rna9616, rna9616 (mRNA) Nannochloropsis gaditana

Overview
Namerna9616
Unique Namerna9616
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length747
Alignment locationKK037254.1:291083..292191 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101238g2.4627.mrna
Orig protein idgnl|cribi|Naga_101238g2.4627
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:291083..292191 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101238g2gene9335Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9616rna9616-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21088.1cds9585Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9616 ID=rna9616|Name=rna9616|organism=Nannochloropsis gaditana|type=mRNA|length=747bp
CGTCCGGTGTTTGTGGCTTTGGTCCTGGAAATGGCTCTGGGACGCCCCCC
CTCCTCCTTGTTCTCACTCGCTTAAGAAGCACGCTTGCCCTTCAATATCA
ACCTGGCTCCAACCGCAATCTGCGCCCCTCCCCACCCTCATACTTCACGC
ACATCGCACAGGCGACAGCGCCGCACCGAGGACGTCGAGTGAGACGTAGA
AGCGAGGCGAGGTGTCCACTACTTTTGTCCTTACGTGGAACAGTCCTGTC
AACGAGCATTTCACTTCCAGCTCTCCATTATCCTTCACTCCCCCATGCTC
CTCCAACGCGCCCCTTCCATCCTCCTTGCGGGCGGCCGCAAAGCTTTAAC
ACGCCCAGGACGTATCCTTGTAGACAATACTCCACGTCGTGTAACTGAGA
CTGTTCCAACCATGGCACACACTGCGGCGCTCATGGCACGCGGGTGTGGA
GCCAGGCCGTCTCTCTTCATGCCCGTCCTGACCAATCCGGTTCGCACCTT
CTCCGTGGGCTTTGGGGGCCTCCAGTACGACACTCTCACGGAGATGCAGG
AGAAGGCGTGCAAACGCTACGGCCCCAAACCCTTCCTGGGATGCCGACCT
CCCAACGGCGGGCCCTTCGAGTTCATCACCTTCAGCGACTTTGACGAGCA
GGTCAACAGGGCGCGAGTCCTCTTACACGAGGCGGGCGTGGGGAGGGGCG
ACAAGGTGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
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protein sequence of rna9616

>rna9616-protein ID=rna9616-protein|Name=rna9616|organism=Nannochloropsis gaditana|type=polypeptide|length=223bp
MRQPRLHPQHHGGLLPRAANLQLRRLRGEGAHHHPVPGLFRTFLGRGHGE
KRGGRIEDDRGLQGHDGIGGKREGRGGEGRRTSLALKDGRKTGQLHSVRM
IARYRVEEAFLGGSVGGGLCACISHGRLVSLACGDSLEREDKVRQRGSCI
AASKYISNCTLTISPYRAPQPGVAFFFVGLNALISKSPLILPTEKSLQSS
FSFGMFAFGYLSIEMRNFHNTQQ
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mRNA from alignment at KK037254.1:291083..292191-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9616 ID=rna9616|Name=rna9616|organism=Nannochloropsis gaditana|type=mRNA|length=1109bp|location=Sequence derived from alignment at KK037254.1:291083..292191- (Nannochloropsis gaditana)
TCCCTCCAGGCCCGCGCCTGCAATTTCTGGGATGACAACGCCATTTTCTT
ACCCCTGGAGTCGGACCGCGTGGAGCCCGCCAAATCCATCACCGTCGTCA
TCCGCAAGTAGGTCAATGATCCTCTCAGGCGCCCCAAGCCATCCACTCCC
TGCCTCTGCCCCGCCCTTTCCCTCTCTGCCTTCCCGCCTCATACGCGAGG
AAGCACGCCAGATGTCCTTGACCTTCCCTCCCTCCCTCCCTCTCTCCCTC
CCTCCCTCCTTCCAGCGTGCTCGCCCACGGTCCTCAGACGGGAGGAGCCG
CCTCTCGCGCCTGCGCCAAGGGCCCTGAATGCGGCAACCCCGCCTTCATC
CGCAACATCATGGGGGACTACTACCCCGGTAAGGAGGGGAAGGAGGAGGG
GGCGGGGGGGAAGGGGAGGGTGCTTCCGTCCTAGGTAAGACCGTTGACGG
GGTCAACGGCTCCCTCCCCCTCATCGCCCTCCCACAGAGCTGCAAATCTA
CAACTGCGACGCTTGCGAGGGGAGGGAGCCCATCATCACCCAGTACCCGG
ACTATTTCGGACATTCCTAGGCCGAGGGCACGGAGAAAAGCGTGGGGGGA
GGATTGAGGACGATAGAGGACTTCAGGGGCATGATGGGATTGGAGGGAAG
AGGGAGGGGAGGGGAGGAGAGGGAAGGAGGACGTCGCTCGCCTTGAAAGA
CGGGCGCAAGACAGGGCAGCTTCATTCTGTGAGGATGATAGCGAGATATA
GGGTGGAGGAAGCGTTTTTGGGAGGGAGCGTGGGAGGAGGCTTGTGTGCA
TGTATCAGTCACGGCCGCCTCGTAAGTCTCGCGTGTGGGGATAGTCTGGA
AAGGGAGGACAAGGTAAGACAAAGAGGAAGCTGCATTGCTGCTTCGAAAT
ATATTTCAAATTGTACACTAACTATTTCACCATATCGGGCCCCGCAGCCT
GGAGTGGCCTTCTTTTTTGTTGGTCTTAACGCATTAATTAGCAAAAGTCC
ACTGATACTTCCGACAGAAAAGTCCTTGCAATCGAGTTTTTCCTTTGGCA
TGTTTGCTTTTGGATACCTATCGATCGAAATGCGAAACTTTCACAATACA
CAACAATGA
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Coding sequence (CDS) from alignment at KK037254.1:291083..292191-

>rna9616 ID=rna9616|Name=rna9616|organism=Nannochloropsis gaditana|type=CDS|length=1344bp|location=Sequence derived from alignment at KK037254.1:291083..292191- (Nannochloropsis gaditana)
AGCTGCAAATCTACAACTGCGACGCTTGCGAGGGGAGGGAGCCCATCATC
ACCCAGTACCCGGACTATTTCGGACATTCCTAGGCCGAGGGCACGGAGAA
AAGCGTGGGGGGAGGATTGAGGACGATAGAGGACTTCAGGGGCATGATGG
GATTGGAGGGAAGAGGGAGGGGAGGGGAGGAGAGGGAAGGAGGACGTCGC
TCGCCTTGAAAGACGGGCGCAAGACAGGGCAGCTTCATTCTGTGAGGATG
ATAGCGAGATATAGGGTGGAGGAAGCGTTTTTGGGAGGGAGCGTGGGAGG
AGGCTTGTGTGCATGTATCAGTCACGGCCGCCTCGTAAGTCTCGCGTGTG
GGGATAGTCTGGAAAGGGAGGACAAGGTAAGACAAAGAGGAAGCTGCATT
GCTGCTTCGAAATATATTTCAAATTGTACACTAACTATTTCACCATATCG
GGCCCCGCAGCCTGGAGTGGCCTTCTTTTTTGTTGGTCTTAACGCATTAA
TTAGCAAAAGTCCACTGATACTTCCGACAGAAAAGTCCTTGCAATCGAGT
TTTTCCTTTGGCATGTTTGCTTTTGGATACCTATCGATCGAAATGCGAAA
CTTTCACAATACACAACAATGAATGCGGCAACCCCGCCTTCATCCGCAAC
ATCATGGGGGACTACTACCCCGAGCTGCAAATCTACAACTGCGACGCTTG
CGAGGGGAGGGAGCCCATCATCACCCAGTACCCGGACTATTTCGGACATT
CCTAGGCCGAGGGCACGGAGAAAAGCGTGGGGGGAGGATTGAGGACGATA
GAGGACTTCAGGGGCATGATGGGATTGGAGGGAAGAGGGAGGGGAGGGGA
GGAGAGGGAAGGAGGACGTCGCTCGCCTTGAAAGACGGGCGCAAGACAGG
GCAGCTTCATTCTGTGAGGATGATAGCGAGATATAGGGTGGAGGAAGCGT
TTTTGGGAGGGAGCGTGGGAGGAGGCTTGTGTGCATGTATCAGTCACGGC
CGCCTCGTAAGTCTCGCGTGTGGGGATAGTCTGGAAAGGGAGGACAAGGT
AAGACAAAGAGGAAGCTGCATTGCTGCTTCGAAATATATTTCAAATTGTA
CACTAACTATTTCACCATATCGGGCCCCGCAGCCTGGAGTGGCCTTCTTT
TTTGTTGGTCTTAACGCATTAATTAGCAAAAGTCCACTGATACTTCCGAC
AGAAAAGTCCTTGCAATCGAGTTTTTCCTTTGGCATGTTTGCTTTTGGAT
ACCTATCGATCGAAATGCGAAACTTTCACAATACACAACAATGAATGCGG
CAACCCCGCCTTCATCCGCAACATCATGGGGGACTACTACCCCG
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Synonyms
Publications