rna9621, rna9621 (mRNA) Nannochloropsis gaditana

Overview
Namerna9621
Unique Namerna9621
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1210
Alignment locationKK037254.1:300161..300813 -

Link to JBrowse

Properties
Property NameValue
Productformate-tetrahydrofolate ligase
Orig transcript idgnl|cribi|Naga_101504g3.3536.mrna
Orig protein idgnl|cribi|Naga_101504g3.3536
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:300161..300813 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101504g3gene9340Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9621rna9621-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21084.1cds9590Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9621 ID=rna9621|Name=rna9621|organism=Nannochloropsis gaditana|type=mRNA|length=1210bp
TCCTCCCTCTCCCTCTCCCTCTCCCTCGGTGGGCACCGGAAATCCCAGCA
CGTCATCAAGAAGCCCGTCTTGACCGCTCCCTCTCCCCCTCCCTCTTCCC
CTCCCTCCCACGCCTCCTCCCCTCCTTCCTCCTCGACCGGCTTCCGAGCC
CTCTTAGAGGCGGTCCTCTGGGGAGAGGGGGAGAGGGAGGACGCGAAGGA
GGGCGGGAAGGAGGGCGGGACGGAGGGCGGGACGGAGGGCGGGCCCCGCT
TCACTCTGCCGGACGGACGAGACCTCGTCGCGGGGGTGAAGGTGGCGAGT
AAGGTGGCCTGGGAGATGCTATCTTCCACCCTCTGTGCCCTCCTCCTCCA
CCTCCTGCGCCGCCTTCCCTTTGTCCCCGAGCCCATCGGCCGCCAGCATT
GGGGGAGATGGGAGAGGGAGTAGGGGGAAAGGGAGGAAGGGAGGGAGGGA
GGGAGGGGAGGGGGGGGAGATAGGATAGATAGAAAGACTGACATGAGCAC
ATTGAGCACAAAGCAGGCAATTTTGAAGGAAGACGTTGTTGTGGATAGGG
AGGGGGGTTGTGCAGAAGAGATGTAGGGATATTTGTGTAGAGGCGGTGGA
GAGGGAGGGCAGGGTAGACAGACTTGGAGTGGTAGCGGGCGGAAGGGGGA
AAAGGAGTCCGGAGATAGAGAGCGTCTTGGAGTAGAGATCGTGGGGTGTG
GAAGGAAGGCAGGGGCTAGGAGGAGGGGGAGGGCAGCGTGGCGGCCCTCG
GACGCCTCTGTGACGGGGTGGGGGGTGTCGCGGGGCAGAGAGGAAGGAGG
AAGAAGAGGGTAGGGAACAGGAAAGGCAGCTCCTGGGAGCGCACTCCACG
TCCGCGTCGATGTGGTTTTCCTCCCCACATGACAAGCGACGAGGTGGATG
GCTATATGTATGGTATGACCCAGAGGTTGGAGACGGGTACCGCAGGAGCT
GAGCTTCAGGGCGGGGCGGTGAATCGCAGTCATACTCAGAGGGAGGGCGG
AGGGCCCATACGCAAAGGAGCTCCTAGTCTTTCGAGTGGTGGCGAGCACA
GGGAAAGGAGGGATGATGTTGGCATTGCGCGGACGGGGAAGATCGTCGAT
GTGGATACAAAATAGCCGAAGAATGCGGGGCTCCTCTTTGGGATCATCGA
GTCAGTTGTCGCTCTAGATTGCGTTCAAGTTTGCCCGGCGTGTAACTTGC
TCCACACACC
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protein sequence of rna9621

>rna9621-protein ID=rna9621-protein|Name=rna9621|organism=Nannochloropsis gaditana|type=polypeptide|length=103bp
MYGGDGVEYSEVAEEQIKAYEAAGFGHLPMCVAKTQYSLSCDATAKGVPT
GFKVAVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIV
GLF
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mRNA from alignment at KK037254.1:300161..300813-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9621 ID=rna9621|Name=rna9621|organism=Nannochloropsis gaditana|type=mRNA|length=653bp|location=Sequence derived from alignment at KK037254.1:300161..300813- (Nannochloropsis gaditana)
CTCCCTCCAGGAGAAACTCGAGACCATCGTGCGCGAGATGTACGGCGGGG
ACGGCGTGGAGTATTCGGAGGTGGCGGAGGAGCAGATCAAAGCCTACGAG
GCTGCGGGGTTCGGGCACCTCCCCATGTGTGTGGCCAAGACCCAGTACTC
TCTCTCCTGCGATGCCACCGCCAAAGGTATGGATGTCGCCCCGCCCTCCC
TCCCGCTCTCCCTCCCTTCCAGAGTACTTTCCCCCCCAAGCCCTTGCTGT
CTGTGTCTGTCCCAAGATTCTCCCTGCCCTGCCTCCTTGGGACCTACCAT
CATGCACGTTCCCCCCCTCCCCAGGCGTCCCCACGGGCTTCAAAGTCGCC
GTCCGCGAGATCCGAGCCTGCGTCGGGGCAGGCTTCCTGTACGCGTTGGC
GGGAGACATCATGACCATCCCCGGATTGCCGACGCGCCCGGGCTTTTACG
ACGTGGACATCGACTTTGCCACGGGGAGGATCGTCGGCTTGTTCTGAGCG
TGCAGGAGGCGGTGAAAGGGGAAGGAGAAATAATGGGCCGGAGCTGAAAG
GGCAGGGGAGGATGGGGGGCTGGTTTTTAAAATAACCCGTCGGACGAGCT
CGGTGCTTCTTGTTTCCTTTCCTTTTGCCCTCTTGGCGCCAGAAGATAGT
GCG
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Coding sequence (CDS) from alignment at KK037254.1:300161..300813-

>rna9621 ID=rna9621|Name=rna9621|organism=Nannochloropsis gaditana|type=CDS|length=624bp|location=Sequence derived from alignment at KK037254.1:300161..300813- (Nannochloropsis gaditana)
GCGTCCCCACGGGCTTCAAAGTCGCCGTCCGCGAGATCCGAGCCTGCGTC
GGGGCAGGCTTCCTGTACGCGTTGGCGGGAGACATCATGACCATCCCCGG
ATTGCCGACGCGCCCGGGCTTTTACGACGTGGACATCGACTTTGCCACGG
GGAGGATCGTCGGCTTGTTCTGAATGTACGGCGGGGACGGCGTGGAGTAT
TCGGAGGTGGCGGAGGAGCAGATCAAAGCCTACGAGGCTGCGGGGTTCGG
GCACCTCCCCATGTGTGTGGCCAAGACCCAGTACTCTCTCTCCTGCGATG
CCACCGCCAAAGGCGTCCCCACGGGCTTCAAAGTCGCCGTCCGCGAGATC
CGAGCCTGCGTCGGGGCAGGCTTCCTGTACGCGTTGGCGGGAGACATCAT
GACCATCCCCGGATTGCCGACGCGCCCGGGCTTTTACGACGTGGACATCG
ACTTTGCCACGGGGAGGATCGTCGGCTTGTTCTGAATGTACGGCGGGGAC
GGCGTGGAGTATTCGGAGGTGGCGGAGGAGCAGATCAAAGCCTACGAGGC
TGCGGGGTTCGGGCACCTCCCCATGTGTGTGGCCAAGACCCAGTACTCTC
TCTCCTGCGATGCCACCGCCAAAG
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Synonyms
Publications