rna9648, rna9648 (mRNA) Nannochloropsis gaditana

Overview
Namerna9648
Unique Namerna9648
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1066
Alignment locationKK037255.1:53149..53756 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102995g1.5011.mrna
Orig protein idgnl|cribi|Naga_102995g1.5011
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:53149..53756 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102995g1gene9368Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9648rna9648-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21056.1cds9617Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9648 ID=rna9648|Name=rna9648|organism=Nannochloropsis gaditana|type=mRNA|length=1066bp
CTTCTTTCCTCATTTTTGACCCCTACTGTCCAGTGGGAAAGACGCGACGG
GGTTTGATCTTTCCGGCGCCATCATGGCAGAAGGTACTTTCAAGAAGGTC
AATTTCAAGGAGGCCGTTTTGAGCAAGGCCTACGCCAAGGCTGCAGATTT
CGAAGGCGCAGATTTCAGTAACGCGGTCGTCGATCGTGTCTCGTTCGACG
GGTCGAACCTGAAGGGCTCCATTTTTAGCAACGCCGTGCTCTCCGGTACC
TCCTTTGTCGGCGCGGATTTAACGGACAGCGATTTCACCGACACGTACAT
GGGAGAATTCAACTTGAGGGAGCTCTGCAAGAATCCGACGCTGAAGGGAA
CAAATCCGGTCACACAGGCCCCCACGAAGGAAAGTGCTGGCTGTAAATGA
AGGGAGTACTTGGGCTTTGGAGGGAGGGGAGAAGGGGAGGGAGGGTCTCC
AAAGGCATGAGCGCCCGACGGAAACAGAGGTGAAAAAAGGGACTTGGGCC
ACAGGGCAGGGACGTGGGAGATACACAAGGGCTCTCTGATGACCCCGCTG
CGCATGGAAGAGGTTAAAGTGAAATGTACGTTCACTGAGCCGAAGAGTCT
CTTGATGTTGTGAGCCTCGCATGCCGTGAAAATACCGACGCCTCTTCGCT
TGCAGACGTCACGGCCTTTGTTGTCATATAAGGCAGAAAGCGACCCCCCA
AAATAATGCCAATCGAGATGTTCACGCCACCGAAGGCCTTTTCTGGCTGG
CATCATGGCTTGATCACCATGCTGGACATCTCTCCGTGCTGAATACCGCC
GAGATTTTTTTCTTTTTTTCTATTTAAGGGGAAAGAAAGCGTGACCTCCA
TCAATACTTGTCTCCCAAAGGCGTACAGACGTCACTTTTCTGCCATTCTG
TCATCAACAGTATTCCTCGCCGCCTTCTCTCTACACGATGCGTGACCACC
ATGGTGTGACAACACGGACCTTGCCTTGTTGACTTTCACTGTCGCCAGGC
CTCTTTAAAAAACAAACGCATCGACAACGAACAATACAGAGGCTTGATAT
GTCGTTCGATGTTGCA
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protein sequence of rna9648

>rna9648-protein ID=rna9648-protein|Name=rna9648|organism=Nannochloropsis gaditana|type=polypeptide|length=162bp
RKGLCEKVTTHVTRLLTQSTPSPSPPPSLSPDSLAVLLKLEALLQALGTE
DMRVLSVLAPKYDQEGDRATVEAALRRVEVGGGFRLGLSNVVGGQGGALV
TLTLTLTLTLTLTLTLTLILTLTLTLTLTLLVDVPCTGGGGRAQYHPFLP
VDPLRTFSVVGA
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mRNA from alignment at KK037255.1:53149..53756+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9648 ID=rna9648|Name=rna9648|organism=Nannochloropsis gaditana|type=mRNA|length=608bp|location=Sequence derived from alignment at KK037255.1:53149..53756+ (Nannochloropsis gaditana)
AGGAAGGGTCTTTGTGAGAAGGTCACTACCCACGTCACCCGTCTCCTCAC
ACAatccaccccctctccctccccccctccctccctcagtccaGACTCGC
TGGCCGTGCTCCTCAAGCTGgaggccctcctccaggctctgGGCACCGAG
GACATGCGCGTCCTCTCTGTTTTGGCGCCCAAGTACGACCAGGAGGGTGA
CCGAGCCACCGTCGAAGCAGCCCTGCGACGCGTCGAGGTAGGTGGGGGGT
TCAGATTGGGGTTGAGTAATGTAGTGGGGGGTCAGGGTGGGGCGTTggta
accctaaccctaaccctaaccctaaccctaaccctaaccctaaccctaac
cctgatcctaaccctaaccctaaccctaaccctaacccttcTTGTGGACG
TACCCTGTactggtgggggaggaagggcacaGTAtcatcctttccttcct
gtaGACCCTCTCAGAACTTTTTCCGTAGTGGGAGCGTAGGCAGTtacttc
ccttcttccctccctcccttcatccctcctctcctttacACCCTCCCATC
CCACCGTTAAAAGACGCGTTCAGCTCCTGcatccctccttgccctctgtc
CTTCTCCG
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Coding sequence (CDS) from alignment at KK037255.1:53149..53756+

>rna9648 ID=rna9648|Name=rna9648|organism=Nannochloropsis gaditana|type=CDS|length=489bp|location=Sequence derived from alignment at KK037255.1:53149..53756+ (Nannochloropsis gaditana)
AGGAAGGGTCTTTGTGAGAAGGTCACTACCCACGTCACCCGTCTCCTCAC
ACAatccaccccctctccctccccccctccctccctcagtccaGACTCGC
TGGCCGTGCTCCTCAAGCTGgaggccctcctccaggctctgGGCACCGAG
GACATGCGCGTCCTCTCTGTTTTGGCGCCCAAGTACGACCAGGAGGGTGA
CCGAGCCACCGTCGAAGCAGCCCTGCGACGCGTCGAGGTAGGTGGGGGGT
TCAGATTGGGGTTGAGTAATGTAGTGGGGGGTCAGGGTGGGGCGTTggta
accctaaccctaaccctaaccctaaccctaaccctaaccctaaccctaac
cctgatcctaaccctaaccctaaccctaaccctaacccttcTTGTGGACG
TACCCTGTactggtgggggaggaagggcacaGTAtcatcctttccttcct
gtaGACCCTCTCAGAACTTTTTCCGTAGTGGGAGCGTAG
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Synonyms
Publications