EWM21080.1, cds9593 (CDS) Nannochloropsis gaditana

Overview
NameEWM21080.1
Unique Namecds9593
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:312319..312825 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21080.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101517g1.10610.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:312319..312825 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21080.1 vs. NCBI_GenBank
Match: gi|585101131|gb|EWM21080.1| (hypothetical protein Naga_101517g1 [Nannochloropsis gaditana])

HSP 1 Score: 348.206 bits (892), Expect = 2.098e-121
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 
Query:    1 MTPRFNSPFARRRDHGRGNFRTFHTRDFDKARSGGTLTSQPIYPKRKHNTNTKVPSIKASAVAPADMASNFSTESEMEKSPAKLGLKEEEYDRLVHVHAFRQRHLRTMTGVGRREQRLRRLHIDRAIAGSGEKGAYLCELPEKDEVRGRVSHPNSPFTLSPLFCVQGS 168
            MTPRFNSPFARRRDHGRGNFRTFHTRDFDKARSGGTLTSQPIYPKRKHNTNTKVPSIKASAVAPADMASNFSTESEMEKSPAKLGLKEEEYDRLVHVHAFRQRHLRTMTGVGRREQRLRRLHIDRAIAGSGEKGAYLCELPEKDEVRGRVSHPNSPFTLSPLFCVQGS
Sbjct:    1 MTPRFNSPFARRRDHGRGNFRTFHTRDFDKARSGGTLTSQPIYPKRKHNTNTKVPSIKASAVAPADMASNFSTESEMEKSPAKLGLKEEEYDRLVHVHAFRQRHLRTMTGVGRREQRLRRLHIDRAIAGSGEKGAYLCELPEKDEVRGRVSHPNSPFTLSPLFCVQGS 168
The following BLAST results are available for this feature:
BLAST of EWM21080.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101131|gb|EWM21080.1|2.098e-121100.00hypothetical protein Naga_101517g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9624rna9624Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications