EWM21027.1, cds9646 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21027.1 vs. NCBI_GenBank
Match: gi|585101031|gb|EWM21027.1| (voltage-gated ion channel superfamily [Nannochloropsis gaditana]) HSP 1 Score: 535.798 bits (1379), Expect = 0.000e+0 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
Query: 1 MTRRLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLGRPWIRRLPASTATPPSPPSCADSSSSPASSSPSTPPDLRGEDLRLSSAFSFASGRASFSPSSSSNRCIARSVWAVSGPTRTPT 272
MTRRLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLGRPWIRRLPASTATPPSPPSCADSSSSPASSSPSTPPDLRGEDLRLSSAFSFASGRASFSPSSSSNRCIARSVWAVSGPTRTPT
Sbjct: 1 MTRRLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLGRPWIRRLPASTATPPSPPSCADSSSSPASSSPSTPPDLRGEDLRLSSAFSFASGRASFSPSSSSNRCIARSVWAVSGPTRTPT 272
BLAST of EWM21027.1 vs. NCBI_GenBank
Match: gi|1176103812|ref|XP_020622701.1| (voltage-dependent T-type calcium channel subunit alpha-1H-like [Orbicella faveolata]) HSP 1 Score: 108.997 bits (271), Expect = 4.853e-23 Identity = 68/186 (36.56%), Postives = 102/186 (54.84%), Query Frame = 0
Query: 4 RLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLG 189
++ L LN +F IF E +K+ G G Y K D +VV+S++E+F GG S+ S LR RLLR+F L R + R L +++T N + FL L F+ +I GM GGK D G+ ARANFD +WA++++FQ++T +DWN MY M A + AA +++ + +G
Sbjct: 945 KMTEVLEILNYIFTAIFGFEMLLKLMGLGPYGYIKDPFNLFDGFIVVMSIVELFGGGDSSIS-VLRSFRLLRIFKLVRFLPALRRQLLVMIHTMDNVMTFLALLVLFIFTASILGMNLFGGKYMFPDED-GVETAARANFDDLFWALVTVFQVLTQEDWNTVMYDGMRAT-SKWAALYFILLMTIG 1127
BLAST of EWM21027.1 vs. NCBI_GenBank
Match: gi|156371714|ref|XP_001628907.1| (predicted protein [Nematostella vectensis] >gi|156215895|gb|EDO36844.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 106.686 bits (265), Expect = 2.659e-22 Identity = 60/170 (35.29%), Postives = 94/170 (55.29%), Query Frame = 0
Query: 3 RRLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGA 172
+++ L N +F IF +E +K+ G G+ Y K D +V+IS++E+F G + LR RLLR+F L R + R L +++T N + FL L F+ +I GM GGK R + G+ +RANFD +WA++++FQ++T +DWN+ MY M A
Sbjct: 437 QKMTDVLEIFNYIFTAIFGIEMIMKLIGLGFYGYIKDAFNIFDGTIVIISVVELF-GDDDSGISVLRSFRLLRVFKLVRFLPALRRQLLVMIHTMDNVMTFLALLVIFMFTASILGMNLFGGKYRFPN-DEGVMETSRANFDDLFWAIVTVFQVLTQEDWNIVMYDGMRA 604
BLAST of EWM21027.1 vs. NCBI_GenBank
Match: gi|831320103|ref|XP_012692866.1| (PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1I-like [Clupea harengus]) HSP 1 Score: 103.219 bits (256), Expect = 4.396e-21 Identity = 63/187 (33.69%), Postives = 98/187 (52.41%), Query Frame = 0
Query: 3 RRLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLG 189
L L N +F +F LE +K+ +G+ Y + D ++V+IS+ E+ +G + LR RLLR+ L R + R L ++ T AN F +L F+ +F+I GM G K G VP R NFDS WA++++FQI+T +DWN+ +Y M A+ + LAA ++V + G
Sbjct: 601 EELTNILEICNIVFTSMFALEMMLKLTAFGFFSYLRNAYNIFDGIIVIISVCEI-IGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMANVATFCMLLMLFIFIFSILGMHIFGCKF-SLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGM-ASTSPLAALYFVALMTFG 784
BLAST of EWM21027.1 vs. NCBI_GenBank
Match: gi|1079742877|ref|XP_018540847.1| (PREDICTED: LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I-like [Lates calcarifer]) HSP 1 Score: 102.834 bits (255), Expect = 6.589e-21 Identity = 64/187 (34.22%), Postives = 97/187 (51.87%), Query Frame = 0
Query: 3 RRLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLG 189
L L N +F +F LE +K+ +G Y + D ++V+IS+ E+ +G + LR RLLR+ L R + R L ++ T N F +L F+ +F+I GM G K TG VP R NFDS WA++++FQI+T +DWN+ +Y M AA + LAA ++V + G
Sbjct: 745 EELTNVLEICNIVFTSMFSLEMILKLTAFGSFNYLRNPYNVFDGIIVIISVCEI-VGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKF-SLKTETGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGM-AATSPLAALYFVALMTFG 928
BLAST of EWM21027.1 vs. NCBI_GenBank
Match: gi|1168879904|ref|XP_020499268.1| (LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I-like [Labrus bergylta]) HSP 1 Score: 102.449 bits (254), Expect = 8.024e-21 Identity = 63/188 (33.51%), Postives = 96/188 (51.06%), Query Frame = 0
Query: 3 RRLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLGR 190
L L N +F +F LE +K+ +G Y + D ++V+IS+ E+ +G + LR RLLR+ L R + R L ++ T N F +L F+ +F+I GM G K TG VP R NFDS WA++++FQI+T +DWN +Y M AA + +AA ++V + G
Sbjct: 698 EELTNVLEICNIVFTSMFSLEMILKITAYGSFTYLRNPYNVFDGIIVIISVCEI-VGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKF-SLKTETGDTVPDRKNFDSLLWAIVTVFQILTQEDWNAVLYNGM-AATSPVAALYFVALMTFGN 882
BLAST of EWM21027.1 vs. NCBI_GenBank
Match: gi|831285226|ref|XP_012673872.1| (PREDICTED: LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I, partial [Clupea harengus]) HSP 1 Score: 102.449 bits (254), Expect = 8.296e-21 Identity = 63/187 (33.69%), Postives = 96/187 (51.34%), Query Frame = 0
Query: 4 RLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLGR 190
L L N +F +F LE +K+ +G+ Y + D ++V+IS+ E+ +G LR RLLR+ L R + R L ++ T N F +L F+ +F+I GM G K G VP R NFDS WA++++FQI+T +DWN+ +Y M AA + LAA ++V + G
Sbjct: 658 ELTNVLEICNIVFTSMFTLEMILKLTAFGFFEYLRNPYNIFDGIIVIISVCEI-IGQADGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKF-SLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNMVLYNGM-AATSPLAALYFVALMTFGN 841
BLAST of EWM21027.1 vs. NCBI_GenBank
Match: gi|768942602|ref|XP_011611054.1| (PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1I-like isoform X2 [Takifugu rubripes]) HSP 1 Score: 102.449 bits (254), Expect = 8.324e-21 Identity = 64/188 (34.04%), Postives = 97/188 (51.60%), Query Frame = 0
Query: 3 RRLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLGR 190
L L N +F +F LE +K+ +G Y + D ++V+IS+ E+ +G + LR RLLR+ L R + R L ++ T N F +L F+ +F+I GM G K TG VP R NFDS WA++++FQI+T +DWN+ +Y M AA + LAA ++V + G
Sbjct: 701 EELTNVLEICNIVFTSMFSLEMILKLTAFGSFNYLRNPYNVFDGVIVIISVCEI-VGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKF-SIKTETGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGM-AATSPLAALYFVALMTFGN 885
BLAST of EWM21027.1 vs. NCBI_GenBank
Match: gi|768942600|ref|XP_011611053.1| (PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1I-like isoform X1 [Takifugu rubripes]) HSP 1 Score: 102.449 bits (254), Expect = 8.729e-21 Identity = 64/188 (34.04%), Postives = 97/188 (51.60%), Query Frame = 0
Query: 3 RRLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLGR 190
L L N +F +F LE +K+ +G Y + D ++V+IS+ E+ +G + LR RLLR+ L R + R L ++ T N F +L F+ +F+I GM G K TG VP R NFDS WA++++FQI+T +DWN+ +Y M AA + LAA ++V + G
Sbjct: 701 EELTNVLEICNIVFTSMFSLEMILKLTAFGSFNYLRNPYNVFDGVIVIISVCEI-VGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKF-SIKTETGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGM-AATSPLAALYFVALMTFGN 885
BLAST of EWM21027.1 vs. NCBI_GenBank
Match: gi|929327169|ref|XP_014040178.1| (PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1I-like, partial [Salmo salar]) HSP 1 Score: 97.8265 bits (242), Expect = 9.711e-21 Identity = 71/234 (30.34%), Postives = 109/234 (46.58%), Query Frame = 0
Query: 3 RRLARALTRLNNLFVLIFCLEAYIKVRGWGWPLYKKLGSPALDFLVVVISLLEVFLGGTSARSYALRCVRLLRLFSLGRKWKSFRLVLTNVLYTAANSLPFLLLTTTFLSVFAIGGMTFLGGKLRDTDPSTGLPVPARANFDSFYWAVISIFQIMTLDDWNLHMYRAMGAADAALAAGFYVTAVLLGRPWIRRLPASTATPP-SPPSCADSSSSPASSSPSTPPDLRGEDLRLS 235
L L N +F +F +E +K+ G Y + D ++V+IS+ E+ +G + LR RLLR+ L R + R L ++ T N F +L F+ +F+I GM G K G VP R NFDS WA++++FQI+T +DWN +Y M AA + LAA ++V + G + L + A+ S S SS + + L+LS
Sbjct: 20 EELTNVLEICNIVFTSMFAMEMILKITASGCFNYLRNPYNVFDGVIVIISVCEI-IGQSDGGLSILRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFS-LKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNTVLYNGM-AATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSEDDSSNFDESEKLNDSLKLS 250 The following BLAST results are available for this feature:
BLAST of EWM21027.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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