGCGCcgactcctcttcctctcctgcatcgtcctcgcc
ctcgacaCCCCCGGACCTTCGGGGCGAGGACCTGCGcctctcttccgcct
tctCATTCGCTTCGGGGAGGGCGTCTTTTTCgccttcttcctcttcgaac
AGGTGTATTGCGCGAAGCGTCTGGGCGGTGTCTGGACCTACCCGGACTCC
TACCTGA back to top
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