rna9667, rna9667 (mRNA) Nannochloropsis gaditana

Overview
Namerna9667
Unique Namerna9667
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length285
Alignment locationKK037255.1:103612..104771 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100422g1.3149.mrna
Orig protein idgnl|cribi|Naga_100422g1.3149
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:103612..104771 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100422g1gene9387Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9667rna9667-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21035.1cds9636Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9667 ID=rna9667|Name=rna9667|organism=Nannochloropsis gaditana|type=mRNA|length=285bp
ATGGCTGACGTCTTCAGCAATGGCGCTATATCTGTGGACGGATTTTTATT
CCATGCGGTGACGACACAACATGAATTGCTGAGTTTTTTTCGCCTTGCCC
TTAGCTTCATCTCCTCCCTTTCTGCGGCCAACCGCATGAGAGAAGCTCTG
TGCGCTTCCACGGCTATCCTTTTCAGGATTTATGGGCATGCGCACGCGAC
GCCTTCTAAGTGTTTTCATATGTTGATGCCTGTAGGCTCGCATTTACGTT
TAAATACATCCAGCACCCTGGTTGCGGCGATATAA
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protein sequence of rna9667

>rna9667-protein ID=rna9667-protein|Name=rna9667|organism=Nannochloropsis gaditana|type=polypeptide|length=303bp
MEVVRGREALDAGPCRAFFSPPRRLLSLHFHLLLLALAILFCSHNVVARR
PCPSFISSSLSNKSLLKHRFTLRPLCFVKTRISSSPLPKLPLTSSFPLFA
ATDQNKKESPAEKNTGNEAGELRKLLTNDTKEKPLLVYLTLISIALLALG
VGTYEFGGPLLGLGFSDDSNFYFDAAPSYAPEPPSQDFGGLLPHHTAHLL
LPLPRPGLGAHERARIDHGGRSDPLLPHLLLLAGHGGVHGDRGGGREGGK
RTVAQDRCHLLINEIFLSVPAEACILEREGVPFECKGRTCPRTGERKGLG
TDP
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mRNA from alignment at KK037255.1:103612..104771-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9667 ID=rna9667|Name=rna9667|organism=Nannochloropsis gaditana|type=mRNA|length=1160bp|location=Sequence derived from alignment at KK037255.1:103612..104771- (Nannochloropsis gaditana)
ATGGAGGTCGTAAGGGGCCGCGAAGCTTTGGACGCCGGTCCCTGTCGTGC
GTTCTTCTCCCCTCCTCGTCGCCTCCTCTCGCTTCACTTCCACCTCCTCC
TCCTCGCTCTTGCTATATTATTTTGCAGCCATAATGTCGTCGCGCGTCGC
CCATGTCCTTCCTTCATCTCCAGCTCACTCTCTAATAAATCTCTTTTAAA
GCACCGGTTCACGCTGCGTCCCCTCTGCTTCGTCAAGACACGCATCTCCT
CCTCCCCCCTTCCCAAGCTCCCACTCACAAGTTCATTCCCTCTCTTCGCC
GCAACTGACCAAAACAAGAAGGAAAGCCCAGCTGAGAAAAATACAGGGAA
TGAAGCTGGCGAACTAAGAAAACTGCTTACGAACGACACGAAAGAAAAAC
CTCTGCTTGTCTACCTGACCCTAATTTCCATCGCCCTCCTTGCCCTGGGT
AGGCCCCCCCCCCTTCTGCCTTCCTCCCTTCGCGTCTGCCTCTCACCTTT
CTTCCGCTTTAAATTTTAACATTGATTTGTCTCTCGTCTGCCGCGATATT
TCGGGCCTTCTCTGCGTGCGCTGCTTTTTCTCGCCGCAGCCGACCCCTCT
GACTGGACCGCTCCTGGGCTTTCCCCCCTCCTCTTTCCCTCCCTCCCTTC
AGGGGTTGGCACGTACGAATTCGGTGGTCCACTTCTAGGTCTCGGCTTCA
GCGACGACAGCAATTTCTACTTCGACGCCGCTCCTTCCTACGCGTTGCTC
CTCGTGTACCCGCCCCTCTTCCTCTTCTTCCCCGAAGCCCGGAACCTCCT
TCTCAAGACTTTGGTGGTCTCCTTCCTCATCACACTGCCCATCTACTTCT
TCCCTTACCACGTCCTGGGCTGGGAGCCCACGAACGAGCACGTATTGATC
ACGGTGGCCGTTCCGATCCTCTCCTACCTCACCTTCTTCTCCTGGCGGGC
CACGGCGGCGTACATGGAGATCGTGGAGGAGGAAGGGAAGGAGGGAAAAG
AACTGTAGCCCAAGATCGGTGTCACCTTCTAATCAACGAAATATTTTTGA
GCGTGCCTGCGGAGGCGTGTATTCTGGAGAGGGAGGGTGTGCCTTTTGAG
TGCAAAGGAAGGACATGCCCGCGTACTGGGGAAAGAAAAGGGCTTGGAAC
CGACCCTTGA
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Coding sequence (CDS) from alignment at KK037255.1:103612..104771-

>rna9667 ID=rna9667|Name=rna9667|organism=Nannochloropsis gaditana|type=CDS|length=2736bp|location=Sequence derived from alignment at KK037255.1:103612..104771- (Nannochloropsis gaditana)
CCCGGAACCTCCTTCTCAAGACTTTGGTGGTCTCCTTCCTCATCACACTG
CCCATCTACTTCTTCCCTTACCACGTCCTGGGCTGGGAGCCCACGAACGA
GCACGTATTGATCACGGTGGCCGTTCCGATCCTCTCCTACCTCACCTTCT
TCTCCTGGCGGGCCACGGCGGCGTACATGGAGATCGTGGAGGAGGAAGGG
AAGGAGGGAAAAGAACTGTAGCCCAAGATCGGTGTCACCTTCTAATCAAC
GAAATATTTTTGAGCGTGCCTGCGGAGGCGTGTATTCTGGAGAGGGAGGG
TGTGCCTTTTGAGTGCAAAGGAAGGACATGCCCGCGTACTGGGGAAAGAA
AAGGGCTTGGAACCGACCCTTGAGGGTTGGCACGTACGAATTCGGTGGTC
CACTTCTAGGTCTCGGCTTCAGCGACGACAGCAATTTCTACTTCGACGCC
GCTCCTTCCTACGCATGGAGGTCGTAAGGGGCCGCGAAGCTTTGGACGCC
GGTCCCTGTCGTGCGTTCTTCTCCCCTCCTCGTCGCCTCCTCTCGCTTCA
CTTCCACCTCCTCCTCCTCGCTCTTGCTATATTATTTTGCAGCCATAATG
TCGTCGCGCGTCGCCCATGTCCTTCCTTCATCTCCAGCTCACTCTCTAAT
AAATCTCTTTTAAAGCACCGGTTCACGCTGCGTCCCCTCTGCTTCGTCAA
GACACGCATCTCCTCCTCCCCCCTTCCCAAGCTCCCACTCACAAGTTCAT
TCCCTCTCTTCGCCGCAACTGACCAAAACAAGAAGGAAAGCCCAGCTGAG
AAAAATACAGGGAATGAAGCTGGCGAACTAAGAAAACTGCTTACGAACGA
CACGAAAGAAAAACCTCTGCTTGTCTACCTGACCCTAATTTCCATCGCCC
TCCTTGCCCTGGCCCGGAACCTCCTTCTCAAGACTTTGGTGGTCTCCTTC
CTCATCACACTGCCCATCTACTTCTTCCCTTACCACGTCCTGGGCTGGGA
GCCCACGAACGAGCACGTATTGATCACGGTGGCCGTTCCGATCCTCTCCT
ACCTCACCTTCTTCTCCTGGCGGGCCACGGCGGCGTACATGGAGATCGTG
GAGGAGGAAGGGAAGGAGGGAAAAGAACTGTAGCCCAAGATCGGTGTCAC
CTTCTAATCAACGAAATATTTTTGAGCGTGCCTGCGGAGGCGTGTATTCT
GGAGAGGGAGGGTGTGCCTTTTGAGTGCAAAGGAAGGACATGCCCGCGTA
CTGGGGAAAGAAAAGGGCTTGGAACCGACCCTTGAGGGTTGGCACGTACG
AATTCGGTGGTCCACTTCTAGGTCTCGGCTTCAGCGACGACAGCAATTTC
TACTTCGACGCCGCTCCTTCCTACGCATGGAGGTCGTAAGGGGCCGCGAA
GCTTTGGACGCCGGTCCCTGTCGTGCGTTCTTCTCCCCTCCTCGTCGCCT
CCTCTCGCTTCACTTCCACCTCCTCCTCCTCGCTCTTGCTATATTATTTT
GCAGCCATAATGTCGTCGCGCGTCGCCCATGTCCTTCCTTCATCTCCAGC
TCACTCTCTAATAAATCTCTTTTAAAGCACCGGTTCACGCTGCGTCCCCT
CTGCTTCGTCAAGACACGCATCTCCTCCTCCCCCCTTCCCAAGCTCCCAC
TCACAAGTTCATTCCCTCTCTTCGCCGCAACTGACCAAAACAAGAAGGAA
AGCCCAGCTGAGAAAAATACAGGGAATGAAGCTGGCGAACTAAGAAAACT
GCTTACGAACGACACGAAAGAAAAACCTCTGCTTGTCTACCTGACCCTAA
TTTCCATCGCCCTCCTTGCCCTGGCCCGGAACCTCCTTCTCAAGACTTTG
GTGGTCTCCTTCCTCATCACACTGCCCATCTACTTCTTCCCTTACCACGT
CCTGGGCTGGGAGCCCACGAACGAGCACGTATTGATCACGGTGGCCGTTC
CGATCCTCTCCTACCTCACCTTCTTCTCCTGGCGGGCCACGGCGGCGTAC
ATGGAGATCGTGGAGGAGGAAGGGAAGGAGGGAAAAGAACTGTAGCCCAA
GATCGGTGTCACCTTCTAATCAACGAAATATTTTTGAGCGTGCCTGCGGA
GGCGTGTATTCTGGAGAGGGAGGGTGTGCCTTTTGAGTGCAAAGGAAGGA
CATGCCCGCGTACTGGGGAAAGAAAAGGGCTTGGAACCGACCCTTGAGGG
TTGGCACGTACGAATTCGGTGGTCCACTTCTAGGTCTCGGCTTCAGCGAC
GACAGCAATTTCTACTTCGACGCCGCTCCTTCCTACGCATGGAGGTCGTA
AGGGGCCGCGAAGCTTTGGACGCCGGTCCCTGTCGTGCGTTCTTCTCCCC
TCCTCGTCGCCTCCTCTCGCTTCACTTCCACCTCCTCCTCCTCGCTCTTG
CTATATTATTTTGCAGCCATAATGTCGTCGCGCGTCGCCCATGTCCTTCC
TTCATCTCCAGCTCACTCTCTAATAAATCTCTTTTAAAGCACCGGTTCAC
GCTGCGTCCCCTCTGCTTCGTCAAGACACGCATCTCCTCCTCCCCCCTTC
CCAAGCTCCCACTCACAAGTTCATTCCCTCTCTTCGCCGCAACTGACCAA
AACAAGAAGGAAAGCCCAGCTGAGAAAAATACAGGGAATGAAGCTGGCGA
ACTAAGAAAACTGCTTACGAACGACACGAAAGAAAAACCTCTGCTTGTCT
ACCTGACCCTAATTTCCATCGCCCTCCTTGCCCTGG
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Synonyms
Publications