rna9663, rna9663 (mRNA) Nannochloropsis gaditana

Overview
Namerna9663
Unique Namerna9663
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1049
Alignment locationKK037255.1:87955..89414 -

Link to JBrowse

Properties
Property NameValue
Productdihydrokaempferol 4-reductase
Orig transcript idgnl|cribi|Naga_101246g1.10497.mrna
Orig protein idgnl|cribi|Naga_101246g1.10497
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:87955..89414 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101246g1gene9383Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21041.1cds9632Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9663rna9663-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9663 ID=rna9663|Name=rna9663|organism=Nannochloropsis gaditana|type=mRNA|length=1049bp
CCTTCCTTCCCTTCCTTTATTCTTTCCCTTGCTCGTCGTCGCCGTTTTTC
TTGCTTTTCGGGAATGGCAGCTTACCTAGCGCCCTCATGCTCACCCACGA
ACCTTAACTCCCCTTCCTCCCTCTCCCCCAGCTATATCGTCTCCTCGTCC
CACACCGTAACGCCCGCCTGGGTCTCGGCCGTTATCGACCGTTATTTCCC
CGACCGTTTCCCCCAACTTCCCCGGGGCGAAGGATCTCCTAGGGCGACAA
GCAAGAAAGTGTTCGACGTCCGAAAGGCCGAGAGGTTGTTGGGACGGCCG
TTACGGGCGCCAGAGGAGACCTTGCGGGACATGGTGCAGGCGCTGCTGGA
GGCCCGGGGGGAGGGAGGCGTGTAAATAAACATGGGGCGGAACACTTGCA
ATGGAGGAAGGAGATGTGCATGACTTGAGCTATTGAAGGAAGTGACAAGC
ATTAAAAAGTCGGGATCAGGAGGGGGTCGAGAGAGGAGGCTTGTGTTCAT
AGGTGTGTTGGGGAGGGAAGGATATGGGCCAGGGTCCCGAGGGAGGGGCG
CAGAATATGGAAAGGAAAGCCATAGACGTGCCATGGATGGATGCGACCGG
GTGTAGAGGGGAAAGAACCTATCCTCTCCGTGCCGCGACGCTTCATTTGT
TGCTCATTTCGTCGTCCTTTGGGGTGATTTTGATTCGCCTTGACTGGGCA
CGGAGGTAGTCGCGGTCTTCTCAGGCCCTACCGCACCATCAGATCGTTAC
AAGGCAGGCGAGGAGACAGAGGGGCCTCGCGGAGGATGCGACGAGGCTGT
CGCCCGCCCCTGAGTCCTTCCAACCCCATCCCTCCTTTTCGAGCTTCCCC
CCCCCCACTCCCACGATGTCTCTGAGGCGCTACCACAAGCATTCTGACCC
CTGTCTCTTTCCCTCCTTCCCGACCGCCTGCGCCCTACCGCTTTTCAAAA
TTCAAATGCAAGCTGCAGACGATCATGCCGATCCGCAGGAGGAGGATCAT
CGCGAGCAAGACTCCCGGGGTCCACCAGGCCTGCCAGGGGGGGGAGCCA
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protein sequence of rna9663

>rna9663-protein ID=rna9663-protein|Name=rna9663|organism=Nannochloropsis gaditana|type=polypeptide|length=275bp
MKAVQFLRLYRRNNPMQNSPTPSSSFSSSSSSSSKSLFTLLFLSSLLSCS
TAFASSSPPTSTAPPSSSSPSSFPPTTVCVTGCNGYVASELVKQLLERGY
NVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKED
SRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVV
YASGADPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRL
ILTSSTGAVYGGPTAVPKSALEKGG
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mRNA from alignment at KK037255.1:87955..89414-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9663 ID=rna9663|Name=rna9663|organism=Nannochloropsis gaditana|type=mRNA|length=1460bp|location=Sequence derived from alignment at KK037255.1:87955..89414- (Nannochloropsis gaditana)
GGAGGCGTGTGGTGCCTGAGTGAGGGATGAGCACAGATTGGAGCGGGTTA
TGCGTGAGAAATGCCATGCATGTGGCCTATATTGGTCCTTTGAGAGGTCT
GGGGGGCCGGTGAGGGGTTTGATGAGGAGGCAGCGAGGGGGAAGGGAGGC
GGCAGGCATGACACCCGTGACACCAACAGCCGCTCGCCGGGGTAGTGATG
CATGTAAAAGCAGCACATATGACGTGTGGTAGTGTGTCGTTGCTATCGGT
AGTGGGGAATGATCGTTGTCGAGGACTCTTGTCTGTTTGACCTTTCCTCT
TTCCCTCCCTTCCCCCTTGCATCCGGCTTCTGCTTCCCCTCCTCCGCTTC
ATTCCCCCACTTGTGGCAATTCACCGAGCACTTCATGTTTCTTCCTCCTT
CGCACCCGTAGACATCTACAGCACGCACAAGTGCCTTTACTTCCGGTTGT
GCCTGCTTGACACGTTGACAGAGCCCGACGCGGCCTTCCACCGCACCGAC
CTTCAACCTCCTCCCCCCTTGCTTCGGCTACTTGTTGATTTCCCCTATAT
AGTTGAAAATCAGAGCTCCTGGTTCTGTTTGTCTTTTTGATGCCTTGTGC
ATTCTCAAAGTGAATTCAAGGCCATTTCGAGTCAATGAAGGCCGTCCAAT
TTCTTCGTCTCTATCGCCGGAACAACCCCATGCAGAACTCTCCTACTCCT
TCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCAAAGTCTCTTTTCAC
TCTCCTTTTCTTATCCTCCCTTCTGTCCTGTTCAACCGCCTTTGCCTCCT
CCTCTCCACCTACCTCGACCGCCCCGCCATCCTCCTCCTCCCCTTCATCC
TTTCCCCCCACCACGGTGTGCGTCACGGGGTGTAACGGCTACGTGGCCTC
CGAGCTGGTGAAACAGCTGCTTGAACGGGGATACAACGTGCATGGGACCG
TGCGCAAGCTCCACAAACTGACCGAGGAGGAACGAGAGGAAAAGTACGGG
CCATTGGCCAAATTGGGCAGAGGGAGGGGAGGAGGAGGTGGCGGAGGACA
AGGGGAAAGGGTGGGAAGACACAGGAAAGAAGACAGTCGGGGTTCATGCG
ACGAAGGAGTAGGGGATGGTGAAAAAGGAAGAGGGTGCCTTACCCTCTTC
GAAGCGGATTTGCGGCAACCGCATTCGTTCGACGCGGCGGTCCGAGGATG
CACGTATGTCTTCCACGTGGCATCTCCCGTGGTGTATGCCAGCGGAGCCG
ATCCTGAGACAGATTTGCTTGAACCAGCCCTGGAGGGGGTTCGGAATGTG
CTGAGGGCGATTCAAGATAGTCGGAGGGAGGAGGGAGGGAGGGAGGGAGG
GAAGGAGGGAGGGAGGGAGAGGTTCAAGCGGTTGATTTTGACATCGTCTA
CCGGAGCTGTCTATGGAGGGCCCACCGCAGTGCCGAAGAGTGCGCTTGAG
AAAGGGGGGG
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Coding sequence (CDS) from alignment at KK037255.1:87955..89414-

>rna9663 ID=rna9663|Name=rna9663|organism=Nannochloropsis gaditana|type=CDS|length=826bp|location=Sequence derived from alignment at KK037255.1:87955..89414- (Nannochloropsis gaditana)
ATGAAGGCCGTCCAATTTCTTCGTCTCTATCGCCGGAACAACCCCATGCA
GAACTCTCCTACTCCTTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCT
CAAAGTCTCTTTTCACTCTCCTTTTCTTATCCTCCCTTCTGTCCTGTTCA
ACCGCCTTTGCCTCCTCCTCTCCACCTACCTCGACCGCCCCGCCATCCTC
CTCCTCCCCTTCATCCTTTCCCCCCACCACGGTGTGCGTCACGGGGTGTA
ACGGCTACGTGGCCTCCGAGCTGGTGAAACAGCTGCTTGAACGGGGATAC
AACGTGCATGGGACCGTGCGCAAGCTCCACAAACTGACCGAGGAGGAACG
AGAGGAAAAGTACGGGCCATTGGCCAAATTGGGCAGAGGGAGGGGAGGAG
GAGGTGGCGGAGGACAAGGGGAAAGGGTGGGAAGACACAGGAAAGAAGAC
AGTCGGGGTTCATGCGACGAAGGAGTAGGGGATGGTGAAAAAGGAAGAGG
GTGCCTTACCCTCTTCGAAGCGGATTTGCGGCAACCGCATTCGTTCGACG
CGGCGGTCCGAGGATGCACGTATGTCTTCCACGTGGCATCTCCCGTGGTG
TATGCCAGCGGAGCCGATCCTGAGACAGATTTGCTTGAACCAGCCCTGGA
GGGGGTTCGGAATGTGCTGAGGGCGATTCAAGATAGTCGGAGGGAGGAGG
GAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGAGGTTCAAGCGGTTG
ATTTTGACATCGTCTACCGGAGCTGTCTATGGAGGGCCCACCGCAGTGCC
GAAGAGTGCGCTTGAGAAAGGGGGGG
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Synonyms
Publications