rna9631, rna9631 (mRNA) Nannochloropsis gaditana

Overview
Namerna9631
Unique Namerna9631
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length531
Alignment locationKK037255.1:11405..13284 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101583g1.8470.mrna
Orig protein idgnl|cribi|Naga_101583g1.8470
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:11405..13284 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101583g1gene9350Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9631rna9631-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21073.1cds9600Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9631 ID=rna9631|Name=rna9631|organism=Nannochloropsis gaditana|type=mRNA|length=531bp
CCACAGGCAATGGTCACAAGAGACTATTTGTAGGACTGATAAGGTTTGTT
AGTCTGGCAACTTCATCCTATGCATAAGCTGCCCGTGATTGGGCGTCAAT
TTTCCATCACCTACATGCTTTGAAGCGAACACAAGAGTCAAGATGAAGCG
CGAGAAAGGAGCCAAACAATCAGCCTCAGGAAATCCAGCTCTCTATGAAC
CACCACCGTTCTCAAACCTGTCGGGCCCATACCCCTCCAGAAATGCGATA
CATCGAACCCGCATACCCTGTCGGCTGCTCATCCTATTCCTCTGCACCTT
GGTGGTGATGGGGATCCTTACACTACTCTTCATCACCTTACTGCCCGGTG
TCGTTTCTGACGGTATCAGAATTTCCCAACCCTATCTTCTCAACCACGAG
CCCCAAGTCGGGTCGGACGCGCCGTTTCCTCCTCTTGCAACGACCGCCAG
GCAGGGACCGAGCAGGTAAATAAAGAGACGAAGAGAAGCCATGCGATAAG
CGATACAGTGAAAGAGAGTGATCGCATATCC
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protein sequence of rna9631

>rna9631-protein ID=rna9631-protein|Name=rna9631|organism=Nannochloropsis gaditana|type=polypeptide|length=140bp
MEARQRKNLLGEDPGPALRSGRKDGLVQKLLLSLKTTGIPDESFFPTAGL
WLQEKAQAREKGLRLRILNLDLRYSNESHRRDLSYPGERAKLKHLGQTKN
KLWARKALTAKVTCEYTNDFLRLHHDCAPYEGMQPIIDVE
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mRNA from alignment at KK037255.1:11405..13284+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9631 ID=rna9631|Name=rna9631|organism=Nannochloropsis gaditana|type=mRNA|length=1880bp|location=Sequence derived from alignment at KK037255.1:11405..13284+ (Nannochloropsis gaditana)
ATGGAAGCACGTCAAAGGAAAAATTTGCTCGGAGAGGATCCAGGACCAGC
CCTGCGGTCTGGTCGCAAAGACGGTCTGGTTCAAAAATTCGAATTTCCGT
TGCTTCTCCGTTACTCCAGGTCCAGAAACTGTTACTCTCGTTGAAGACCA
CCGGGATCCCCGACGAGtcctttttccccaccgccGGGCTCTGGTTGCAG
GAGAAAGCGCAGGTAGGTGATatgatggaagaggtacCTTCGGGGAAGGG
CGATGACGTTTGTCCTTCACCTTGGTgatgatggaagaggtacCCACCAT
CGTGTACCGGGGGTTGGGGTCGGAGCGCCTCCAAAGCCTTTCATAACCAT
CCTCGTTATTCTCTGCCAAACGCATGCACGCGCTTTCCCcgagtgggagg
gatgagatcccgtccttcccataCCTTCTAGACGTGTTTCATCggtcttt
tctccctcccttgcccccccaggcccgcgAGAAAGGATTGAGGCTTCGGA
TTTTGAACTTGGACCTGAGATATAGCAATGAGAGTAAGGctgagagggga
gaggaaaggagggggcgggggagggggaggggaggtagcAAGCGAAGAGG
GCtgtaagggaggaggagaggcgtgGAGGGCCTTCAATCTCGGTGATTTT
CCTGCCATGTGTCGGTTAGAACAGACAGTGCATGCATGTGGATCATGTCT
GACCCCCCATACATATATACATaattatatatatatatcgGGGCTCCGTT
ACAGACACCCACGCCTTCTATCCCTCAGTAATGTTGCAACCACCTGTGAG
CGTCcgcccctcatccctccGATTAACGTCTCCTTGCCCcttaccctccc
ccccactaTCCTCCAGGCCACCGTCGGGACCTCAGCTACCCTGGAGAACG
AGCCAAACTCAAGCACTTGGGGCAAACCAAGAATAAACTCTGGGCCCGCA
AGGCGTTAACGGCCAAGGTgcgtcggaggaggggcggacgcgGGTATCGA
TCTCCCTTACCCTTTGTCCCACATTTTCGTGTgatgcccgccccgccctc
ttgctcccgtcGATATATGTGTATGATCTGGGCATTGTATTCCCCCCTCC
AGAGATAAGAGGGTCGccaggacggggcgggggggggggcatcgtcttcc
cttccctcccacagagGCATGCGTCCCTTCTTACCCATCCCAAACCCCGA
GGAGCTCAGACATTCTTGGACTCTGACTCCGCCCGTaagcatttccttcc
cctcaccGCTCTTCTCGTTTTTTCTCCCCGCAGGTAACCTGTGAATATAC
CAACGACTTCttgcgcctccaccacgactGTGCGCCCTACGAAGGGATGC
AGCCCATTATCGACGTCGAATGACCCCTTCGTGTGGACCCGGACAGGGAC
GGGTAGGATGTGGGGGGTCTGAAGGTCTTTTCCTTTGGCTTGGCGGGGAC
TGAGTCGACCCCTCTATGGAAGGAACCGCACGCGGGACgttggagaagga
cgggaaaaacgcaaagaagaaggactgAGAATCGAAGAAACAGAGAGTAT
GAGCAACGTGGTGCCACCGCAAGTCAAGCGGCTACACCAGACATCGATtg
ccggcgggggcggggtgTGATGTGCATGGAGGGTCGATGATGGAAGCGGA
AACAACTTTAAGGCTTCCATCATGTGTATGACCAATGATCGAAGAGAACG
CCAAGTTATGAATCCTGAGAAGAGGGGTGTGATGTGCATGGAGGGTCGCT
GATATAAGGGAACGCCAGGTTATGAATCCTGTCGGCTCGAGCTCTCCTGA
GAGTGGGATATTAGAAGGCTCGATGGCAGGTCTCAATCAATCCATAAATT
ATAACACACGAATACTGCAACAACACGTCC
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Coding sequence (CDS) from alignment at KK037255.1:11405..13284+

>rna9631 ID=rna9631|Name=rna9631|organism=Nannochloropsis gaditana|type=CDS|length=2115bp|location=Sequence derived from alignment at KK037255.1:11405..13284+ (Nannochloropsis gaditana)
ATGGAAGCACGTCAAAGGAAAAATTTGCTCGGAGAGGATCCAGGACCAGC
CCTGCGGTCTGGTCGCAAAGACGGTCTGGTCCAGAAACTGTTACTCTCGT
TGAAGACCACCGGGATCCCCGACGAGtcctttttccccaccgccGGGCTC
TGGTTGCAGGAGAAAGCGCAGgcccgcgAGAAAGGATTGAGGCTTCGGAT
TTTGAACTTGGACCTGAGATATAGCAATGAGAGCCACCGTCGGGACCTCA
GCTACCCTGGAGAACGAGCCAAACTCAAGCACTTGGGGCAAACCAAGAAT
AAACTCTGGGCCCGCAAGGCGTTAACGGCCAAGGTAACCTGTGAATATAC
CAACGACTTCttgcgcctccaccacgactGTGCGCCCTACGAAGGGATGC
AGCCCATTATCGACGTCGAATGAATGGAAGCACGTCAAAGGAAAAATTTG
CTCGGAGAGGATCCAGGACCAGCCCTGCGGTCTGGTCGCAAAGACGGTCT
GGTCCAGAAACTGTTACTCTCGTTGAAGACCACCGGGATCCCCGACGAGt
cctttttccccaccgccGGGCTCTGGTTGCAGGAGAAAGCGCAGgcccgc
gAGAAAGGATTGAGGCTTCGGATTTTGAACTTGGACCTGAGATATAGCAA
TGAGAGCCACCGTCGGGACCTCAGCTACCCTGGAGAACGAGCCAAACTCA
AGCACTTGGGGCAAACCAAGAATAAACTCTGGGCCCGCAAGGCGTTAACG
GCCAAGGTAACCTGTGAATATACCAACGACTTCttgcgcctccaccacga
ctGTGCGCCCTACGAAGGGATGCAGCCCATTATCGACGTCGAATGAATGG
AAGCACGTCAAAGGAAAAATTTGCTCGGAGAGGATCCAGGACCAGCCCTG
CGGTCTGGTCGCAAAGACGGTCTGGTCCAGAAACTGTTACTCTCGTTGAA
GACCACCGGGATCCCCGACGAGtcctttttccccaccgccGGGCTCTGGT
TGCAGGAGAAAGCGCAGgcccgcgAGAAAGGATTGAGGCTTCGGATTTTG
AACTTGGACCTGAGATATAGCAATGAGAGCCACCGTCGGGACCTCAGCTA
CCCTGGAGAACGAGCCAAACTCAAGCACTTGGGGCAAACCAAGAATAAAC
TCTGGGCCCGCAAGGCGTTAACGGCCAAGGTAACCTGTGAATATACCAAC
GACTTCttgcgcctccaccacgactGTGCGCCCTACGAAGGGATGCAGCC
CATTATCGACGTCGAATGAATGGAAGCACGTCAAAGGAAAAATTTGCTCG
GAGAGGATCCAGGACCAGCCCTGCGGTCTGGTCGCAAAGACGGTCTGGTC
CAGAAACTGTTACTCTCGTTGAAGACCACCGGGATCCCCGACGAGtcctt
tttccccaccgccGGGCTCTGGTTGCAGGAGAAAGCGCAGgcccgcgAGA
AAGGATTGAGGCTTCGGATTTTGAACTTGGACCTGAGATATAGCAATGAG
AGCCACCGTCGGGACCTCAGCTACCCTGGAGAACGAGCCAAACTCAAGCA
CTTGGGGCAAACCAAGAATAAACTCTGGGCCCGCAAGGCGTTAACGGCCA
AGGTAACCTGTGAATATACCAACGACTTCttgcgcctccaccacgactGT
GCGCCCTACGAAGGGATGCAGCCCATTATCGACGTCGAATGAATGGAAGC
ACGTCAAAGGAAAAATTTGCTCGGAGAGGATCCAGGACCAGCCCTGCGGT
CTGGTCGCAAAGACGGTCTGGTCCAGAAACTGTTACTCTCGTTGAAGACC
ACCGGGATCCCCGACGAGtcctttttccccaccgccGGGCTCTGGTTGCA
GGAGAAAGCGCAGgcccgcgAGAAAGGATTGAGGCTTCGGATTTTGAACT
TGGACCTGAGATATAGCAATGAGAGCCACCGTCGGGACCTCAGCTACCCT
GGAGAACGAGCCAAACTCAAGCACTTGGGGCAAACCAAGAATAAACTCTG
GGCCCGCAAGGCGTTAACGGCCAAGGTAACCTGTGAATATACCAACGACT
TCttgcgcctccaccacgactGTGCGCCCTACGAAGGGATGCAGCCCATT
ATCGACGTCGAATGA
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Synonyms
Publications