|
|
Properties
| Property Name | Value |
|---|
| Product | atp-binding sub-family g member 2d |
| Orig transcript id | gnl|cribi|Naga_101482g1.953.mrna |
| Orig protein id | gnl|cribi|Naga_101482g1.953 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037255.1 | supercontig | KK037255.1:83908..85749 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9660 ID=rna9660|Name=rna9660|organism=Nannochloropsis gaditana|type=mRNA|length=584bp
TAAAACAGCTAGGGCAGGACATGGATAGAGCGTCCTTTGAAGGGAACGAC
AGGCAGGAGGGTGGAATATCTGGTATTGTGCGGCATCATGAAAAAGATCA
AGGAGGGGCCGGTCGAAGCCCGGCTCGAGCCCCCGGCCCACGGCACCAGC
ACCCCCCTCCTCAAATACCAGAGGCGCACGCATCGCAACAAGAGCAGGAG
AAAATTCCATTCCTATCGCCAGAAAGCGGGGACTGCGACTGTCAGGTGCA
GGGCTCGGAGGCAGAAGAACGGGAGGAGGACCCTGGTGAGGAGGACGAAG
GAGCTGCGGTTCGTATCACGGTCACCGCGGACAATGTGTCCTACTACCTT
CCTCCCCGCTGCCCTTCCCTTTCCTCCTGCCTCCCTGCTTTCCTCCTCCC
TCCCTCCCACCGGACCCGAAGGTCAGTGACCGGGAAGCGACAGCTCACGG
GCAAGGCGCTGCTGCAGAACGTGACGTTCCAAGTCACTCCTGGGCGCCTT
ACCTACATCATGGGTCCGTCTGGGGCGGGTAAAAGCACTTTGTTGAACCT
CCTGGCTCGTCGATTGAAGCGGGGGTCGATGGGG back to topprotein sequence of rna9660 >rna9660-protein ID=rna9660-protein|Name=rna9660|organism=Nannochloropsis gaditana|type=polypeptide|length=345bp
METLSQYFFWRPVFVHELNSHTYSPLSFLLASPLTLLPWVGSAYLLFLFL
SFLMADIPTPFFPSFLLPLLLIYLVLLTTYFLTLGLCARLKRPELAYVLT
PITFVIMGSLTGFMVIPSQTPFLWQQIQRVLYTRWAYRGVVLLLFASRPD
KAAVLDRLGFEFKFEGEREEIGTCFAVVLGWCLLLGSGEMMAVMGPSGSG
KSTFLDVLAGRKTQGRVGGQVVWEAGEQAGGRCRWAYVTQEDVHLPSLTV
RETLWYAALLRLEESVGPQTRLARVEALEGMLGLSEVRDTSVGGAGFKNP
LSGGERRRLSVGVEIIDLPTVLLGDEVTTGLDSATALEVLGVGGM back to topmRNA from alignment at KK037255.1:83908..85749+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9660 ID=rna9660|Name=rna9660|organism=Nannochloropsis gaditana|type=mRNA|length=1842bp|location=Sequence derived from alignment at KK037255.1:83908..85749+ (Nannochloropsis gaditana)
ATGGAAACGCTCTCCCAGTATTTCTTCTGGCGCCCTGTCTTCGTCCACGA
GCTCAACAGCCACACCtactcccctctctccttcctcctcgcctcccccc
tcaccctcctaCCCTGGGTGGGCTCggcctacctcctcttcctcttcctc
tccttcctgatgGCCGACATCCCCACCccgttctttccctcctttctcct
ccccctcctcctcatctacctcgtccttctcacCACCTACTTCCTCACGC
TGGGCCTCTGTGCCCGGTTGAAACGTCCGGAGCTTGCCTACGTCCTAACA
CCCATCACCTTCGTCATCATGGGCTCTTTGACAggtctttctctccctcc
ctccctccctccctccctccctccctccctctatctCCCTGCTGCCGTTT
CGGTTTGCCGTCTATCCTGAGCTCCCTTCGGAATCAAAATTTTAAATTCA
GGATTTCGCACGGACGCGTGTTCCCCTTCCTACAGGTTTCATGGTCATCC
CCTCCCAGACCCCCTTCCTGTGGCAGCAGATCCAACGTGTCCTCTACACT
CGCTGGGCTTACCGCGGcgtggtcctcctcctcttcgcctcccgtCCGGA
CAAGGCGGCCGTTTTGGACCGTTTGGGATTTGAATTCAAATttgaagggg
agagggaggagattgGGACCTGTTTTGCGGTGGTGCTGGGGTGGTGTTTG
CTCTTGGGTACACACGCGTATTGGAGTATCCGCCCCTCAGTCCCCCGCCT
GAGGCGGGTCGGCcttgcggagggagggagggtgggagggtgggagggag
ggaggggggaagcaggagacgAAGATTTGAAGGCGCCGTTGCTGGGACCG
TTGGGAGGGGTCTCCTtgggggaatggggggggggaagaggaaagggaca
tGGAGAGCGGgtgggtgggcggggagggagggacggaggaagggacggag
gaagggacgaagggagggaggaacgaatTGAGCTGGAAGGATTTgcgaag
gcgggcggcgaggaTGCCGAGGGAGCAGAGGACGGGACGCTTGCTCTTCC
GAGGCATCACCTACTCGGTGCCTTGtcgacgggcgggggggaagggaggg
caagagatcgaggaggggggaggggagaagccACCAGGGGATCTTCCAGA
TTCCCCAGGCgggggacgaaggcgggggtgggcgtggagggggaggagag
ggaggacgggggggaggacccTCCGGCTGTTGCAGGGAGGGATCACGGGG
GCGGTAGGGAGCGGGGAGATGATGGCAGTCATGGGCCCGTCCGGGTCTGG
GAAGTCCACCTTCCTGGACGTGTTGGCGGGGCGGAAGACgcaggggaggg
tgggggggcaggtggtgtgggaggcgggggaacaGGCCGGTGGCCGGTGC
CGATGGGCCTACGTGAcgcaggaggacgtgcacTTGCCCAGCCTGACGGT
ACGAGAAACACTGTGGTACGCGGCCTTGCTGCGGTTGGAGGAAAGCGTGG
GGCCACAGACGCGGCTGGCGCGTGTGGAGGCGCTAGAGGGCATGTTGGGC
TTGAGTGAGGTCCGAGACACCAgcgtgggaggggccggCTTCAAAAATCC
CTTAAGCGGGGGAGAACGGCGGCGGTTGAGCGTCGGGGTGGAGATCATCG
ACCTACCGACAGTCCTTCTCGGGGACGAGGTGACCACGGGTTTGGATTCT
GCCACGGCGCTGGAGGTCCTGGGGGTGTGGAAGGGActgacggagggcgg
gcgggtggGGATGGTCACCATCCATCAGCCTGCCCCGGAGGCCTTTGCCT
TGTtcgattccctcctcctcttggcgCAGGGGGGGCATGTGA back to topCoding sequence (CDS) from alignment at KK037255.1:83908..85749+ >rna9660 ID=rna9660|Name=rna9660|organism=Nannochloropsis gaditana|type=CDS|length=4152bp|location=Sequence derived from alignment at KK037255.1:83908..85749+ (Nannochloropsis gaditana)
ATGGAAACGCTCTCCCAGTATTTCTTCTGGCGCCCTGTCTTCGTCCACGA
GCTCAACAGCCACACCtactcccctctctccttcctcctcgcctcccccc
tcaccctcctaCCCTGGGTGGGCTCggcctacctcctcttcctcttcctc
tccttcctgatgGCCGACATCCCCACCccgttctttccctcctttctcct
ccccctcctcctcatctacctcgtccttctcacCACCTACTTCCTCACGC
TGGGCCTCTGTGCCCGGTTGAAACGTCCGGAGCTTGCCTACGTCCTAACA
CCCATCACCTTCGTCATCATGGGCTCTTTGACAgGTTTCATGGTCATCCC
CTCCCAGACCCCCTTCCTGTGGCAGCAGATCCAACGTGTCCTCTACACTC
GCTGGGCTTACCGCGGcgtggtcctcctcctcttcgcctcccgtCCGGAC
AAGGCGGCCGTTTTGGACCGTTTGGGATTTGAATTCAAATttgaagggga
gagggaggagattgGGACCTGTTTTGCGGTGGTGCTGGGGTGGTGTTTGC
TCTTGGGGAGCGGGGAGATGATGGCAGTCATGGGCCCGTCCGGGTCTGGG
AAGTCCACCTTCCTGGACGTGTTGGCGGGGCGGAAGACgcaggggagggt
gggggggcaggtggtgtgggaggcgggggaacaGGCCGGTGGCCGGTGCC
GATGGGCCTACGTGAcgcaggaggacgtgcacTTGCCCAGCCTGACGGTA
CGAGAAACACTGTGGTACGCGGCCTTGCTGCGGTTGGAGGAAAGCGTGGG
GCCACAGACGCGGCTGGCGCGTGTGGAGGCGCTAGAGGGCATGTTGGGCT
TGAGTGAGGTCCGAGACACCAgcgtgggaggggccggCTTCAAAAATCCC
TTAAGCGGGGGAGAACGGCGGCGGTTGAGCGTCGGGGTGGAGATCATCGA
CCTACCGACAGTCCTTCTCGGGGACGAGGTGACCACGGGTTTGGATTCTG
CCACGGCGCTGGAGGTCCTGGGGGTGGGGGGCATGTGAATGGAAACGCTC
TCCCAGTATTTCTTCTGGCGCCCTGTCTTCGTCCACGAGCTCAACAGCCA
CACCtactcccctctctccttcctcctcgcctcccccctcaccctcctaC
CCTGGGTGGGCTCggcctacctcctcttcctcttcctctccttcctgatg
GCCGACATCCCCACCccgttctttccctcctttctcctccccctcctcct
catctacctcgtccttctcacCACCTACTTCCTCACGCTGGGCCTCTGTG
CCCGGTTGAAACGTCCGGAGCTTGCCTACGTCCTAACACCCATCACCTTC
GTCATCATGGGCTCTTTGACAgGTTTCATGGTCATCCCCTCCCAGACCCC
CTTCCTGTGGCAGCAGATCCAACGTGTCCTCTACACTCGCTGGGCTTACC
GCGGcgtggtcctcctcctcttcgcctcccgtCCGGACAAGGCGGCCGTT
TTGGACCGTTTGGGATTTGAATTCAAATttgaaggggagagggaggagat
tgGGACCTGTTTTGCGGTGGTGCTGGGGTGGTGTTTGCTCTTGGGGAGCG
GGGAGATGATGGCAGTCATGGGCCCGTCCGGGTCTGGGAAGTCCACCTTC
CTGGACGTGTTGGCGGGGCGGAAGACgcaggggagggtgggggggcaggt
ggtgtgggaggcgggggaacaGGCCGGTGGCCGGTGCCGATGGGCCTACG
TGAcgcaggaggacgtgcacTTGCCCAGCCTGACGGTACGAGAAACACTG
TGGTACGCGGCCTTGCTGCGGTTGGAGGAAAGCGTGGGGCCACAGACGCG
GCTGGCGCGTGTGGAGGCGCTAGAGGGCATGTTGGGCTTGAGTGAGGTCC
GAGACACCAgcgtgggaggggccggCTTCAAAAATCCCTTAAGCGGGGGA
GAACGGCGGCGGTTGAGCGTCGGGGTGGAGATCATCGACCTACCGACAGT
CCTTCTCGGGGACGAGGTGACCACGGGTTTGGATTCTGCCACGGCGCTGG
AGGTCCTGGGGGTGGGGGGCATGTGAATGGAAACGCTCTCCCAGTATTTC
TTCTGGCGCCCTGTCTTCGTCCACGAGCTCAACAGCCACACCtactcccc
tctctccttcctcctcgcctcccccctcaccctcctaCCCTGGGTGGGCT
CggcctacctcctcttcctcttcctctccttcctgatgGCCGACATCCCC
ACCccgttctttccctcctttctcctccccctcctcctcatctacctcgt
ccttctcacCACCTACTTCCTCACGCTGGGCCTCTGTGCCCGGTTGAAAC
GTCCGGAGCTTGCCTACGTCCTAACACCCATCACCTTCGTCATCATGGGC
TCTTTGACAgGTTTCATGGTCATCCCCTCCCAGACCCCCTTCCTGTGGCA
GCAGATCCAACGTGTCCTCTACACTCGCTGGGCTTACCGCGGcgtggtcc
tcctcctcttcgcctcccgtCCGGACAAGGCGGCCGTTTTGGACCGTTTG
GGATTTGAATTCAAATttgaaggggagagggaggagattgGGACCTGTTT
TGCGGTGGTGCTGGGGTGGTGTTTGCTCTTGGGGAGCGGGGAGATGATGG
CAGTCATGGGCCCGTCCGGGTCTGGGAAGTCCACCTTCCTGGACGTGTTG
GCGGGGCGGAAGACgcaggggagggtgggggggcaggtggtgtgggaggc
gggggaacaGGCCGGTGGCCGGTGCCGATGGGCCTACGTGAcgcaggagg
acgtgcacTTGCCCAGCCTGACGGTACGAGAAACACTGTGGTACGCGGCC
TTGCTGCGGTTGGAGGAAAGCGTGGGGCCACAGACGCGGCTGGCGCGTGT
GGAGGCGCTAGAGGGCATGTTGGGCTTGAGTGAGGTCCGAGACACCAgcg
tgggaggggccggCTTCAAAAATCCCTTAAGCGGGGGAGAACGGCGGCGG
TTGAGCGTCGGGGTGGAGATCATCGACCTACCGACAGTCCTTCTCGGGGA
CGAGGTGACCACGGGTTTGGATTCTGCCACGGCGCTGGAGGTCCTGGGGG
TGGGGGGCATGTGAATGGAAACGCTCTCCCAGTATTTCTTCTGGCGCCCT
GTCTTCGTCCACGAGCTCAACAGCCACACCtactcccctctctccttcct
cctcgcctcccccctcaccctcctaCCCTGGGTGGGCTCggcctacctcc
tcttcctcttcctctccttcctgatgGCCGACATCCCCACCccgttcttt
ccctcctttctcctccccctcctcctcatctacctcgtccttctcacCAC
CTACTTCCTCACGCTGGGCCTCTGTGCCCGGTTGAAACGTCCGGAGCTTG
CCTACGTCCTAACACCCATCACCTTCGTCATCATGGGCTCTTTGACAgGT
TTCATGGTCATCCCCTCCCAGACCCCCTTCCTGTGGCAGCAGATCCAACG
TGTCCTCTACACTCGCTGGGCTTACCGCGGcgtggtcctcctcctcttcg
cctcccgtCCGGACAAGGCGGCCGTTTTGGACCGTTTGGGATTTGAATTC
AAATttgaaggggagagggaggagattgGGACCTGTTTTGCGGTGGTGCT
GGGGTGGTGTTTGCTCTTGGGGAGCGGGGAGATGATGGCAGTCATGGGCC
CGTCCGGGTCTGGGAAGTCCACCTTCCTGGACGTGTTGGCGGGGCGGAAG
ACgcaggggagggtgggggggcaggtggtgtgggaggcgggggaacaGGC
CGGTGGCCGGTGCCGATGGGCCTACGTGAcgcaggaggacgtgcacTTGC
CCAGCCTGACGGTACGAGAAACACTGTGGTACGCGGCCTTGCTGCGGTTG
GAGGAAAGCGTGGGGCCACAGACGCGGCTGGCGCGTGTGGAGGCGCTAGA
GGGCATGTTGGGCTTGAGTGAGGTCCGAGACACCAgcgtgggaggggccg
gCTTCAAAAATCCCTTAAGCGGGGGAGAACGGCGGCGGTTGAGCGTCGGG
GTGGAGATCATCGACCTACCGACAGTCCTTCTCGGGGACGAGGTGACCAC
GGGTTTGGATTCTGCCACGGCGCTGGAGGTCCTGGGGGTGGGGGGCATGT
GA back to top
|