rna965, rna965 (mRNA) Nannochloropsis gaditana

Overview
Namerna965
Unique Namerna965
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1068
Alignment locationCM002456.1:849535..850810 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100124g13.8340.mrna
Orig protein idgnl|cribi|Naga_100124g13.8340
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:849535..850810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100124g13gene928Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna965rna965-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29719.1cds965Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna965 ID=rna965|Name=rna965|organism=Nannochloropsis gaditana|type=mRNA|length=1068bp
ATGTCCTTTTTTCGTGCTGGGAAACGGTGTGCGGCGTCTTTCGGTGCCCG
GGCCCTGCCACCGACCATGATAGTGGGTCTGGCGGTGACGGCAGAGTACT
ACAATCAAGGGCTGCAGAACTATTCCACAACGTTATGCGATGCCGCCGTT
GTAAACAACGAAGACACGTCTATTGAAGTACCAGCTTTGGTGAAGCAGGC
AGAGGAGGAAAGACGGAAGGTGGCGCAGCTCAAAAATCCGGGGTCTTTTG
AAAAACTGATAGAGGATGGCAAGAGATTATCTTCGGTAGACAGCTTCGAG
GGATTTCGTCTGGAAGTGCAAAAGATGGTTACGCCACATTTTTACTTAGC
ACATTCATTCATGTTGGGCGTAAAGCTTCCGCAAGTGGATACCAACGCGC
TTTACGATTTCTCGACGCATGTCGTATTGCCAGGTAATCAGCTCATCATG
GCACGGATGGGCCACGCGGGATCAATGGACGGCAGAATCCACTTTGGTCT
GGGCGAAAACACTCTGGTTAAAGTGATAGCGAGCCTGCAGCCCAATGCCG
CTAAAGACACCTATCAGGTTGACGCGGAGCGCCACGGCAGGGATCACTCC
TTGACCTTTCGCCTGTCCAAGGGGCCACAGCTGTACGCATCCTACCTCCA
GAGCATCACGCCGGGCCTCGCGTTGGGCGGGGACACTTTGTTCGATTTCG
CAGAGGGTGGAGGGGTCTTCAGCCTCGGCGGCAAGTACACGGGCCCCGAC
TGGGTGGGCGTTGCGATGCTGGCCCAGTACGGTCAGATCTGTCTCCTCCA
GTACATCAAGCACGTGAGCCCCGGCCGCATGGCCTTAGTGGCTGATCTTG
TGCTGAATCCTCTCACGCTTGACAGCCAGACCGTGCTCGGTGCGGAAGTC
AACATGAAACAGTCGCGCTTCCTGACCACCGTTGACAACGGTGGCAAGAT
CGCCGCCCTCCTCGAGGCGCGCGTCGTGCCCAATGCGGTCACCCTCCTGC
TCTCCGGCGAAGTGGATGGCGTGAAAGACGAATACAAGTTTGGGTACGGC
TTCCAATTGAACTTGTAA
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protein sequence of rna965

>rna965-protein ID=rna965-protein|Name=rna965|organism=Nannochloropsis gaditana|type=polypeptide|length=246bp
MLRLALRPGDADTFMNRIVGCGLMMLTIVQGYNLGGKSTINRLGSRQMQR
QNIFTSYSASSNNFYSSSFQPLGAPPRTIEQEEGFSLGLQAEKSGGQFEE
YVVNVSKPLGVAVEEAGDGSGMVYVVEANEKAQAAGVEVGDVIVGCSFIF
DDSYLVNVTGKGVERVESLIRSRGPDYVCLRLRKGCDYHLLERGDLDARR
ETYDDEATLEPEEQEARWIRRAESIFIDEWGWQTPEGEGDEEQENW
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mRNA from alignment at CM002456.1:849535..850810-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna965 ID=rna965|Name=rna965|organism=Nannochloropsis gaditana|type=mRNA|length=1276bp|location=Sequence derived from alignment at CM002456.1:849535..850810- (Nannochloropsis gaditana)
CACAGAGAGGGCTCTCTGGATACTGTACCTGCACATGCTCCGCCTGGCCT
TGCGACCCGGCGACGCGGACACATTTATGAATAGGATCGTCGGATGTGGC
CTAATGATGCTCACGATTGTCCAGGGGTACAACCTAGGTGGCAAGAGCAC
TATCAATAGGCTAGGATCCCGTCAGATGCAACGGCAGAATATTTTCACAT
CATATTCGGCGTCATCGAATAACTTTTACAGCAGCTCTTTTCAACGTAAG
TCTTCATGACCTATTCCTACCGTGTTGCCTTCCCACTCAAAAGGGTGACC
GTTTTGATACTCATGGACCAAAAAATGTCTTCATGTGATTAAAGGAATAT
GGGCAGTACTTGTGTAAGCAATATTTGTTTGTCATCGAAGAGTCATACGA
TATATCGGCTTAAGCCATACGTCTAGATGCCATGTCGTTGATAATGGCAC
GGCTCAGAATTACGAGAGTGAACAAATTGTTAGGTGAGCCCAGCCTGTTT
GGAAGGAATCACAACCAAGCACTTCAAATCCTCCGCGCAAATGACAGCCT
TGGGGGCCCCGCCAAGAACAATTGAGCAGGAGGAAGGTTTCTCGCTCGGC
TTGCAGGCGGAGAAATCGGGGGGGCAGTTTGAGGTTGGTATCTGTATAAT
TCCTTCCGATTGGACATATCATTTTGAACCGTGCATAAATGACAACGACG
AGCAATGATTGAGCCCAAGCCTTTCCATTCTCTCACACCTGTGTCATACG
AAGGAGTACGTTGTCAACGTGAGCAAGCCTTTGGGTGTGGCAGTCGAGGA
GGCGGGAGACGGCTCTGGTATGGTGTACGTGGTAGAGGCGAACGAGAAGG
CCCAGGCAGCTGGAGTCGAAGTCGGCGACGTTATAGTGGGATGCTCCTTC
ATATTTGATGACTCTTACCTGGTGAACGTGACGGGCAAGGGCGTGGAGCG
GGTTGAGTCACTCATTCGCTCCCGGGGGCCTGACTACGTTTGCCTGCGTC
TGCGCAAAGGGTGTGACTACCATCTCCTCGAGAGGGGGGACCTTGACGCG
CGGCGAGAAACATATGATGATGAGGCGACCCTTGAGCCTGAGGAGCAGGA
GGCGCGGTGGATCCGCCGAGCAGAAAGCATTTTCATAGACGAGTGGGGCT
GGCAGACCCCGGAGGGAGAGGGGGACGAAGAGCAAGAGAACTGGTAACGT
GGCATAATGAAGAGTAGCACGAAATGTAAACGACGGTAAAACACTATCTC
TCGTGCATTTACGAATTCTTCAGAGA
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Coding sequence (CDS) from alignment at CM002456.1:849535..850810-

>rna965 ID=rna965|Name=rna965|organism=Nannochloropsis gaditana|type=CDS|length=2223bp|location=Sequence derived from alignment at CM002456.1:849535..850810- (Nannochloropsis gaditana)
GAGTACGTTGTCAACGTGAGCAAGCCTTTGGGTGTGGCAGTCGAGGAGGC
GGGAGACGGCTCTGGTATGGTGTACGTGGTAGAGGCGAACGAGAAGGCCC
AGGCAGCTGGAGTCGAAGTCGGCGACGTTATAGTGGGATGCTCCTTCATA
TTTGATGACTCTTACCTGGTGAACGTGACGGGCAAGGGCGTGGAGCGGGT
TGAGTCACTCATTCGCTCCCGGGGGCCTGACTACGTTTGCCTGCGTCTGC
GCAAAGGGTGTGACTACCATCTCCTCGAGAGGGGGGACCTTGACGCGCGG
CGAGAAACATATGATGATGAGGCGACCCTTGAGCCTGAGGAGCAGGAGGC
GCGGTGGATCCGCCGAGCAGAAAGCATTTTCATAGACGAGTGGGGCTGGC
AGACCCCGGAGGGAGAGGGGGACGAAGAGCAAGAGAACTGGTAACCTTGG
GGGCCCCGCCAAGAACAATTGAGCAGGAGGAAGGTTTCTCGCTCGGCTTG
CAGGCGGAGAAATCGGGGGGGCAGTTTGAGATGCTCCGCCTGGCCTTGCG
ACCCGGCGACGCGGACACATTTATGAATAGGATCGTCGGATGTGGCCTAA
TGATGCTCACGATTGTCCAGGGGTACAACCTAGGTGGCAAGAGCACTATC
AATAGGCTAGGATCCCGTCAGATGCAACGGCAGAATATTTTCACATCATA
TTCGGCGTCATCGAATAACTTTTACAGCAGCTCTTTTCAACGAGTACGTT
GTCAACGTGAGCAAGCCTTTGGGTGTGGCAGTCGAGGAGGCGGGAGACGG
CTCTGGTATGGTGTACGTGGTAGAGGCGAACGAGAAGGCCCAGGCAGCTG
GAGTCGAAGTCGGCGACGTTATAGTGGGATGCTCCTTCATATTTGATGAC
TCTTACCTGGTGAACGTGACGGGCAAGGGCGTGGAGCGGGTTGAGTCACT
CATTCGCTCCCGGGGGCCTGACTACGTTTGCCTGCGTCTGCGCAAAGGGT
GTGACTACCATCTCCTCGAGAGGGGGGACCTTGACGCGCGGCGAGAAACA
TATGATGATGAGGCGACCCTTGAGCCTGAGGAGCAGGAGGCGCGGTGGAT
CCGCCGAGCAGAAAGCATTTTCATAGACGAGTGGGGCTGGCAGACCCCGG
AGGGAGAGGGGGACGAAGAGCAAGAGAACTGGTAACCTTGGGGGCCCCGC
CAAGAACAATTGAGCAGGAGGAAGGTTTCTCGCTCGGCTTGCAGGCGGAG
AAATCGGGGGGGCAGTTTGAGATGCTCCGCCTGGCCTTGCGACCCGGCGA
CGCGGACACATTTATGAATAGGATCGTCGGATGTGGCCTAATGATGCTCA
CGATTGTCCAGGGGTACAACCTAGGTGGCAAGAGCACTATCAATAGGCTA
GGATCCCGTCAGATGCAACGGCAGAATATTTTCACATCATATTCGGCGTC
ATCGAATAACTTTTACAGCAGCTCTTTTCAACGAGTACGTTGTCAACGTG
AGCAAGCCTTTGGGTGTGGCAGTCGAGGAGGCGGGAGACGGCTCTGGTAT
GGTGTACGTGGTAGAGGCGAACGAGAAGGCCCAGGCAGCTGGAGTCGAAG
TCGGCGACGTTATAGTGGGATGCTCCTTCATATTTGATGACTCTTACCTG
GTGAACGTGACGGGCAAGGGCGTGGAGCGGGTTGAGTCACTCATTCGCTC
CCGGGGGCCTGACTACGTTTGCCTGCGTCTGCGCAAAGGGTGTGACTACC
ATCTCCTCGAGAGGGGGGACCTTGACGCGCGGCGAGAAACATATGATGAT
GAGGCGACCCTTGAGCCTGAGGAGCAGGAGGCGCGGTGGATCCGCCGAGC
AGAAAGCATTTTCATAGACGAGTGGGGCTGGCAGACCCCGGAGGGAGAGG
GGGACGAAGAGCAAGAGAACTGGTAACCTTGGGGGCCCCGCCAAGAACAA
TTGAGCAGGAGGAAGGTTTCTCGCTCGGCTTGCAGGCGGAGAAATCGGGG
GGGCAGTTTGAGATGCTCCGCCTGGCCTTGCGACCCGGCGACGCGGACAC
ATTTATGAATAGGATCGTCGGATGTGGCCTAATGATGCTCACGATTGTCC
AGGGGTACAACCTAGGTGGCAAGAGCACTATCAATAGGCTAGGATCCCGT
CAGATGCAACGGCAGAATATTTTCACATCATATTCGGCGTCATCGAATAA
CTTTTACAGCAGCTCTTTTCAAC
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Synonyms
Publications