rna9626, rna9626 (mRNA) Nannochloropsis gaditana

Overview
Namerna9626
Unique Namerna9626
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length420
Alignment locationKK037254.1:316294..316797 -

Link to JBrowse

Properties
Property NameValue
ProductDehydrogenase, multihelical
Orig transcript idgnl|cribi|Naga_101286g1.1469.mrna
Orig protein idgnl|cribi|Naga_101286g1.1469
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:316294..316797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101286g1gene9345Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21078.1cds9595Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9626rna9626-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9626 ID=rna9626|Name=rna9626|organism=Nannochloropsis gaditana|type=mRNA|length=420bp
ATGTACACAAGAATGGCACGCCCGTGGTCAGAGATCTCATTCAGCCTTCG
ATCTACCTCCTCCCCCCCTCCTACTACGATCCCCTCCCCGGCTCGTCCCC
ATTCTAATATCATCACAAGCACCAGCGTACGGGACATGATGATGATGGCT
GGGCATTCGAAGTGGGCGAAGATAAAGCGAGCGAAAGGCTCCAACGACGC
CAAGCGGGCCATTCTCTTCACCAAGCTGGCGGTGGAATTGAGTGAAGCCT
CCCGGCAGGCCCAGGGGGACGTGACGGACATCCGTCTGGCCGCCGCCATC
AGTAAGGCAAAAGCCTGCAACGTGCCCAAAGACAACATCGAAGCCGCACT
CAAGAGGGGCGTGGAAGGGAAAGGCGGCGCCAATATGGAAGCGGTCCAGG
CTCCACCGCCATCATTGTAG
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protein sequence of rna9626

>rna9626-protein ID=rna9626-protein|Name=rna9626|organism=Nannochloropsis gaditana|type=polypeptide|length=156bp
PFLLPSLPFLSSLLSLSYAPSLPPLPPSLSPSLPPSLFPHAQRSGMLLYQ
AEHEEEGGGREGGREGGRERGKEGGYAYASLSASGAPLRNFLKDFSMIQA
AAKEGGLSLALTAATAREFERGRKEGLEEWDVAAVVKLVKGFEGGREGGG
EGGQGN
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mRNA from alignment at KK037254.1:316294..316797-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9626 ID=rna9626|Name=rna9626|organism=Nannochloropsis gaditana|type=mRNA|length=504bp|location=Sequence derived from alignment at KK037254.1:316294..316797- (Nannochloropsis gaditana)
CCTTTCCTCCTTCCTTCCCTCCCCTTCCTCTCCTCACTTCTATCGTTATC
TTACGCTCCATCCCTCCCTCCCCTCCCTCCCTCTCTCTCTCCCTCCCTCC
CTCCTTCCCTCTTTCCGCACGCTCAGCGTTCTGGTATGCTCCTCTATCAG
GCCGAGCACGAGGAGGAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGAGAGGGAAGGAGGGAGGCTACGCTTACGCCAGCTTGTCGGCAT
CGGGCGCCCCTCTGCGGAATTTTCTCAAGGATTTTTCCATGATCCAAGCC
GCCGCAAAAGAGGGAGGCCTGAGCTTAGCATTGACGGCGGCCACGGCCAG
GGAGTTCGAACGAGGGAGGAAGGAGGGTTTGGAGGAGTGGGATGTGGCTG
CCGTGGTGAAGCTTGTGAAGGGTTTTGAGGGAGGGAGGGAGGGAGGGGGG
GAGGGAGGGCAAGGGAACTGAAATAAAGAAGGAAATGGGCTGTGTAGGCA
TTTG
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Coding sequence (CDS) from alignment at KK037254.1:316294..316797-

>rna9626 ID=rna9626|Name=rna9626|organism=Nannochloropsis gaditana|type=CDS|length=471bp|location=Sequence derived from alignment at KK037254.1:316294..316797- (Nannochloropsis gaditana)
CCTTTCCTCCTTCCTTCCCTCCCCTTCCTCTCCTCACTTCTATCGTTATC
TTACGCTCCATCCCTCCCTCCCCTCCCTCCCTCTCTCTCTCCCTCCCTCC
CTCCTTCCCTCTTTCCGCACGCTCAGCGTTCTGGTATGCTCCTCTATCAG
GCCGAGCACGAGGAGGAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGAGAGGGAAGGAGGGAGGCTACGCTTACGCCAGCTTGTCGGCAT
CGGGCGCCCCTCTGCGGAATTTTCTCAAGGATTTTTCCATGATCCAAGCC
GCCGCAAAAGAGGGAGGCCTGAGCTTAGCATTGACGGCGGCCACGGCCAG
GGAGTTCGAACGAGGGAGGAAGGAGGGTTTGGAGGAGTGGGATGTGGCTG
CCGTGGTGAAGCTTGTGAAGGGTTTTGAGGGAGGGAGGGAGGGAGGGGGG
GAGGGAGGGCAAGGGAACTGA
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Synonyms
Publications