EWM29719.1, cds965 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29719.1 vs. NCBI_GenBank
Match: gi|585112297|gb|EWM29719.1| (hypothetical protein Naga_100124g13 [Nannochloropsis gaditana]) HSP 1 Score: 504.597 bits (1298), Expect = 1.037e-180 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
Query: 1 MLRLALRPGDADTFMNRIVGCGLMMLTIVQGYNLGGKSTINRLGSRQMQRQNIFTSYSASSNNFYSSSFQPLGAPPRTIEQEEGFSLGLQAEKSGGQFEEYVVNVSKPLGVAVEEAGDGSGMVYVVEANEKAQAAGVEVGDVIVGCSFIFDDSYLVNVTGKGVERVESLIRSRGPDYVCLRLRKGCDYHLLERGDLDARRETYDDEATLEPEEQEARWIRRAESIFIDEWGWQTPEGEGDEEQENW 246
MLRLALRPGDADTFMNRIVGCGLMMLTIVQGYNLGGKSTINRLGSRQMQRQNIFTSYSASSNNFYSSSFQPLGAPPRTIEQEEGFSLGLQAEKSGGQFEEYVVNVSKPLGVAVEEAGDGSGMVYVVEANEKAQAAGVEVGDVIVGCSFIFDDSYLVNVTGKGVERVESLIRSRGPDYVCLRLRKGCDYHLLERGDLDARRETYDDEATLEPEEQEARWIRRAESIFIDEWGWQTPEGEGDEEQENW
Sbjct: 1 MLRLALRPGDADTFMNRIVGCGLMMLTIVQGYNLGGKSTINRLGSRQMQRQNIFTSYSASSNNFYSSSFQPLGAPPRTIEQEEGFSLGLQAEKSGGQFEEYVVNVSKPLGVAVEEAGDGSGMVYVVEANEKAQAAGVEVGDVIVGCSFIFDDSYLVNVTGKGVERVESLIRSRGPDYVCLRLRKGCDYHLLERGDLDARRETYDDEATLEPEEQEARWIRRAESIFIDEWGWQTPEGEGDEEQENW 246
BLAST of EWM29719.1 vs. NCBI_GenBank
Match: gi|298709634|emb|CBJ31443.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 71.633 bits (174), Expect = 7.159e-11 Identity = 32/84 (38.10%), Postives = 56/84 (66.67%), Query Frame = 0
Query: 102 VVNVSKPLGVAVEEAGDGSGMVYVVEANEKAQAAGVEVGDVIVGCSFIFDDSYLVNVTGKGVERVESLIRSRGPDYVCLRLRKG 185
+ N++KPLG+ +EE+ D + +VY+ +KA+AAG++VGDV+ G S +F D + +V K +E + SL+R R + +R+ +G
Sbjct: 202 IANMTKPLGITIEESTDKAQLVYLTSVGDKAEAAGLQVGDVLTGVSAVFGDE-VWSVKDKHIEEIRSLVRCRPEPFSLIRVERG 284
BLAST of EWM29719.1 vs. NCBI_GenBank
Match: gi|223996031|ref|XP_002287689.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976805|gb|EED95132.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 61.6178 bits (148), Expect = 1.510e-7 Identity = 50/177 (28.25%), Postives = 85/177 (48.02%), Query Frame = 0
Query: 24 MMLTIVQGYNLGGKSTINRLGSRQMQRQNIFTSYSASS------NNFYSSSFQPLGAPPRTIEQEEGFSLGLQAEKSGGQFEEYVVNVSKPLGVAVEEA----GDGSGMVYVVEANE--KAQAAGVEVGDVIVGCSFIFDDSYLVNVTGKGVERVESLIRSRGP-DYVCLRLRKGCD 187
+ LT + + L + S +QR F++ S+ S + ++SS +P + A K E+++ KPLG +VEE+ DG+ V++ + NE A+ AG+EVGDVI+ S FD++ VNV G+E++ SL+ R + + +R +G D
Sbjct: 16 LRLTSLTSFALA----LTIFASSHIQRAFGFSTPSSPSTRTAPLHTLHASSRKPTALQYSDFRPSDDLPTLTGALKDA-TVHEFILQNHKPLGCSVEESLAEEPDGAKYVFIAQVNEGGNAEKAGIEVGDVILQLSGTFDET--VNVASLGIEKIRSLVAGRPKENPLTIRTARGSD 185 The following BLAST results are available for this feature:
BLAST of EWM29719.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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