rna9624, rna9624 (mRNA) Nannochloropsis gaditana

Overview
Namerna9624
Unique Namerna9624
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length607
Alignment locationKK037254.1:312059..312825 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101517g1.10610.mrna
Orig protein idgnl|cribi|Naga_101517g1.10610
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:312059..312825 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101517g1gene9343Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21080.1cds9593Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9624rna9624-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9624 ID=rna9624|Name=rna9624|organism=Nannochloropsis gaditana|type=mRNA|length=607bp
CTCTCCCCCTCCTCCTTCCGCCACCTCCTGTGTCTGTCTCTTACCCGCCT
CCTCCCCTCTCCCCCCCTCCTTCCTCCTCCTTCCCTCCTCCTCAGGCTCT
CTCAACCCTTGCATCCTGAGGCGGCCGCCCTAGTCCGACAAATCTATCGG
CGCTGTTACTTGCTTCGGGCTGCTATGACCCTGCCGGAGGAGTCGGGGAC
CGTCGAGGAAGTGGCAGCAGTGGAGGACGAAGGAAAAAGGGAAGGGGAGA
AGGAGGGGGAAGGAGGGGAGGGAGGCGGACAAAAGGAGGTGCTGGCGAGG
TTGAACACTCTGATTGCCATCACCGGCATTTACTTCGAACAGGCGGAGGG
AGGTTTGGAAGTGGCGGTGGAACAGGTGGAGATGGAAGAAGGGGAGATGG
GGGAGGAAGAGGAGGAGGGAGAGTGGGGAGGGAATGAAGCGGAAAATGAA
GGCCCCATGCAGCCGGAGGAGGAGGAGGAAGAAGAGGAGGGGGAGATTCG
ATGAAGGAAAGGTGGAGGGCGACTAAACGCATTTCTCAAGCGAATCAAAG
CACGTAGAGTATTTCACACATCATCGCATAAATAAATAAGTCTTTGTTTT
GGTCGGG
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protein sequence of rna9624

>rna9624-protein ID=rna9624-protein|Name=rna9624|organism=Nannochloropsis gaditana|type=polypeptide|length=168bp
MTPRFNSPFARRRDHGRGNFRTFHTRDFDKARSGGTLTSQPIYPKRKHNT
NTKVPSIKASAVAPADMASNFSTESEMEKSPAKLGLKEEEYDRLVHVHAF
RQRHLRTMTGVGRREQRLRRLHIDRAIAGSGEKGAYLCELPEKDEVRGRV
SHPNSPFTLSPLFCVQGS
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mRNA from alignment at KK037254.1:312059..312825-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9624 ID=rna9624|Name=rna9624|organism=Nannochloropsis gaditana|type=mRNA|length=767bp|location=Sequence derived from alignment at KK037254.1:312059..312825- (Nannochloropsis gaditana)
ATGACTCCCCGTTTCAATTCCCCATTTGCACGCAGACGGGATCATGGCCG
TGGAAACTTCCGCACATTCCACACCCGAGACTTTGACAAAGCACGCAGCG
GAGGGACCTTAACATCGCAGCCCATATACCCCAAACGAAAGCACAACACA
AACACCAAAGTACCCAGTATAAAAGCTTCCGCTGTCGCGCCAGCAGATAT
GGCGTCCAATTTCTCCACAGAATCAGAAATGGAAAAGTCTCCGGCCAAGT
TGGGTTTAAAAGAGGAGGAATACGATCGCTTGGTGCATGTGCACGCCTTC
CGCCAGCGCCACCTCCGGACAATGACTGGGGTAGGGCGACGAGAACAGAG
ACTCCGTCGACTACACATTGACAGAGCAATAGCGGGCAGCGGGGAAAAAG
GCGCATATCTGTGCGAGCTCCCCGAGAAAGATGAGGTGCGGGGCAGGGTT
TCCCACCCAAACAGTCCTTTCACCCTATCCCCTCTCTTCTGTGTTCAGGG
ATCTTGAATCCTCTCCCTCCTCTTCTGCTCATAACTCGCTCCCCTCAAGC
AACCTGCGTAGGAGGCTCAATCAGTTTGCATTATTCCATCCCCGTGTTCT
TTCTTGTCCTTCCCCCACCGTCCAGATCCATCCCCCTCTCCCCCTCTGCG
ACGAGTGGACCCCCCGCCCGGCGCGCCCCGTGGAAAGCCTCCGGCCCTGG
AACGCACAGGACTCCCTGTCTTTCCGTCTACACACGTATTTGTGGACCGG
CTCGGGAGGGCTGACAA
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Coding sequence (CDS) from alignment at KK037254.1:312059..312825-

>rna9624 ID=rna9624|Name=rna9624|organism=Nannochloropsis gaditana|type=CDS|length=507bp|location=Sequence derived from alignment at KK037254.1:312059..312825- (Nannochloropsis gaditana)
ATGACTCCCCGTTTCAATTCCCCATTTGCACGCAGACGGGATCATGGCCG
TGGAAACTTCCGCACATTCCACACCCGAGACTTTGACAAAGCACGCAGCG
GAGGGACCTTAACATCGCAGCCCATATACCCCAAACGAAAGCACAACACA
AACACCAAAGTACCCAGTATAAAAGCTTCCGCTGTCGCGCCAGCAGATAT
GGCGTCCAATTTCTCCACAGAATCAGAAATGGAAAAGTCTCCGGCCAAGT
TGGGTTTAAAAGAGGAGGAATACGATCGCTTGGTGCATGTGCACGCCTTC
CGCCAGCGCCACCTCCGGACAATGACTGGGGTAGGGCGACGAGAACAGAG
ACTCCGTCGACTACACATTGACAGAGCAATAGCGGGCAGCGGGGAAAAAG
GCGCATATCTGTGCGAGCTCCCCGAGAAAGATGAGGTGCGGGGCAGGGTT
TCCCACCCAAACAGTCCTTTCACCCTATCCCCTCTCTTCTGTGTTCAGGG
ATCTTGA
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Synonyms
Publications