EWM21041.1, cds9632 (CDS) Nannochloropsis gaditana

Overview
NameEWM21041.1
Unique Namecds9632
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:87955..88780 -

Link to JBrowse

Properties
Property NameValue
Start range87955
Start range.
Protein idEWM21041.1
Productdihydrokaempferol 4-reductase
Partialtrue
Orig transcript idgnl|cribi|Naga_101246g1.10497.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:87955..88780 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0050662coenzyme binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase_N
IPR016040NAD(P)-bd_dom
Homology
BLAST of EWM21041.1 vs. NCBI_GenBank
Match: gi|585101053|gb|EWM21041.1| (dihydrokaempferol 4-reductase, partial [Nannochloropsis gaditana])

HSP 1 Score: 549.28 bits (1414), Expect = 0.000e+0
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
Query:    1 MKAVQFLRLYRRNNPMQNSPTPSSSFSSSSSSSSKSLFTLLFLSSLLSCSTAFASSSPPTSTAPPSSSSPSSFPPTTVCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGADPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAVYGGPTAVPKSALEKGG 275
            MKAVQFLRLYRRNNPMQNSPTPSSSFSSSSSSSSKSLFTLLFLSSLLSCSTAFASSSPPTSTAPPSSSSPSSFPPTTVCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGADPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAVYGGPTAVPKSALEKGG
Sbjct:    1 MKAVQFLRLYRRNNPMQNSPTPSSSFSSSSSSSSKSLFTLLFLSSLLSCSTAFASSSPPTSTAPPSSSSPSSFPPTTVCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGADPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAVYGGPTAVPKSALEKGG 275          
BLAST of EWM21041.1 vs. NCBI_GenBank
Match: gi|1181018501|ref|WP_084431546.1| (cinnamyl alcohol dehydrogenase [Kibdelosporangium aridum] >gi|1175105791|emb|SMD22792.1| Nucleoside-diphosphate-sugar epimerase [Kibdelosporangium aridum])

HSP 1 Score: 108.227 bits (269), Expect = 8.215e-24
Identity = 74/187 (39.57%), Postives = 95/187 (50.80%), Query Frame = 0
Query:   76 TTVCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGA-DPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAVYG 261
            TTV VTG +G+VAS LV+QLLERGY VH TVR+L          K  PL ++           Q E  GR                       L LFEADL    SFDAA+RGC +VFHVASP +      D  TD+LEPAL+G RNVL +++ +                  +R++LTS+ GA++G
Sbjct:    4 TTVLVTGGSGFVASHLVRQLLERGYTVHSTVRRLGN------SAKVAPLERM-----------QAEFPGR-----------------------LDLFEADLLTDGSFDAAMRGCRHVFHVASPFLMPEKIKDGRTDVLEPALQGTRNVLASVERT---------------PTVRRVVLTSTVGAIFG 135          
BLAST of EWM21041.1 vs. NCBI_GenBank
Match: gi|1191640710|gb|OTF92712.1| (putative NAD(P)-binding domain-containing protein [Helianthus annuus])

HSP 1 Score: 105.145 bits (261), Expect = 1.497e-23
Identity = 70/183 (38.25%), Postives = 92/183 (50.27%), Query Frame = 0
Query:   77 TVCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGADPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAV 259
             VCVTG +GY+AS LVK LL+RGY VH TVR L    ++ +E ++  L  L                                 DG K R  L+LFEA+L    SFD+AV GC  VFH ASPV +AS  DP+ +LL+PA++G  NVL++                   +  KR++LTSS  AV
Sbjct:    7 VVCVTGASGYIASWLVKLLLDRGYTVHATVRSL----DDPKETQH--LLAL---------------------------------DGAKER--LSLFEANLTTEGSFDSAVSGCICVFHTASPVTFASVDDPQMELLDPAVKGTLNVLKS---------------AAKVQSLKRVVLTSSLAAV 133          
BLAST of EWM21041.1 vs. NCBI_GenBank
Match: gi|518971674|ref|WP_020127549.1| (cinnamyl-alcohol dehydrogenase [Streptomyces sp. 303MFCol5.2])

HSP 1 Score: 106.301 bits (264), Expect = 5.321e-23
Identity = 75/186 (40.32%), Postives = 92/186 (49.46%), Query Frame = 0
Query:   77 TVCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGA-DPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAVYG 261
            TV VTG +G+VA+ LV+QLLERGY+VH TVR          E K  PL  LG                                D   GR  L LFEADL    SFDAA+RGCT VFHVASP +      D   D++EPAL G RNV+ AI+ +               E  +RL+LTS+ GA++G
Sbjct:    9 TVLVTGGSGFVAAHLVQQLLERGYHVHTTVRA------TANEAKRRPLRALG--------------------------------DAHPGR--LDLFEADLLTEGSFDAAMRGCTVVFHVASPFLMPEKIKDGRRDVVEPALAGTRNVVAAIERT---------------ETVERLVLTSTVGAIFG 139          
BLAST of EWM21041.1 vs. NCBI_GenBank
Match: gi|1086271254|emb|SDB91048.1| (dihydroflavonol-4-reductase/hypothetical protein [Acinetobacter kookii])

HSP 1 Score: 103.99 bits (258), Expect = 3.657e-22
Identity = 62/193 (32.12%), Postives = 90/193 (46.63%), Query Frame = 0
Query:   78 VCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGADPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAVYGGPTAVPKSA 270
            + VTG  GY+AS ++K LLE+G+ VH TVR L+K      +  +  L K+                                    +  G L LF+A+L +PHSFDAA++GC  V H+ASP V  +  D   D++EPA+ G  NVL ++  +               E  KR+I+TSS  A YG    +  +A
Sbjct:   10 ILVTGATGYIASWVIKNLLEQGHTVHATVRNLNK------KPSFAHLEKIA----------------------------------AETTGTLKLFKANLLEPHSFDAAMQGCEIVLHMASPFVVNNFKDAVKDIIEPAILGTENVLNSVNKT---------------ESVKRVIVTSSIAATYGDAIDIQHTA 147          
BLAST of EWM21041.1 vs. NCBI_GenBank
Match: gi|913090897|ref|WP_050373227.1| (cinnamyl-alcohol dehydrogenase [Streptomyces acidiscabies] >gi|908283849|gb|KND30375.1| cinnamyl-alcohol dehydrogenase [Streptomyces acidiscabies])

HSP 1 Score: 103.605 bits (257), Expect = 4.036e-22
Identity = 70/191 (36.65%), Postives = 92/191 (48.17%), Query Frame = 0
Query:   77 TVCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGA-DPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAVYGGPTAV 266
            TV VTG +G+VA+ LV++LLERGY VH TVR L          K  PL  LG                                  E+  G L LFEADL +  SFD A RGC+ VFHVASP +      D + D+++PAL G RNVL A++ +               E  +RL+ TS+ GA++G  + V
Sbjct:    3 TVLVTGGSGFVAAHLVRELLERGYRVHATVRSL------TATAKVAPLTALG----------------------------------EQHPGALRLFEADLMEDGSFDEAARGCSVVFHVASPFLMPEKIKDGQRDVVDPALTGTRNVLGAVERT---------------ESVRRLVFTSTVGAIFGDYSDV 138          
BLAST of EWM21041.1 vs. NCBI_GenBank
Match: gi|1057605691|ref|WP_068889671.1| (aldehyde reductase [Acinetobacter celticus] >gi|1055231394|gb|ODA11894.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Acinetobacter celticus])

HSP 1 Score: 103.605 bits (257), Expect = 4.302e-22
Identity = 59/193 (30.57%), Postives = 91/193 (47.15%), Query Frame = 0
Query:   78 VCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGADPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAVYGGPTAVPKSA 270
            + VTG  GY+AS ++K LLE+G+ VH TVR L+K      +  +  L K+                                    +  G L LF+A+L +PHSFD A++GC  V H+ASP V  +  D   D++EPA+ G  NVL ++ ++               E  KR+++TSS  + YG    + ++A
Sbjct:   10 ILVTGATGYIASWVIKNLLEQGHTVHATVRNLNK------KNSFAHLEKIA----------------------------------SESAGSLQLFQANLLEPHSFDQAMQGCEIVLHMASPFVVTNYKDAIKDIIEPAILGTENVLNSVNNT---------------ESVKRVVVTSSIASTYGDAIDIKQTA 147          
BLAST of EWM21041.1 vs. NCBI_GenBank
Match: gi|972433521|ref|WP_059042866.1| (cinnamyl alcohol dehydrogenase [Streptomyces acidiscabies] >gi|970395146|dbj|GAQ51096.1| UDP-glucose 4-epimerase [Streptomyces acidiscabies])

HSP 1 Score: 103.605 bits (257), Expect = 4.423e-22
Identity = 70/191 (36.65%), Postives = 92/191 (48.17%), Query Frame = 0
Query:   77 TVCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGA-DPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAVYGGPTAV 266
            TV VTG +G+VA+ LV++LLERGY VH TVR L          K  PL  LG                                  E+  G L LFEADL +  SFD A RGC+ VFHVASP +      D + D+++PAL G RNVL A++ +               E  +RL+ TS+ GA++G  + V
Sbjct:    3 TVLVTGGSGFVAAHLVRELLERGYRVHATVRSL------TATAKVAPLTALG----------------------------------EQHPGALRLFEADLMEDGSFDEAARGCSVVFHVASPFLMPEKIKDGQRDVVDPALTGTRNVLGAVERA---------------ESVRRLVFTSTVGAIFGDYSDV 138          
BLAST of EWM21041.1 vs. NCBI_GenBank
Match: gi|498045212|ref|WP_010359368.1| (cinnamyl-alcohol dehydrogenase [Streptomyces acidiscabies] >gi|1125625727|dbj|GAV38876.1| UDP-glucose 4-epimerase [Streptomyces acidiscabies])

HSP 1 Score: 102.064 bits (253), Expect = 1.591e-21
Identity = 68/186 (36.56%), Postives = 89/186 (47.85%), Query Frame = 0
Query:   77 TVCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGA-DPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAVYG 261
            TV VTG +G+VA+ LV++LLERGY VH TVR L          K  PL  LG                                  E+  G L LFEADL +  SFD   RGC+ VFHVASP +      D + D+++PAL G RNVL A++ +               E  +RL+ TS+ GA++G
Sbjct:    3 TVLVTGGSGFVAAHLVRELLERGYRVHATVRSL------TATAKVAPLTALG----------------------------------EQHPGALRLFEADLMEDGSFDEVARGCSVVFHVASPFLMPEKIKDGQRDVVDPALTGTRNVLGAVERA---------------ESVRRLVFTSTVGAIFG 133          
BLAST of EWM21041.1 vs. NCBI_GenBank
Match: gi|1199231162|gb|OUR98017.1| (diaminohydroxyphosphoribosylaminopyrimidine deaminase [Gammaproteobacteria bacterium 42_54_T18])

HSP 1 Score: 101.679 bits (252), Expect = 2.572e-21
Identity = 71/198 (35.86%), Postives = 90/198 (45.45%), Query Frame = 0
Query:   77 TVCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGRGRGGGGGGGQGERVGRHRKEDSRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGADPETDLLEPALEGVRNVLRAIQDSRREEGGREGGKEGGRERFKRLILTSSTGAVYGGPTAVPKSALEKG 274
            T  VTG NGY+AS LVK LLE+G+ VH TVR      ++  + K   L  L                            DE  G        LTLF ADL     FDA++ GC +VFH ASP +     DP+ +L++PAL+G RNVL        E   R           KR+ILTSS  A+YG    +   + EKG
Sbjct:    9 TALVTGANGYIASWLVKYLLEQGFTVHATVR------DKTNQNKVSHLQTL---------------------------IDEHPGK-------LTLFNADLFNNGDFDASMEGCEFVFHTASPFIIRGLNDPQAELIDPALKGTRNVL--------ESANRT-------HSVKRVILTSSVVAIYGD--YIDMQSTEKG 149          
The following BLAST results are available for this feature:
BLAST of EWM21041.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101053|gb|EWM21041.1|0.000e+0100.00dihydrokaempferol 4-reductase, partial [Nannochlor... [more]
gi|1181018501|ref|WP_084431546.1|8.215e-2439.57cinnamyl alcohol dehydrogenase [Kibdelosporangium ... [more]
gi|1191640710|gb|OTF92712.1|1.497e-2338.25putative NAD(P)-binding domain-containing protein ... [more]
gi|518971674|ref|WP_020127549.1|5.321e-2340.32cinnamyl-alcohol dehydrogenase [Streptomyces sp. 3... [more]
gi|1086271254|emb|SDB91048.1|3.657e-2232.12dihydroflavonol-4-reductase/hypothetical protein [... [more]
gi|913090897|ref|WP_050373227.1|4.036e-2236.65cinnamyl-alcohol dehydrogenase [Streptomyces acidi... [more]
gi|1057605691|ref|WP_068889671.1|4.302e-2230.57aldehyde reductase [Acinetobacter celticus] >gi|10... [more]
gi|972433521|ref|WP_059042866.1|4.423e-2236.65cinnamyl alcohol dehydrogenase [Streptomyces acidi... [more]
gi|498045212|ref|WP_010359368.1|1.591e-2136.56cinnamyl-alcohol dehydrogenase [Streptomyces acidi... [more]
gi|1199231162|gb|OUR98017.1|2.572e-2135.86diaminohydroxyphosphoribosylaminopyrimidine deamin... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9663rna9663Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications