EWM21078.1, cds9595 (CDS) Nannochloropsis gaditana

Overview
NameEWM21078.1
Unique Namecds9595
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:316327..316797 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21078.1
ProductDehydrogenase, multihelical
Partialtrue
Orig transcript idgnl|cribi|Naga_101286g1.1469.mrna
GbkeyCDS
End range.
End range316797
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:316327..316797 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR0089276-PGluconate_DH_C-like
IPR0133286PGD_dom_2
Homology
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BLAST of EWM21078.1 vs. NCBI_GenBank
Match: gi|585101128|gb|EWM21078.1| (Dehydrogenase, multihelical, partial [Nannochloropsis gaditana])

HSP 1 Score: 298.516 bits (763), Expect = 3.350e-102
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 
Query:    1 PFLLPSLPFLSSLLSLSYAPSLPPLPPSLSPSLPPSLFPHAQRSGMLLYQAEHEEEGGGREGGREGGRERGKEGGYAYASLSASGAPLRNFLKDFSMIQAAAKEGGLSLALTAATAREFERGRKEGLEEWDVAAVVKLVKGFEGGREGGGEGGQGN 156
            PFLLPSLPFLSSLLSLSYAPSLPPLPPSLSPSLPPSLFPHAQRSGMLLYQAEHEEEGGGREGGREGGRERGKEGGYAYASLSASGAPLRNFLKDFSMIQAAAKEGGLSLALTAATAREFERGRKEGLEEWDVAAVVKLVKGFEGGREGGGEGGQGN
Sbjct:    1 PFLLPSLPFLSSLLSLSYAPSLPPLPPSLSPSLPPSLFPHAQRSGMLLYQAEHEEEGGGREGGREGGRERGKEGGYAYASLSASGAPLRNFLKDFSMIQAAAKEGGLSLALTAATAREFERGRKEGLEEWDVAAVVKLVKGFEGGREGGGEGGQGN 156
The following BLAST results are available for this feature:
BLAST of EWM21078.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101128|gb|EWM21078.1|3.350e-102100.00Dehydrogenase, multihelical, partial [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9626rna9626Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications