EWM21035.1, cds9636 (CDS) Nannochloropsis gaditana

Overview
NameEWM21035.1
Unique Namecds9636
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:104324..104771 -
Alignment locationKK037255.1:104029..104119 -
Alignment locationKK037255.1:103612..103984 -

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Properties
Property NameValue
Protein idEWM21035.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100422g1.3149.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:104324..104771 -
KK037255.1supercontigKK037255.1:104029..104119 -
KK037255.1supercontigKK037255.1:103612..103984 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM21035.1 vs. NCBI_GenBank
Match: gi|585101043|gb|EWM21035.1| (hypothetical protein Naga_100422g1 [Nannochloropsis gaditana])

HSP 1 Score: 600.897 bits (1548), Expect = 0.000e+0
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0 
Query:    1 MEVVRGREALDAGPCRAFFSPPRRLLSLHFHLLLLALAILFCSHNVVARRPCPSFISSSLSNKSLLKHRFTLRPLCFVKTRISSSPLPKLPLTSSFPLFAATDQNKKESPAEKNTGNEAGELRKLLTNDTKEKPLLVYLTLISIALLALGVGTYEFGGPLLGLGFSDDSNFYFDAAPSYAPEPPSQDFGGLLPHHTAHLLLPLPRPGLGAHERARIDHGGRSDPLLPHLLLLAGHGGVHGDRGGGREGGKRTVAQDRCHLLINEIFLSVPAEACILEREGVPFECKGRTCPRTGERKGLGTDP 303
            MEVVRGREALDAGPCRAFFSPPRRLLSLHFHLLLLALAILFCSHNVVARRPCPSFISSSLSNKSLLKHRFTLRPLCFVKTRISSSPLPKLPLTSSFPLFAATDQNKKESPAEKNTGNEAGELRKLLTNDTKEKPLLVYLTLISIALLALGVGTYEFGGPLLGLGFSDDSNFYFDAAPSYAPEPPSQDFGGLLPHHTAHLLLPLPRPGLGAHERARIDHGGRSDPLLPHLLLLAGHGGVHGDRGGGREGGKRTVAQDRCHLLINEIFLSVPAEACILEREGVPFECKGRTCPRTGERKGLGTDP
Sbjct:    1 MEVVRGREALDAGPCRAFFSPPRRLLSLHFHLLLLALAILFCSHNVVARRPCPSFISSSLSNKSLLKHRFTLRPLCFVKTRISSSPLPKLPLTSSFPLFAATDQNKKESPAEKNTGNEAGELRKLLTNDTKEKPLLVYLTLISIALLALGVGTYEFGGPLLGLGFSDDSNFYFDAAPSYAPEPPSQDFGGLLPHHTAHLLLPLPRPGLGAHERARIDHGGRSDPLLPHLLLLAGHGGVHGDRGGGREGGKRTVAQDRCHLLINEIFLSVPAEACILEREGVPFECKGRTCPRTGERKGLGTDP 303
[Close]
BLAST of EWM21035.1 vs. NCBI_GenBank
Match: gi|553192093|ref|XP_005855513.1| (hypothetical protein NGA_0639900 [Nannochloropsis gaditana CCMP526] >gi|422293552|gb|EKU20852.1| hypothetical protein NGA_0639900 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 358.607 bits (919), Expect = 1.019e-121
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 
Query:    1 MEVVRGREALDAGPCRAFFSPPRRLLSLHFHLLLLALAILFCSHNVVARRPCPSFISSSLSNKSLLKHRFTLRPLCFVKTRISSSPLPKLPLTSSFPLFAATDQNKKESPAEKNTGNEAGELRKLLTNDTKEKPLLVYLTLISIALLALGVGTYEFGGPLLGLGFSDDSNFYFDAAPSYA 180
            MEVVRGREALDAGPCRAFFSPPRRLLSLHFHLLLLALAILFCSHNVVARRPCPSFISSSLSNKSLLKHRFTLRPLCFVKTRISSSPLPKLPLTSSFPLFAATDQNKKESPAEKNTGNEAGELRKLLTNDTKEKPLLVYLTLISIALLALGVGTYEFGGPLLGLGFSDDSNFYFDAAPSYA
Sbjct:    1 MEVVRGREALDAGPCRAFFSPPRRLLSLHFHLLLLALAILFCSHNVVARRPCPSFISSSLSNKSLLKHRFTLRPLCFVKTRISSSPLPKLPLTSSFPLFAATDQNKKESPAEKNTGNEAGELRKLLTNDTKEKPLLVYLTLISIALLALGVGTYEFGGPLLGLGFSDDSNFYFDAAPSYA 180
The following BLAST results are available for this feature:
BLAST of EWM21035.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101043|gb|EWM21035.1|0.000e+0100.00hypothetical protein Naga_100422g1 [Nannochloropsi... [more]
gi|553192093|ref|XP_005855513.1|1.019e-121100.00hypothetical protein NGA_0639900 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9667rna9667Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications